RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 MALLQ13021 153 aa4.13□□□□□ -1.75
RNU6-550P-201ENST00000391057 PTPN21Q16825 1174 aa4.13□□□□□ -1.75
RNU6-550P-201ENST00000391057 FKBP15Q5T1M5 1219 aa4.13□□□□□ -1.75
RNU6-550P-201ENST00000391057 MFSD5Q6N075 450 aa4.13□□□□□ -1.75
RNU6-550P-201ENST00000391057 PRRT2Q7Z6L0 340 aaPredicted RBP4.13□□□□□ -1.75
RNU6-550P-201ENST00000391057 PNMA8AQ86V59 439 aaPredicted RBP4.13□□□□□ -1.75
RNU6-550P-201ENST00000391057 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.13□□□□□ -1.75
RNU6-550P-201ENST00000391057 GPR156Q8NFN8 814 aa4.13□□□□□ -1.75
RNU6-550P-201ENST00000391057 RIN2Q8WYP3 895 aaPredicted RBP4.13□□□□□ -1.75
RNU6-550P-201ENST00000391057 DVL3Q92997 716 aaPredicted RBP4.13□□□□□ -1.75
RNU6-550P-201ENST00000391057 FAM89AQ96GI7 184 aa4.13□□□□□ -1.75
RNU6-550P-201ENST00000391057 CEP89Q96ST8 783 aa4.13□□□□□ -1.75
RNU6-550P-201ENST00000391057 KLC2Q9H0B6 622 aa4.13□□□□□ -1.75
RNU6-550P-201ENST00000391057 EPC1Q9H2F5 836 aa4.13□□□□□ -1.75
RNU6-550P-201ENST00000391057 DMRT3Q9NQL9 472 aa4.13□□□□□ -1.75
RNU6-550P-201ENST00000391057 DDX56Q9NY93 547 aaKnown RBP4.13□□□□□ -1.75
RNU6-550P-201ENST00000391057 GPRC5DQ9NZD1 345 aa4.13□□□□□ -1.75
RNU6-550P-201ENST00000391057 DNM3Q9UQ16 869 aa4.13□□□□□ -1.75
RNU6-550P-201ENST00000391057 SPEF1Q9Y4P9 236 aa4.13□□□□□ -1.75
RNU6-550P-201ENST00000391057 PCDHGA2Q9Y5H1 932 aa4.13□□□□□ -1.75
RNU6-550P-201ENST00000391057 NCANO14594 1321 aa4.13□□□□□ -1.75
RNU6-550P-201ENST00000391057 KRTAP9-7A8MTY7 169 aa4.12□□□□□ -1.75
RNU6-550P-201ENST00000391057 FZD9O00144 591 aa4.12□□□□□ -1.75
RNU6-550P-201ENST00000391057 PRRG2O14669 202 aa4.12□□□□□ -1.75
RNU6-550P-201ENST00000391057 MUSKO15146 869 aa4.12□□□□□ -1.75
RNU6-550P-201ENST00000391057 ITGA10O75578 1167 aa4.12□□□□□ -1.75
RNU6-550P-201ENST00000391057 ACO1P21399 889 aaKnown RBP4.12□□□□□ -1.75
RNU6-550P-201ENST00000391057 ECHS1P30084 290 aa4.12□□□□□ -1.75
RNU6-550P-201ENST00000391057 ADSLP30566 484 aaPredicted RBP4.12□□□□□ -1.75
RNU6-550P-201ENST00000391057 KRT85P78386 507 aa4.12□□□□□ -1.75
RNU6-550P-201ENST00000391057 ADAM17P78536 824 aa4.12□□□□□ -1.75
RNU6-550P-201ENST00000391057 PCBP2Q15366 365 aaKnown RBP eCLIP4.12□□□□□ -1.75
RNU6-550P-201ENST00000391057 ELAVL1Q15717 326 aaKnown RBP4.12□□□□□ -1.75
RNU6-550P-201ENST00000391057 MST1LQ2TV78 715 aa4.12□□□□□ -1.75
RNU6-550P-201ENST00000391057 PDZD4Q76G19 769 aaPredicted RBP4.12□□□□□ -1.75
RNU6-550P-201ENST00000391057 SGMS1Q86VZ5 419 aa4.12□□□□□ -1.75
RNU6-550P-201ENST00000391057 ANKRD35Q8N283 1001 aa4.12□□□□□ -1.75
RNU6-550P-201ENST00000391057 ZNF808Q8N4W9 903 aaPredicted RBP4.12□□□□□ -1.75
RNU6-550P-201ENST00000391057 JADE3Q92613 823 aa4.12□□□□□ -1.75
RNU6-550P-201ENST00000391057 IL17RAQ96F46 866 aa4.12□□□□□ -1.75
RNU6-550P-201ENST00000391057 ZNF512Q96ME7 567 aaPredicted RBP4.12□□□□□ -1.75
RNU6-550P-201ENST00000391057 WWC2-AS2Q96NR7 200 aa4.12□□□□□ -1.75
RNU6-550P-201ENST00000391057 SLC2A13Q96QE2 648 aa4.12□□□□□ -1.75
RNU6-550P-201ENST00000391057 ADOQ96SZ5 270 aa4.12□□□□□ -1.75
RNU6-550P-201ENST00000391057 CDK5RAP1Q96SZ6 601 aaKnown RBP4.12□□□□□ -1.75
RNU6-550P-201ENST00000391057 UHRF1Q96T88 793 aaPredicted RBP4.12□□□□□ -1.75
RNU6-550P-201ENST00000391057 CDC5LQ99459 802 aaKnown RBP4.12□□□□□ -1.75
RNU6-550P-201ENST00000391057 ENKD1Q9H0I2 346 aa4.12□□□□□ -1.75
RNU6-550P-201ENST00000391057 RBM12Q9NTZ6 932 aaKnown RBP4.12□□□□□ -1.75
RNU6-550P-201ENST00000391057 SCOCQ9UIL1 159 aa4.12□□□□□ -1.75
RNU6-550P-201ENST00000391057 JAG2Q9Y219 1238 aa4.12□□□□□ -1.75
RNU6-550P-201ENST00000391057 SH3BP1Q9Y3L3 701 aa4.12□□□□□ -1.75
RNU6-550P-201ENST00000391057 TNKSO95271 1327 aa4.12□□□□□ -1.75
RNU6-550P-201ENST00000391057 FAM171A2A8MVW0 826 aa4.11□□□□□ -1.75
RNU6-550P-201ENST00000391057 CYP27B1O15528 508 aa4.11□□□□□ -1.75
RNU6-550P-201ENST00000391057 PCDHGA12O60330 932 aa4.11□□□□□ -1.75
RNU6-550P-201ENST00000391057 NDUFS2O75306 463 aa4.11□□□□□ -1.75
RNU6-550P-201ENST00000391057 GASTP01350 101 aa4.11□□□□□ -1.75
RNU6-550P-201ENST00000391057 PDGFRBP09619 1106 aa4.11□□□□□ -1.75
RNU6-550P-201ENST00000391057 ZNF20P17024 532 aa4.11□□□□□ -1.75
RNU6-550P-201ENST00000391057 GNAT2P19087 354 aa4.11□□□□□ -1.75
RNU6-550P-201ENST00000391057 CRHR1P34998 444 aa4.11□□□□□ -1.75
RNU6-550P-201ENST00000391057 MCAMP43121 646 aa4.11□□□□□ -1.75
RNU6-550P-201ENST00000391057 GZMKP49863 264 aa4.11□□□□□ -1.75
RNU6-550P-201ENST00000391057 SLC16A1P53985 500 aa4.11□□□□□ -1.75
RNU6-550P-201ENST00000391057 MRPL49Q13405 166 aaKnown RBP4.11□□□□□ -1.75
RNU6-550P-201ENST00000391057 PRKD1Q15139 912 aaPredicted RBP4.11□□□□□ -1.75
RNU6-550P-201ENST00000391057 NOMO1Q15155 1222 aa4.11□□□□□ -1.75
RNU6-550P-201ENST00000391057 FAM214AQ32MH5 1076 aa4.11□□□□□ -1.75
RNU6-550P-201ENST00000391057 MAMDC4Q6UXC1 1216 aa4.11□□□□□ -1.75
RNU6-550P-201ENST00000391057 ZBTB46Q86UZ6 589 aa4.11□□□□□ -1.75
RNU6-550P-201ENST00000391057 PALM2Q8IXS6 379 aa4.11□□□□□ -1.75
RNU6-550P-201ENST00000391057 PPM1NQ8N819 430 aa4.11□□□□□ -1.75
RNU6-550P-201ENST00000391057 EDAQ92838 391 aa4.11□□□□□ -1.75
RNU6-550P-201ENST00000391057 TEKT5Q96M29 485 aa4.11□□□□□ -1.75
RNU6-550P-201ENST00000391057 SLC13A1Q9BZW2 595 aa4.11□□□□□ -1.75
RNU6-550P-201ENST00000391057 SAP30BPQ9UHR5 308 aaKnown RBP4.11□□□□□ -1.75
RNU6-550P-201ENST00000391057 PCDHGA9Q9Y5G4 932 aaKnown RBP4.11□□□□□ -1.75
RNU6-550P-201ENST00000391057 PCDHGA8Q9Y5G5 932 aa4.11□□□□□ -1.75
RNU6-550P-201ENST00000391057 PCDHGA7Q9Y5G6 932 aa4.11□□□□□ -1.75
RNU6-550P-201ENST00000391057 PCDHGA6Q9Y5G7 932 aa4.11□□□□□ -1.75
RNU6-550P-201ENST00000391057 PCDHGA3Q9Y5H0 932 aa4.11□□□□□ -1.75
RNU6-550P-201ENST00000391057 MFAP3LO75121 409 aa4.1□□□□□ -1.75
RNU6-550P-201ENST00000391057 STC2O76061 302 aa4.1□□□□□ -1.75
RNU6-550P-201ENST00000391057 IPO13O94829 963 aaKnown RBP4.1□□□□□ -1.75
RNU6-550P-201ENST00000391057 ENDOD1O94919 500 aa4.1□□□□□ -1.75
RNU6-550P-201ENST00000391057 ADRB1P08588 477 aa4.1□□□□□ -1.75
RNU6-550P-201ENST00000391057 GSPT1P15170 499 aaKnown RBP4.1□□□□□ -1.75
RNU6-550P-201ENST00000391057 C5AR1P21730 350 aa4.1□□□□□ -1.75
RNU6-550P-201ENST00000391057 HIBADHP31937 336 aaKnown RBP4.1□□□□□ -1.75
RNU6-550P-201ENST00000391057 NEK2P51955 445 aa4.1□□□□□ -1.75
RNU6-550P-201ENST00000391057 PER3P56645 1201 aa4.1□□□□□ -1.75
RNU6-550P-201ENST00000391057 APBA1Q02410 837 aa4.1□□□□□ -1.75
RNU6-550P-201ENST00000391057 PPP3CAQ08209 521 aa4.1□□□□□ -1.75
RNU6-550P-201ENST00000391057 MGAT2Q10469 447 aa4.1□□□□□ -1.75
RNU6-550P-201ENST00000391057 PRAMEF14Q5SWL7 426 aa4.1□□□□□ -1.75
RNU6-550P-201ENST00000391057 EFCAB2Q5VUJ9 269 aa4.1□□□□□ -1.75
RNU6-550P-201ENST00000391057 Q6ZSN1 163 aa4.1□□□□□ -1.75
RNU6-550P-201ENST00000391057 APBB1IPQ7Z5R6 666 aaPredicted RBP4.1□□□□□ -1.75
RNU6-550P-201ENST00000391057 ANKRD13AQ8IZ07 590 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms