RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 SKIP12755 728 aa20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 SREBF1P36956 1147 aa20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 MSH2P43246 934 aa20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 PSMC6P62333 389 aa20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 LAMB3Q13751 1172 aa20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 VWA3BQ502W6 1294 aa20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 CYFIP1Q7L576 1253 aa20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 MXRA8Q9BRK3 442 aa20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 COL22A1Q8NFW1 1626 aaPredicted RBP20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 AGPSO00116 658 aa20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 CHN1P15882 459 aa20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 TNFAIP3P21580 790 aa20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 GBP7Q8N8V2 638 aaPredicted RBP20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 U2AF1L4Q8WU68 220 aaKnown RBP20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 HSD3B7Q9H2F3 369 aa20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 MTUS1Q9ULD2 1270 aa20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 RSPH10B2B2RC85 870 aa20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 RAD51CO43502 376 aa20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 LRRN2O75325 713 aa20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 RSPH10BP0C881 870 aa20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 SRGAP2CP0DJJ0 459 aa20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 CCND1P24385 295 aa20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 EPHA7Q15375 998 aa20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 NPY5RQ15761 445 aa20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 TNFRSF25Q93038 417 aa20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 METTL14Q9HCE5 456 aaKnown RBP20.21■□□□□ 0.83
PPFIA1-202ENST00000389547 RPA1P27694 616 aa20.2■□□□□ 0.82
PPFIA1-202ENST00000389547 GJC1P36383 396 aa20.2■□□□□ 0.82
PPFIA1-202ENST00000389547 PAPOLAP51003 745 aaKnown RBP20.2■□□□□ 0.82
PPFIA1-202ENST00000389547 JAG1P78504 1218 aa20.2■□□□□ 0.82
PPFIA1-202ENST00000389547 LLGL1Q15334 1064 aa20.2■□□□□ 0.82
PPFIA1-202ENST00000389547 PLA2G4FQ68DD2 849 aa20.2■□□□□ 0.82
PPFIA1-202ENST00000389547 FAM47EQ6ZV65 393 aa20.2■□□□□ 0.82
PPFIA1-202ENST00000389547 KCNK18Q7Z418 384 aa20.2■□□□□ 0.82
PPFIA1-202ENST00000389547 ANKRD13AQ8IZ07 590 aa20.2■□□□□ 0.82
PPFIA1-202ENST00000389547 GIMAP8Q8ND71 665 aaPredicted RBP20.2■□□□□ 0.82
PPFIA1-202ENST00000389547 FGD4Q96M96 766 aa20.2■□□□□ 0.82
PPFIA1-202ENST00000389547 AMACRQ9UHK6 382 aa20.2■□□□□ 0.82
PPFIA1-202ENST00000389547 INTUQ9ULD6 942 aa20.2■□□□□ 0.82
PPFIA1-202ENST00000389547 INO80B-WBP1J3KQ70 363 aa20.2■□□□□ 0.82
PPFIA1-202ENST00000389547 MEIS2O14770 477 aa20.2■□□□□ 0.82
PPFIA1-202ENST00000389547 RASGRF2O14827 1237 aa20.2■□□□□ 0.82
PPFIA1-202ENST00000389547 EIF3BP55884 814 aaKnown RBP20.2■□□□□ 0.82
PPFIA1-202ENST00000389547 IWS1Q96ST2 819 aa20.2■□□□□ 0.82
PPFIA1-202ENST00000389547 INO80BQ9C086 356 aaPredicted RBP20.2■□□□□ 0.82
PPFIA1-202ENST00000389547 KBTBD4Q9NVX7 518 aa20.2■□□□□ 0.82
PPFIA1-202ENST00000389547 FBXO40Q9UH90 709 aa20.2■□□□□ 0.82
PPFIA1-202ENST00000389547 RRP1BQ14684 758 aaKnown RBP20.2■□□□□ 0.82
PPFIA1-202ENST00000389547 ZC2HC1CQ53FD0 456 aaPredicted RBP20.2■□□□□ 0.82
PPFIA1-202ENST00000389547 TMEM154Q6P9G4 183 aa20.2■□□□□ 0.82
PPFIA1-202ENST00000389547 SMC6Q96SB8 1091 aa20.2■□□□□ 0.82
PPFIA1-202ENST00000389547 PRMT1Q99873 361 aaKnown RBP20.2■□□□□ 0.82
PPFIA1-202ENST00000389547 KIAA1683Q9H0B3 1180 aa20.2■□□□□ 0.82
PPFIA1-202ENST00000389547 DLGAP2Q9P1A6 1054 aa20.2■□□□□ 0.82
PPFIA1-202ENST00000389547 ABT1Q9ULW3 272 aaKnown RBP20.2■□□□□ 0.82
PPFIA1-202ENST00000389547 A0A1W2PQC6 194 aa20.19■□□□□ 0.82
PPFIA1-202ENST00000389547 EYA4O95677 639 aa20.19■□□□□ 0.82
PPFIA1-202ENST00000389547 KRT19P08727 400 aa20.19■□□□□ 0.82
PPFIA1-202ENST00000389547 PSMC2P35998 433 aaKnown RBP20.19■□□□□ 0.82
PPFIA1-202ENST00000389547 HSD17B3P37058 310 aa20.19■□□□□ 0.82
PPFIA1-202ENST00000389547 VPS41P49754 854 aa20.19■□□□□ 0.82
PPFIA1-202ENST00000389547 AMPD2Q01433 879 aa20.19■□□□□ 0.82
PPFIA1-202ENST00000389547 KRT76Q01546 638 aa20.19■□□□□ 0.82
PPFIA1-202ENST00000389547 WDR44Q5JSH3 913 aa20.19■□□□□ 0.82
PPFIA1-202ENST00000389547 YTHDF3Q7Z739 585 aaKnown RBP20.19■□□□□ 0.82
PPFIA1-202ENST00000389547 FAM133AQ8N9E0 248 aa20.19■□□□□ 0.82
PPFIA1-202ENST00000389547 SPEF2Q9C093 1822 aa20.19■□□□□ 0.82
PPFIA1-202ENST00000389547 FDX1P10109 184 aa20.19■□□□□ 0.82
PPFIA1-202ENST00000389547 CASKIN2Q8WXE0 1202 aa20.19■□□□□ 0.82
PPFIA1-202ENST00000389547 NUDCD1Q96RS6 583 aa20.19■□□□□ 0.82
PPFIA1-202ENST00000389547 ZFATQ9P243 1243 aa20.19■□□□□ 0.82
PPFIA1-202ENST00000389547 TBK1Q9UHD2 729 aa20.19■□□□□ 0.82
PPFIA1-202ENST00000389547 SEL1L2Q5TEA6 688 aa20.19■□□□□ 0.82
PPFIA1-202ENST00000389547 SYT17Q9BSW7 474 aa20.19■□□□□ 0.82
PPFIA1-202ENST00000389547 SNX24Q9Y343 169 aa20.19■□□□□ 0.82
PPFIA1-202ENST00000389547 PCDHA10Q9Y5I2 948 aa20.19■□□□□ 0.82
PPFIA1-202ENST00000389547 ZBTB39O15060 712 aa20.18■□□□□ 0.82
PPFIA1-202ENST00000389547 PTPRAP18433 802 aa20.18■□□□□ 0.82
PPFIA1-202ENST00000389547 KNOP1Q1ED39 458 aaKnown RBP20.18■□□□□ 0.82
PPFIA1-202ENST00000389547 CFAP157Q5JU67 520 aa20.18■□□□□ 0.82
PPFIA1-202ENST00000389547 SYCE1Q8N0S2 351 aa20.18■□□□□ 0.82
PPFIA1-202ENST00000389547 RUBCNQ92622 972 aa20.18■□□□□ 0.82
PPFIA1-202ENST00000389547 TBX3O15119 743 aa20.18■□□□□ 0.82
PPFIA1-202ENST00000389547 STAT1P42224 750 aa20.18■□□□□ 0.82
PPFIA1-202ENST00000389547 OSTNP61366 133 aa20.18■□□□□ 0.82
PPFIA1-202ENST00000389547 SHISA4Q96DD7 197 aa20.18■□□□□ 0.82
PPFIA1-202ENST00000389547 NR3C1P04150 777 aa20.18■□□□□ 0.82
PPFIA1-202ENST00000389547 H2AFZP0C0S5 128 aa20.18■□□□□ 0.82
PPFIA1-202ENST00000389547 SNX1Q13596 522 aa20.18■□□□□ 0.82
PPFIA1-202ENST00000389547 H2AFVQ71UI9 128 aa20.18■□□□□ 0.82
PPFIA1-202ENST00000389547 TXLNGQ9NUQ3 528 aa20.18■□□□□ 0.82
PPFIA1-202ENST00000389547 MYH13Q9UKX3 1938 aa20.18■□□□□ 0.82
PPFIA1-202ENST00000389547 PTPN22Q9Y2R2 807 aa20.18■□□□□ 0.82
PPFIA1-202ENST00000389547 AFPP02771 609 aaKnown RBP20.17■□□□□ 0.82
PPFIA1-202ENST00000389547 KRT15P19012 456 aa20.17■□□□□ 0.82
PPFIA1-202ENST00000389547 ELF3P78545 371 aaPredicted RBP20.17■□□□□ 0.82
PPFIA1-202ENST00000389547 KLC1Q07866 573 aa20.17■□□□□ 0.82
PPFIA1-202ENST00000389547 FYB2Q5VWT5 728 aa20.17■□□□□ 0.82
PPFIA1-202ENST00000389547 SYTL5Q8TDW5 730 aaPredicted RBP20.17■□□□□ 0.82
PPFIA1-202ENST00000389547 SH3GL2Q99962 352 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms