RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 SPDYE2BA6NHP3 402 aa13.85□□□□□ -0.19
PTPRN2-203ENST00000389418 SPDYE6P0CI01 402 aa13.85□□□□□ -0.19
PTPRN2-203ENST00000389418 NUMBP49757 651 aa13.85□□□□□ -0.19
PTPRN2-203ENST00000389418 THOC5Q13769 683 aaKnown RBP13.85□□□□□ -0.19
PTPRN2-203ENST00000389418 EMBQ6PCB8 327 aa13.85□□□□□ -0.19
PTPRN2-203ENST00000389418 NUF2Q9BZD4 464 aa13.85□□□□□ -0.19
PTPRN2-203ENST00000389418 INTS9Q9NV88 658 aaKnown RBP13.85□□□□□ -0.19
PTPRN2-203ENST00000389418 RBAKQ9NYW8 714 aaPredicted RBP13.85□□□□□ -0.19
PTPRN2-203ENST00000389418 TLK1Q9UKI8 766 aa13.85□□□□□ -0.19
PTPRN2-203ENST00000389418 CCDC160A6NGH7 325 aa13.85□□□□□ -0.19
PTPRN2-203ENST00000389418 ADM5C9JUS6 153 aa13.85□□□□□ -0.19
PTPRN2-203ENST00000389418 GPC4O75487 556 aa13.85□□□□□ -0.19
PTPRN2-203ENST00000389418 MKRN4PQ13434 485 aaPredicted RBP13.85□□□□□ -0.19
PTPRN2-203ENST00000389418 STILQ15468 1287 aa13.85□□□□□ -0.19
PTPRN2-203ENST00000389418 ALS2CLQ60I27 953 aa13.85□□□□□ -0.19
PTPRN2-203ENST00000389418 CENPUQ71F23 418 aa13.85□□□□□ -0.19
PTPRN2-203ENST00000389418 C7orf25Q9BPX7 421 aa13.85□□□□□ -0.19
PTPRN2-203ENST00000389418 CNOT10Q9H9A5 744 aaKnown RBP13.85□□□□□ -0.19
PTPRN2-203ENST00000389418 TUBE1Q9UJT0 475 aa13.85□□□□□ -0.19
PTPRN2-203ENST00000389418 URB1O60287 2271 aaKnown RBP13.85□□□□□ -0.19
PTPRN2-203ENST00000389418 COL3A1P02461 1466 aaPredicted RBP13.85□□□□□ -0.19
PTPRN2-203ENST00000389418 KRT7P08729 469 aa13.85□□□□□ -0.19
PTPRN2-203ENST00000389418 ADORA2BP29275 332 aa13.85□□□□□ -0.19
PTPRN2-203ENST00000389418 CAV1Q03135 178 aa13.85□□□□□ -0.19
PTPRN2-203ENST00000389418 LRRC31Q6UY01 552 aa13.85□□□□□ -0.19
PTPRN2-203ENST00000389418 MYLK4Q86YV6 388 aaPredicted RBP13.85□□□□□ -0.19
PTPRN2-203ENST00000389418 DHX38Q92620 1227 aaKnown RBP13.85□□□□□ -0.19
PTPRN2-203ENST00000389418 ANAPC7Q9UJX3 599 aa13.85□□□□□ -0.19
PTPRN2-203ENST00000389418 NFU1Q9UMS0 254 aa13.85□□□□□ -0.19
PTPRN2-203ENST00000389418 PACSIN2Q9UNF0 486 aaPredicted RBP13.85□□□□□ -0.19
PTPRN2-203ENST00000389418 EVI5O60447 810 aa13.84□□□□□ -0.19
PTPRN2-203ENST00000389418 MOCS2O96007 188 aaPredicted RBP13.84□□□□□ -0.19
PTPRN2-203ENST00000389418 GH1P01241 217 aa13.84□□□□□ -0.19
PTPRN2-203ENST00000389418 CCT5P48643 541 aa13.84□□□□□ -0.19
PTPRN2-203ENST00000389418 SKIV2LQ15477 1246 aaKnown RBP13.84□□□□□ -0.19
PTPRN2-203ENST00000389418 KLC2Q9H0B6 622 aa13.84□□□□□ -0.19
PTPRN2-203ENST00000389418 CPA4Q9UI42 421 aa13.84□□□□□ -0.19
PTPRN2-203ENST00000389418 UBE4BO95155 1302 aa13.84□□□□□ -0.19
PTPRN2-203ENST00000389418 SUN1O94901 812 aa13.84□□□□□ -0.19
PTPRN2-203ENST00000389418 SDC4P31431 198 aa13.84□□□□□ -0.19
PTPRN2-203ENST00000389418 EPHX2P34913 555 aa13.84□□□□□ -0.19
PTPRN2-203ENST00000389418 DRAP1Q14919 205 aaPredicted RBP13.84□□□□□ -0.19
PTPRN2-203ENST00000389418 PCGF5Q86SE9 256 aa13.84□□□□□ -0.19
PTPRN2-203ENST00000389418 ADSSL1Q8N142 457 aa13.84□□□□□ -0.19
PTPRN2-203ENST00000389418 TNIP3Q96KP6 325 aa13.84□□□□□ -0.19
PTPRN2-203ENST00000389418 FMO2Q99518 471 aa13.84□□□□□ -0.19
PTPRN2-203ENST00000389418 IRX2Q9BZI1 471 aaPredicted RBP13.84□□□□□ -0.19
PTPRN2-203ENST00000389418 FHDC1Q9C0D6 1143 aaPredicted RBP13.84□□□□□ -0.19
PTPRN2-203ENST00000389418 ZFYVE28Q9HCC9 887 aa13.84□□□□□ -0.19
PTPRN2-203ENST00000389418 BAIAP2L1Q9UHR4 511 aa13.84□□□□□ -0.19
PTPRN2-203ENST00000389418 GOLGA4Q13439 2230 aaKnown RBP13.84□□□□□ -0.19
PTPRN2-203ENST00000389418 PNMA6AP0CW24 399 aaPredicted RBP13.84□□□□□ -0.19
PTPRN2-203ENST00000389418 DPYDQ12882 1025 aa13.84□□□□□ -0.19
PTPRN2-203ENST00000389418 ZNF211Q13398 564 aaPredicted RBP13.84□□□□□ -0.19
PTPRN2-203ENST00000389418 WDR72Q3MJ13 1102 aa13.84□□□□□ -0.19
PTPRN2-203ENST00000389418 ELMOD1Q8N336 334 aa13.84□□□□□ -0.19
PTPRN2-203ENST00000389418 KCNB2Q92953 911 aa13.84□□□□□ -0.19
PTPRN2-203ENST00000389418 INTS2Q9H0H0 1204 aaKnown RBP13.84□□□□□ -0.19
PTPRN2-203ENST00000389418 TBK1Q9UHD2 729 aa13.84□□□□□ -0.19
PTPRN2-203ENST00000389418 EMSYQ7Z589 1322 aa13.84□□□□□ -0.19
PTPRN2-203ENST00000389418 TRAPPC3O43617 180 aa13.83□□□□□ -0.19
PTPRN2-203ENST00000389418 CAP2P40123 477 aa13.83□□□□□ -0.19
PTPRN2-203ENST00000389418 KIF12Q96FN5 646 aa13.83□□□□□ -0.19
PTPRN2-203ENST00000389418 TNS2Q63HR2 1409 aa13.83□□□□□ -0.19
PTPRN2-203ENST00000389418 STK25O00506 426 aa13.83□□□□□ -0.2
PTPRN2-203ENST00000389418 EDRF1Q3B7T1 1238 aa13.83□□□□□ -0.2
PTPRN2-203ENST00000389418 RAPH1Q70E73 1250 aa13.83□□□□□ -0.2
PTPRN2-203ENST00000389418 SCFD2Q8WU76 684 aa13.83□□□□□ -0.2
PTPRN2-203ENST00000389418 VPS39Q96JC1 886 aa13.83□□□□□ -0.2
PTPRN2-203ENST00000389418 ZDHHC15Q96MV8 337 aa13.83□□□□□ -0.2
PTPRN2-203ENST00000389418 DDX4Q9NQI0 724 aaKnown RBP13.83□□□□□ -0.2
PTPRN2-203ENST00000389418 EPHB1P54762 984 aa13.83□□□□□ -0.2
PTPRN2-203ENST00000389418 TTC30AQ86WT1 665 aa13.83□□□□□ -0.2
PTPRN2-203ENST00000389418 HVCN1Q96D96 273 aa13.83□□□□□ -0.2
PTPRN2-203ENST00000389418 NUDCD1Q96RS6 583 aa13.83□□□□□ -0.2
PTPRN2-203ENST00000389418 CHP1Q99653 195 aa13.83□□□□□ -0.2
PTPRN2-203ENST00000389418 REEP2Q9BRK0 252 aa13.83□□□□□ -0.2
PTPRN2-203ENST00000389418 RTFDC1Q9BY42 306 aaPredicted RBP13.83□□□□□ -0.2
PTPRN2-203ENST00000389418 CYP26B1Q9NR63 512 aa13.83□□□□□ -0.2
PTPRN2-203ENST00000389418 KCNH7Q9NS40 1196 aa13.83□□□□□ -0.2
PTPRN2-203ENST00000389418 COL5A2P05997 1499 aaPredicted RBP13.83□□□□□ -0.2
PTPRN2-203ENST00000389418 HMGB1P1B2RPK0 211 aaPredicted RBP13.83□□□□□ -0.2
PTPRN2-203ENST00000389418 MT-ND3P03897 115 aa13.83□□□□□ -0.2
PTPRN2-203ENST00000389418 PHLDB3Q6NSJ2 640 aa13.83□□□□□ -0.2
PTPRN2-203ENST00000389418 ELOA2Q8IYF1 753 aaPredicted RBP13.83□□□□□ -0.2
PTPRN2-203ENST00000389418 ACAP3Q96P50 834 aa13.83□□□□□ -0.2
PTPRN2-203ENST00000389418 SUCLA2Q9P2R7 463 aaPredicted RBP13.83□□□□□ -0.2
PTPRN2-203ENST00000389418 HDAC6Q9UBN7 1215 aa13.83□□□□□ -0.2
PTPRN2-203ENST00000389418 IP6K2Q9UHH9 426 aa13.83□□□□□ -0.2
PTPRN2-203ENST00000389418 HEY1Q9Y5J3 304 aa13.83□□□□□ -0.2
PTPRN2-203ENST00000389418 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.83□□□□□ -0.2
PTPRN2-203ENST00000389418 MAP1BP46821 2468 aaKnown RBP13.82□□□□□ -0.2
PTPRN2-203ENST00000389418 PITPNM2Q9BZ72 1349 aa13.82□□□□□ -0.2
PTPRN2-203ENST00000389418 SRRM1Q8IYB3 904 aaKnown RBP13.82□□□□□ -0.2
PTPRN2-203ENST00000389418 VPS33BQ9H267 617 aa13.82□□□□□ -0.2
PTPRN2-203ENST00000389418 EPC1Q9H2F5 836 aa13.82□□□□□ -0.2
PTPRN2-203ENST00000389418 RRAGCQ9HB90 399 aa13.82□□□□□ -0.2
PTPRN2-203ENST00000389418 GPRC5CQ9NQ84 441 aa13.82□□□□□ -0.2
PTPRN2-203ENST00000389418 MYMKA6NI61 221 aa13.82□□□□□ -0.2
PTPRN2-203ENST00000389418 NFIBO00712 420 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms