RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 PDE5AO76074 875 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 GRIA2P42262 883 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 BCAMP50895 628 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 RTN1Q16799 776 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 CCDC153Q494R4 210 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 LRRC74BQ6ZQY2 392 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 KRT27Q7Z3Y8 459 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 CATIPQ7Z7H3 387 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 TBC1D10CQ8IV04 446 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 SP8Q8IXZ3 490 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 CASP10Q92851 521 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 SLC7A5P2Q9GIP4 190 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 SYNCQ9H7C4 482 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 EPB41L4AQ9HCS5 686 aaPredicted RBP8.01□□□□□ -1.13
CDKL5-201ENST00000379989 DDX43Q9NXZ2 648 aaKnown RBP8.01□□□□□ -1.13
CDKL5-201ENST00000379989 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.01□□□□□ -1.13
CDKL5-201ENST00000379989 NAV1Q8NEY1 1877 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 DDX60LQ5H9U9 1706 aaKnown RBP8.01□□□□□ -1.13
CDKL5-201ENST00000379989 MYH4Q9Y623 1939 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 A0A1W2PQ67 120 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 LMNAP02545 664 aaKnown RBP8.01□□□□□ -1.13
CDKL5-201ENST00000379989 HSPA8P11142 646 aaKnown RBP8.01□□□□□ -1.13
CDKL5-201ENST00000379989 EPHB2P29323 1055 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 RELAQ04206 551 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 DCTN2Q13561 401 aaKnown RBP8.01□□□□□ -1.13
CDKL5-201ENST00000379989 CUL1Q13616 776 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 CCDC6Q16204 474 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 FXNQ16595 210 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 CHST3Q7LGC8 479 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 TMC3Q7Z5M5 1100 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 SCAIQ8N9R8 606 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 DDX12PQ92771 950 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 TBC1D10AQ9BXI6 508 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 GBA3Q9H227 469 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 TXLNGQ9NUQ3 528 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 IL1RAPL1Q9NZN1 696 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 SALL4Q9UJQ4 1053 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 CTNND2Q9UQB3 1225 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 PASKQ96RG2 1323 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 FBP2O00757 339 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 STK10O94804 968 aaKnown RBP8.01□□□□□ -1.13
CDKL5-201ENST00000379989 POTEIP0CG38 1075 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 CASP1P29466 404 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 TBL3Q12788 808 aaKnown RBP8.01□□□□□ -1.13
CDKL5-201ENST00000379989 NTRK3Q16288 839 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 ZCWPW2Q504Y3 356 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 TCP11X2Q5H9J9 407 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 KLHDC7AQ5VTJ3 777 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 CFAP61Q8NHU2 1237 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 CEP295NLQ96MC4 621 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 ZNF184Q99676 751 aaPredicted RBP8.01□□□□□ -1.13
CDKL5-201ENST00000379989 KRT82Q9NSB4 513 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 AGPAT5Q9NUQ2 364 aa8.01□□□□□ -1.13
CDKL5-201ENST00000379989 POTEFA5A3E0 1075 aa8□□□□□ -1.13
CDKL5-201ENST00000379989 UNCXA6NJT0 531 aa8□□□□□ -1.13
CDKL5-201ENST00000379989 ADAM23O75077 832 aa8□□□□□ -1.13
CDKL5-201ENST00000379989 CALML3P27482 149 aa8□□□□□ -1.13
CDKL5-201ENST00000379989 GTF2H1P32780 548 aa8□□□□□ -1.13
CDKL5-201ENST00000379989 SERPINB8P50452 374 aa8□□□□□ -1.13
CDKL5-201ENST00000379989 LRP8Q14114 963 aa8□□□□□ -1.13
CDKL5-201ENST00000379989 SEC23AQ15436 765 aa8□□□□□ -1.13
CDKL5-201ENST00000379989 KCTD19Q17RG1 926 aaPredicted RBP8□□□□□ -1.13
CDKL5-201ENST00000379989 FAM209AQ5JX71 171 aa8□□□□□ -1.13
CDKL5-201ENST00000379989 Q6ZNX1 250 aa8□□□□□ -1.13
CDKL5-201ENST00000379989 SATL1Q86VE3 508 aa8□□□□□ -1.13
CDKL5-201ENST00000379989 BPHLQ86WA6 291 aaPredicted RBP8□□□□□ -1.13
CDKL5-201ENST00000379989 KLHL7Q8IXQ5 586 aa8□□□□□ -1.13
CDKL5-201ENST00000379989 PPP1R10Q96QC0 940 aaKnown RBP8□□□□□ -1.13
CDKL5-201ENST00000379989 CCT7Q99832 543 aa8□□□□□ -1.13
CDKL5-201ENST00000379989 MKS1Q9NXB0 559 aa8□□□□□ -1.13
CDKL5-201ENST00000379989 QPCTLQ9NXS2 382 aa8□□□□□ -1.13
CDKL5-201ENST00000379989 RNF14Q9UBS8 474 aa8□□□□□ -1.13
CDKL5-201ENST00000379989 CCPG1Q9ULG6 757 aa8□□□□□ -1.13
CDKL5-201ENST00000379989 CARD8Q9Y2G2 431 aa8□□□□□ -1.13
CDKL5-201ENST00000379989 NOX1Q9Y5S8 564 aa8□□□□□ -1.13
CDKL5-201ENST00000379989 COL2A1P02458 1487 aaPredicted RBP8□□□□□ -1.13
CDKL5-201ENST00000379989 PLIN4Q96Q06 1357 aa8□□□□□ -1.13
CDKL5-201ENST00000379989 TCP11X1B4DZS4 312 aa8□□□□□ -1.13
CDKL5-201ENST00000379989 KCNJ18B7U540 433 aa8□□□□□ -1.13
CDKL5-201ENST00000379989 BHMG1C9JSJ3 638 aaPredicted RBP8□□□□□ -1.13
CDKL5-201ENST00000379989 TBC1D12O60347 775 aa8□□□□□ -1.13
CDKL5-201ENST00000379989 LDHBP07195 334 aaKnown RBP8□□□□□ -1.13
CDKL5-201ENST00000379989 S100A1P23297 94 aa8□□□□□ -1.13
CDKL5-201ENST00000379989 RGS2P41220 211 aa8□□□□□ -1.13
CDKL5-201ENST00000379989 AP1B1Q10567 949 aa8□□□□□ -1.13
CDKL5-201ENST00000379989 KCNJ12Q14500 433 aa8□□□□□ -1.13
CDKL5-201ENST00000379989 NFIXQ14938 502 aa8□□□□□ -1.13
CDKL5-201ENST00000379989 STK11IPQ8N1F8 1099 aa8□□□□□ -1.13
CDKL5-201ENST00000379989 MAELQ96JY0 434 aaKnown RBP8□□□□□ -1.13
CDKL5-201ENST00000379989 ZSCAN10Q96SZ4 725 aaPredicted RBP8□□□□□ -1.13
CDKL5-201ENST00000379989 ALG1Q9BT22 464 aa8□□□□□ -1.13
CDKL5-201ENST00000379989 COA1Q9GZY4 146 aa8□□□□□ -1.13
CDKL5-201ENST00000379989 VPS33BQ9H267 617 aa8□□□□□ -1.13
CDKL5-201ENST00000379989 BHMT2Q9H2M3 363 aa8□□□□□ -1.13
CDKL5-201ENST00000379989 MRPL46Q9H2W6 279 aaKnown RBP8□□□□□ -1.13
CDKL5-201ENST00000379989 PSTPIP2Q9H939 334 aa8□□□□□ -1.13
CDKL5-201ENST00000379989 DDX18Q9NVP1 670 aaKnown RBP8□□□□□ -1.13
CDKL5-201ENST00000379989 ZSWIM5Q9P217 1185 aa8□□□□□ -1.13
CDKL5-201ENST00000379989 HAO1Q9UJM8 370 aa8□□□□□ -1.13
CDKL5-201ENST00000379989 NDUFB9Q9Y6M9 179 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms