RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 OR1G1P47890 313 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 SNX17Q15036 470 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 ANO4Q32M45 955 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 LINC00116Q8NCU8 138 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 PPP1R13BQ96KQ4 1090 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 TRPV6Q9H1D0 765 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 SH3BP1Q9Y3L3 701 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 SNX9Q9Y5X1 595 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 NDUFA10O95299 355 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 NDUFB10O96000 172 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 NR3C2P08235 984 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 WDR72Q3MJ13 1102 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 ANKRD20A4Q4UJ75 823 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 GLE1Q53GS7 698 aaKnown RBP11.62□□□□□ -0.55
LINC00654-201ENST00000379053 ANKRD20A8PQ5CZ79 823 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 ANKRD20A2Q5SQ80 823 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 ANKRD20A1Q5TYW2 823 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 ATG16L1Q676U5 607 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 TEKT4Q8WW24 435 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 TMEM143Q96AN5 459 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 RNF25Q96BH1 459 aaPredicted RBP11.62□□□□□ -0.55
LINC00654-201ENST00000379053 SRPK1Q96SB4 655 aaKnown RBP11.62□□□□□ -0.55
LINC00654-201ENST00000379053 YIPF2Q9BWQ6 316 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 EHD2Q9NZN4 543 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 FBXL21Q9UKT6 434 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 UBE2Q2LH0YL09 131 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 BCAR1P56945 870 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 KCNH2Q12809 1159 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 C12orf60Q5U649 245 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 CDC42EP5Q6NZY7 148 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 CENPKQ9BS16 269 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 MRPL46Q9H2W6 279 aaKnown RBP11.62□□□□□ -0.55
LINC00654-201ENST00000379053 TRIM45Q9H8W5 580 aaPredicted RBP11.62□□□□□ -0.55
LINC00654-201ENST00000379053 LY9Q9HBG7 655 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 SAYSD1Q9NPB0 183 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 CLCA2Q9UQC9 943 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 PCDHB7Q9Y5E2 793 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 CPT1AP50416 773 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 HSD17B4P51659 736 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 PDE1CQ14123 709 aaPredicted RBP11.62□□□□□ -0.55
LINC00654-201ENST00000379053 GBP5Q96PP8 586 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 INTS2Q9H0H0 1204 aaKnown RBP11.62□□□□□ -0.55
LINC00654-201ENST00000379053 PFASO15067 1338 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 HNRNPCL2B2RXH8 293 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 ZNF197O14709 1029 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 RASGRF2O14827 1237 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 ORC4O43929 436 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 HNRNPCL1O60812 293 aaKnown RBP11.62□□□□□ -0.55
LINC00654-201ENST00000379053 ARHGDIAP52565 204 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 RCAN1P53805 252 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 KCNA1Q09470 495 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 CAPRIN1Q14444 709 aaKnown RBP11.62□□□□□ -0.55
LINC00654-201ENST00000379053 MGAT5BQ3V5L5 792 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 LMBRD2Q68DH5 695 aaPredicted RBP11.62□□□□□ -0.55
LINC00654-201ENST00000379053 BCAS4Q8TDM0 211 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 NSUN4Q96CB9 384 aaKnown RBP11.62□□□□□ -0.55
LINC00654-201ENST00000379053 PLEKHA5Q9HAU0 1116 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 CEP72Q9P209 647 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 PCDHB8Q9UN66 801 aa11.62□□□□□ -0.55
LINC00654-201ENST00000379053 FLT1P17948 1338 aa11.61□□□□□ -0.55
LINC00654-201ENST00000379053 IRF1P10914 325 aa11.61□□□□□ -0.55
LINC00654-201ENST00000379053 MMP14P50281 582 aa11.61□□□□□ -0.55
LINC00654-201ENST00000379053 POU5F1BQ06416 359 aa11.61□□□□□ -0.55
LINC00654-201ENST00000379053 TAF11Q15544 211 aa11.61□□□□□ -0.55
LINC00654-201ENST00000379053 EVA1BQ9NVM1 165 aa11.61□□□□□ -0.55
LINC00654-201ENST00000379053 DGAT1O75907 488 aa11.61□□□□□ -0.55
LINC00654-201ENST00000379053 KRT7P08729 469 aa11.61□□□□□ -0.55
LINC00654-201ENST00000379053 DGKDQ16760 1214 aa11.61□□□□□ -0.55
LINC00654-201ENST00000379053 MARCH10Q8NA82 808 aaPredicted RBP11.61□□□□□ -0.55
LINC00654-201ENST00000379053 STKLD1Q8NE28 680 aa11.61□□□□□ -0.55
LINC00654-201ENST00000379053 TMEM39BQ9GZU3 492 aa11.61□□□□□ -0.55
LINC00654-201ENST00000379053 VPS11Q9H270 941 aa11.61□□□□□ -0.55
LINC00654-201ENST00000379053 TRIM17Q9Y577 477 aa11.61□□□□□ -0.55
LINC00654-201ENST00000379053 RGS2P41220 211 aa11.61□□□□□ -0.55
LINC00654-201ENST00000379053 RBP5P82980 135 aa11.61□□□□□ -0.55
LINC00654-201ENST00000379053 ALX1Q15699 326 aa11.61□□□□□ -0.55
LINC00654-201ENST00000379053 TRIM68Q6AZZ1 485 aa11.61□□□□□ -0.55
LINC00654-201ENST00000379053 HHIPL2Q6UWX4 724 aa11.61□□□□□ -0.55
LINC00654-201ENST00000379053 SCFD2Q8WU76 684 aa11.61□□□□□ -0.55
LINC00654-201ENST00000379053 EPAS1Q99814 870 aa11.61□□□□□ -0.55
LINC00654-201ENST00000379053 MTA3Q9BTC8 594 aa11.61□□□□□ -0.55
LINC00654-201ENST00000379053 CFAP69A5D8W1 941 aa11.61□□□□□ -0.55
LINC00654-201ENST00000379053 TRIM49BA6NDI0 452 aa11.61□□□□□ -0.55
LINC00654-201ENST00000379053 MIF4GDA9UHW6 222 aaKnown RBP11.61□□□□□ -0.55
LINC00654-201ENST00000379053 MEI1Q5TIA1 1274 aa11.61□□□□□ -0.55
LINC00654-201ENST00000379053 RESP18Q5W5W9 173 aa11.61□□□□□ -0.55
LINC00654-201ENST00000379053 NBPF10Q6P3W6 841 aaKnown RBP11.61□□□□□ -0.55
LINC00654-201ENST00000379053 FMO2Q99518 471 aa11.61□□□□□ -0.55
LINC00654-201ENST00000379053 MTMR4Q9NYA4 1195 aa11.61□□□□□ -0.55
LINC00654-201ENST00000379053 IP6K2Q9UHH9 426 aa11.61□□□□□ -0.55
LINC00654-201ENST00000379053 KDM6AO15550 1401 aaPredicted RBP11.61□□□□□ -0.55
LINC00654-201ENST00000379053 PRPF4O43172 522 aaKnown RBP eCLIP11.61□□□□□ -0.55
LINC00654-201ENST00000379053 KRT38O76015 456 aa11.61□□□□□ -0.55
LINC00654-201ENST00000379053 ACSL3O95573 720 aa11.61□□□□□ -0.55
LINC00654-201ENST00000379053 SMARCA1P28370 1054 aa11.61□□□□□ -0.55
LINC00654-201ENST00000379053 STAG2Q8N3U4 1231 aa11.61□□□□□ -0.55
LINC00654-201ENST00000379053 VCPKMTQ9H867 229 aa11.61□□□□□ -0.55
LINC00654-201ENST00000379053 MED4Q9NPJ6 270 aa11.61□□□□□ -0.55
LINC00654-201ENST00000379053 SLC38A7Q9NVC3 462 aa11.61□□□□□ -0.55
LINC00654-201ENST00000379053 GTSE1Q9NYZ3 720 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 238.2 ms