RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 GPS1Q13098 491 aa12.02□□□□□ -0.48
RPGR-203ENST00000378505 WDR75Q8IWA0 830 aaKnown RBP12.02□□□□□ -0.48
RPGR-203ENST00000378505 SLC35G2Q8TBE7 412 aa12.02□□□□□ -0.48
RPGR-203ENST00000378505 SLIT1O75093 1534 aa12.02□□□□□ -0.48
RPGR-203ENST00000378505 EFNA5P52803 228 aa12.02□□□□□ -0.49
RPGR-203ENST00000378505 CASP7P55210 303 aa12.02□□□□□ -0.49
RPGR-203ENST00000378505 TMPRSS15P98073 1019 aa12.02□□□□□ -0.49
RPGR-203ENST00000378505 HDLBPQ00341 1268 aaKnown RBP12.02□□□□□ -0.49
RPGR-203ENST00000378505 BARGINQ6ZT62 677 aa12.02□□□□□ -0.49
RPGR-203ENST00000378505 CRLF3Q8IUI8 442 aa12.02□□□□□ -0.49
RPGR-203ENST00000378505 SYT2Q8N9I0 419 aaPredicted RBP12.02□□□□□ -0.49
RPGR-203ENST00000378505 HNRNPLLQ8WVV9 542 aaKnown RBP12.02□□□□□ -0.49
RPGR-203ENST00000378505 C1orf54Q8WWF1 131 aa12.02□□□□□ -0.49
RPGR-203ENST00000378505 MAML1Q92585 1016 aa12.02□□□□□ -0.49
RPGR-203ENST00000378505 PCSK1NQ9UHG2 260 aa12.02□□□□□ -0.49
RPGR-203ENST00000378505 WDR46O15213 610 aaKnown RBP12.02□□□□□ -0.49
RPGR-203ENST00000378505 MYBP10242 640 aa12.02□□□□□ -0.49
RPGR-203ENST00000378505 SKIP12755 728 aa12.02□□□□□ -0.49
RPGR-203ENST00000378505 JADE1Q6IE81 842 aa12.02□□□□□ -0.49
RPGR-203ENST00000378505 SPOPLQ6IQ16 392 aa12.02□□□□□ -0.49
RPGR-203ENST00000378505 INTS5Q6P9B9 1019 aaKnown RBP12.02□□□□□ -0.49
RPGR-203ENST00000378505 ATL2Q8NHH9 583 aa12.02□□□□□ -0.49
RPGR-203ENST00000378505 NUDCD1Q96RS6 583 aa12.02□□□□□ -0.49
RPGR-203ENST00000378505 RIT2Q99578 217 aa12.02□□□□□ -0.49
RPGR-203ENST00000378505 VCPKMTQ9H867 229 aa12.02□□□□□ -0.49
RPGR-203ENST00000378505 JPH1Q9HDC5 661 aaPredicted RBP12.02□□□□□ -0.49
RPGR-203ENST00000378505 PARVAQ9NVD7 372 aa12.02□□□□□ -0.49
RPGR-203ENST00000378505 FGFR1OP2Q9NVK5 253 aa12.02□□□□□ -0.49
RPGR-203ENST00000378505 DDX56Q9NY93 547 aaKnown RBP12.02□□□□□ -0.49
RPGR-203ENST00000378505 EPS15L1Q9UBC2 864 aa12.02□□□□□ -0.49
RPGR-203ENST00000378505 HEY1Q9Y5J3 304 aa12.02□□□□□ -0.49
RPGR-203ENST00000378505 SPDYE16A6NNV3 312 aaPredicted RBP12.02□□□□□ -0.49
RPGR-203ENST00000378505 FOXP2O15409 715 aa12.02□□□□□ -0.49
RPGR-203ENST00000378505 CYP2C19P33261 490 aa12.02□□□□□ -0.49
RPGR-203ENST00000378505 PLCB4Q15147 1175 aa12.02□□□□□ -0.49
RPGR-203ENST00000378505 SPDYE2Q495Y8 402 aa12.02□□□□□ -0.49
RPGR-203ENST00000378505 XKR3Q5GH77 459 aa12.02□□□□□ -0.49
RPGR-203ENST00000378505 APOBEC3FQ8IUX4 373 aaKnown RBP12.02□□□□□ -0.49
RPGR-203ENST00000378505 ANKS1AQ92625 1134 aa12.02□□□□□ -0.49
RPGR-203ENST00000378505 RBM12Q9NTZ6 932 aaKnown RBP12.02□□□□□ -0.49
RPGR-203ENST00000378505 A0A0G2JND7 137 aa12.01□□□□□ -0.49
RPGR-203ENST00000378505 CD44P16070 742 aaKnown RBP12.01□□□□□ -0.49
RPGR-203ENST00000378505 TAP1Q03518 808 aa12.01□□□□□ -0.49
RPGR-203ENST00000378505 SLC10A5Q5PT55 438 aa12.01□□□□□ -0.49
RPGR-203ENST00000378505 IZUMO3Q5VZ72 239 aa12.01□□□□□ -0.49
RPGR-203ENST00000378505 DSTYKQ6XUX3 929 aa12.01□□□□□ -0.49
RPGR-203ENST00000378505 CYFIP1Q7L576 1253 aa12.01□□□□□ -0.49
RPGR-203ENST00000378505 KBTBD4Q9NVX7 518 aa12.01□□□□□ -0.49
RPGR-203ENST00000378505 CPSF3Q9UKF6 684 aaKnown RBP12.01□□□□□ -0.49
RPGR-203ENST00000378505 PREX1Q8TCU6 1659 aa12.01□□□□□ -0.49
RPGR-203ENST00000378505 EIF3DO15371 548 aaKnown RBP eCLIP12.01□□□□□ -0.49
RPGR-203ENST00000378505 TAF11Q15544 211 aa12.01□□□□□ -0.49
RPGR-203ENST00000378505 RHPN2Q8IUC4 686 aa12.01□□□□□ -0.49
RPGR-203ENST00000378505 MMGT1Q8N4V1 131 aa12.01□□□□□ -0.49
RPGR-203ENST00000378505 CEP120Q8N960 986 aa12.01□□□□□ -0.49
RPGR-203ENST00000378505 RNF139Q8WU17 664 aa12.01□□□□□ -0.49
RPGR-203ENST00000378505 HVCN1Q96D96 273 aa12.01□□□□□ -0.49
RPGR-203ENST00000378505 LRGUKQ96M69 825 aa12.01□□□□□ -0.49
RPGR-203ENST00000378505 RPAP3Q9H6T3 665 aaPredicted RBP12.01□□□□□ -0.49
RPGR-203ENST00000378505 ATP8B3O60423 1300 aa12.01□□□□□ -0.49
RPGR-203ENST00000378505 TTI1O43156 1089 aa12.01□□□□□ -0.49
RPGR-203ENST00000378505 KRT3P12035 628 aa12.01□□□□□ -0.49
RPGR-203ENST00000378505 KLRC1P26715 233 aa12.01□□□□□ -0.49
RPGR-203ENST00000378505 ST3GAL1Q11201 340 aa12.01□□□□□ -0.49
RPGR-203ENST00000378505 TTLL4Q14679 1199 aa12.01□□□□□ -0.49
RPGR-203ENST00000378505 ATP11CQ8NB49 1132 aa12.01□□□□□ -0.49
RPGR-203ENST00000378505 NOP53Q9NZM5 478 aaKnown RBP12.01□□□□□ -0.49
RPGR-203ENST00000378505 MAGED2Q9UNF1 606 aaPredicted RBP12.01□□□□□ -0.49
RPGR-203ENST00000378505 KDM6AO15550 1401 aaPredicted RBP12.01□□□□□ -0.49
RPGR-203ENST00000378505 GOLGA8MH3BSY2 632 aa12.01□□□□□ -0.49
RPGR-203ENST00000378505 BCAR1P56945 870 aa12.01□□□□□ -0.49
RPGR-203ENST00000378505 NFX1Q12986 1120 aaKnown RBP12.01□□□□□ -0.49
RPGR-203ENST00000378505 E2F4Q16254 413 aa12.01□□□□□ -0.49
RPGR-203ENST00000378505 DCLK2Q8N568 766 aa12.01□□□□□ -0.49
RPGR-203ENST00000378505 MLXIPLQ9NP71 852 aa12.01□□□□□ -0.49
RPGR-203ENST00000378505 VWDEQ8N2E2 1590 aa12□□□□□ -0.49
RPGR-203ENST00000378505 AP5Z1O43299 807 aa12□□□□□ -0.49
RPGR-203ENST00000378505 TTC4O95801 387 aa12□□□□□ -0.49
RPGR-203ENST00000378505 KLK7P49862 253 aa12□□□□□ -0.49
RPGR-203ENST00000378505 GUCY1A3Q02108 690 aa12□□□□□ -0.49
RPGR-203ENST00000378505 KRT17Q04695 432 aa12□□□□□ -0.49
RPGR-203ENST00000378505 NCAPHQ15003 741 aa12□□□□□ -0.49
RPGR-203ENST00000378505 FIGNQ5HY92 759 aa12□□□□□ -0.49
RPGR-203ENST00000378505 KLHDC7AQ5VTJ3 777 aa12□□□□□ -0.49
RPGR-203ENST00000378505 THOC1Q96FV9 657 aaKnown RBP12□□□□□ -0.49
RPGR-203ENST00000378505 TRIM56Q9BRZ2 755 aaKnown RBP12□□□□□ -0.49
RPGR-203ENST00000378505 PPP1R9AQ9ULJ8 1098 aa12□□□□□ -0.49
RPGR-203ENST00000378505 ITSN1Q15811 1721 aa12□□□□□ -0.49
RPGR-203ENST00000378505 M0QYV0 167 aa12□□□□□ -0.49
RPGR-203ENST00000378505 TMEM253P0C7T8 217 aa12□□□□□ -0.49
RPGR-203ENST00000378505 PDIA2Q13087 525 aaKnown RBP12□□□□□ -0.49
RPGR-203ENST00000378505 SYDE1Q6ZW31 735 aaPredicted RBP12□□□□□ -0.49
RPGR-203ENST00000378505 BEST2Q8NFU1 509 aa12□□□□□ -0.49
RPGR-203ENST00000378505 FAM151AQ8WW52 585 aa12□□□□□ -0.49
RPGR-203ENST00000378505 VPS39Q96JC1 886 aa12□□□□□ -0.49
RPGR-203ENST00000378505 DNAJC7Q99615 494 aa12□□□□□ -0.49
RPGR-203ENST00000378505 SH2D3AQ9BRG2 576 aa12□□□□□ -0.49
RPGR-203ENST00000378505 EFHD1Q9BUP0 239 aa12□□□□□ -0.49
RPGR-203ENST00000378505 TEX13BQ9BXU2 312 aa12□□□□□ -0.49
RPGR-203ENST00000378505 PPARGC1AQ9UBK2 798 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms