RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 PRKD2Q9BZL6 878 aa13.96□□□□□ -0.17
HDAC8-204ENST00000373560 RNF41Q9H4P4 317 aaPredicted RBP13.96□□□□□ -0.17
HDAC8-204ENST00000373560 EML5Q05BV3 1969 aa13.96□□□□□ -0.18
HDAC8-204ENST00000373560 COL1A2P08123 1366 aa13.96□□□□□ -0.18
HDAC8-204ENST00000373560 DDX39AO00148 427 aaKnown RBP13.95□□□□□ -0.18
HDAC8-204ENST00000373560 OFD1O75665 1012 aa13.95□□□□□ -0.18
HDAC8-204ENST00000373560 SOD2P04179 222 aa13.95□□□□□ -0.18
HDAC8-204ENST00000373560 URODP06132 367 aa13.95□□□□□ -0.18
HDAC8-204ENST00000373560 ADH1AP07327 375 aa13.95□□□□□ -0.18
HDAC8-204ENST00000373560 PHKA2P46019 1235 aa13.95□□□□□ -0.18
HDAC8-204ENST00000373560 NRLP54845 237 aa13.95□□□□□ -0.18
HDAC8-204ENST00000373560 GRM4Q14833 912 aa13.95□□□□□ -0.18
HDAC8-204ENST00000373560 HEATR6Q6AI08 1181 aaKnown RBP13.95□□□□□ -0.18
HDAC8-204ENST00000373560 KIAA1211LQ6NV74 962 aa13.95□□□□□ -0.18
HDAC8-204ENST00000373560 TRMT1LQ7Z2T5 733 aaKnown RBP13.95□□□□□ -0.18
HDAC8-204ENST00000373560 FGF13Q92913 245 aa13.95□□□□□ -0.18
HDAC8-204ENST00000373560 PHF20Q9BVI0 1012 aa13.95□□□□□ -0.18
HDAC8-204ENST00000373560 DDX19BQ9UMR2 479 aa13.95□□□□□ -0.18
HDAC8-204ENST00000373560 MYH9P35579 1960 aaKnown RBP13.94□□□□□ -0.18
HDAC8-204ENST00000373560 SALL3Q9BXA9 1300 aa13.94□□□□□ -0.18
HDAC8-204ENST00000373560 SPAG17Q6Q759 2223 aa13.94□□□□□ -0.18
HDAC8-204ENST00000373560 PIK3CDO00329 1044 aa13.94□□□□□ -0.18
HDAC8-204ENST00000373560 NRG2O14511 850 aaPredicted RBP13.94□□□□□ -0.18
HDAC8-204ENST00000373560 TGM5O43548 720 aa13.94□□□□□ -0.18
HDAC8-204ENST00000373560 ATG7O95352 703 aa13.94□□□□□ -0.18
HDAC8-204ENST00000373560 EIF4BP23588 611 aaKnown RBP13.94□□□□□ -0.18
HDAC8-204ENST00000373560 RNASELQ05823 741 aaKnown RBP13.94□□□□□ -0.18
HDAC8-204ENST00000373560 PDCD11Q14690 1871 aaKnown RBP13.94□□□□□ -0.18
HDAC8-204ENST00000373560 MCMDC2Q4G0Z9 681 aa13.94□□□□□ -0.18
HDAC8-204ENST00000373560 IFIT1BQ5T764 474 aaKnown RBP13.94□□□□□ -0.18
HDAC8-204ENST00000373560 ZNF852Q6ZMS4 543 aa13.94□□□□□ -0.18
HDAC8-204ENST00000373560 RNF168Q8IYW5 571 aaPredicted RBP13.94□□□□□ -0.18
HDAC8-204ENST00000373560 C12orf50Q8NA57 414 aaPredicted RBP13.94□□□□□ -0.18
HDAC8-204ENST00000373560 ADAM32Q8TC27 787 aa13.94□□□□□ -0.18
HDAC8-204ENST00000373560 EPAS1Q99814 870 aa13.94□□□□□ -0.18
HDAC8-204ENST00000373560 KCNH7Q9NS40 1196 aa13.94□□□□□ -0.18
HDAC8-204ENST00000373560 AKT3Q9Y243 479 aa13.94□□□□□ -0.18
HDAC8-204ENST00000373560 PRG3Q9Y2Y8 225 aaPredicted RBP13.94□□□□□ -0.18
HDAC8-204ENST00000373560 K7ESF4 209 aa13.93□□□□□ -0.18
HDAC8-204ENST00000373560 NRP1O14786 923 aa13.93□□□□□ -0.18
HDAC8-204ENST00000373560 NCAM2O15394 837 aa13.93□□□□□ -0.18
HDAC8-204ENST00000373560 EFEMP2O95967 443 aa13.93□□□□□ -0.18
HDAC8-204ENST00000373560 DARSP14868 501 aaKnown RBP13.93□□□□□ -0.18
HDAC8-204ENST00000373560 RPL17P18621 184 aaKnown RBP13.93□□□□□ -0.18
HDAC8-204ENST00000373560 PFKPQ01813 784 aa13.93□□□□□ -0.18
HDAC8-204ENST00000373560 CCDC178Q5BJE1 867 aa13.93□□□□□ -0.18
HDAC8-204ENST00000373560 WDR44Q5JSH3 913 aa13.93□□□□□ -0.18
HDAC8-204ENST00000373560 ZNF484Q5JVG2 852 aa13.93□□□□□ -0.18
HDAC8-204ENST00000373560 CYB5R4Q7L1T6 521 aa13.93□□□□□ -0.18
HDAC8-204ENST00000373560 PDZD3Q86UT5 571 aa13.93□□□□□ -0.18
HDAC8-204ENST00000373560 ING5Q8WYH8 240 aa13.93□□□□□ -0.18
HDAC8-204ENST00000373560 TNPO1Q92973 898 aaKnown RBP13.93□□□□□ -0.18
HDAC8-204ENST00000373560 KCNK17Q96T54 332 aa13.93□□□□□ -0.18
HDAC8-204ENST00000373560 DCTPP1Q9H773 170 aa13.93□□□□□ -0.18
HDAC8-204ENST00000373560 RXFP1Q9HBX9 757 aa13.93□□□□□ -0.18
HDAC8-204ENST00000373560 ZDHHC7Q9NXF8 308 aa13.93□□□□□ -0.18
HDAC8-204ENST00000373560 NAV2Q8IVL1 2488 aa13.93□□□□□ -0.18
HDAC8-204ENST00000373560 CELSR3Q9NYQ7 3312 aa13.93□□□□□ -0.18
HDAC8-204ENST00000373560 NFASCO94856 1347 aa13.92□□□□□ -0.18
HDAC8-204ENST00000373560 BACH1O14867 736 aa13.92□□□□□ -0.18
HDAC8-204ENST00000373560 ZNF806P0C7X5 589 aa13.92□□□□□ -0.18
HDAC8-204ENST00000373560 MLLT3P42568 568 aaPredicted RBP13.92□□□□□ -0.18
HDAC8-204ENST00000373560 GLUD2P49448 558 aa13.92□□□□□ -0.18
HDAC8-204ENST00000373560 GPC3P51654 580 aa13.92□□□□□ -0.18
HDAC8-204ENST00000373560 CCR3P51677 355 aa13.92□□□□□ -0.18
HDAC8-204ENST00000373560 PDXDC2PQ6P474 469 aa13.92□□□□□ -0.18
HDAC8-204ENST00000373560 LILRA6Q6PI73 481 aa13.92□□□□□ -0.18
HDAC8-204ENST00000373560 GLB1LQ6UWU2 654 aa13.92□□□□□ -0.18
HDAC8-204ENST00000373560 ABHD15Q6UXT9 468 aa13.92□□□□□ -0.18
HDAC8-204ENST00000373560 MTSS1LQ765P7 747 aa13.92□□□□□ -0.18
HDAC8-204ENST00000373560 NPAS3Q8IXF0 933 aa13.92□□□□□ -0.18
HDAC8-204ENST00000373560 HCFC1R1Q9NWW0 138 aa13.92□□□□□ -0.18
HDAC8-204ENST00000373560 GPSM3Q9Y4H4 160 aa13.92□□□□□ -0.18
HDAC8-204ENST00000373560 F5P12259 2224 aa13.91□□□□□ -0.18
HDAC8-204ENST00000373560 ZNF213O14771 459 aa13.91□□□□□ -0.18
HDAC8-204ENST00000373560 ZMYND10O75800 440 aa13.91□□□□□ -0.18
HDAC8-204ENST00000373560 MX1P20591 662 aa13.91□□□□□ -0.18
HDAC8-204ENST00000373560 DRP2Q13474 957 aa13.91□□□□□ -0.18
HDAC8-204ENST00000373560 AGMOQ6ZNB7 445 aa13.91□□□□□ -0.18
HDAC8-204ENST00000373560 Q6ZS52 159 aa13.91□□□□□ -0.18
HDAC8-204ENST00000373560 CUL5Q93034 780 aa13.91□□□□□ -0.18
HDAC8-204ENST00000373560 PGBD1Q96JS3 809 aa13.91□□□□□ -0.18
HDAC8-204ENST00000373560 NELL2Q99435 816 aa13.91□□□□□ -0.18
HDAC8-204ENST00000373560 LMAN1LQ9HAT1 526 aa13.91□□□□□ -0.18
HDAC8-204ENST00000373560 AGO4Q9HCK5 861 aaKnown RBP13.91□□□□□ -0.18
HDAC8-204ENST00000373560 ZFP37Q9Y6Q3 630 aaPredicted RBP13.91□□□□□ -0.18
HDAC8-204ENST00000373560 TENM4Q6N022 2769 aa13.9□□□□□ -0.18
HDAC8-204ENST00000373560 ARHGAP33O14559 1287 aa13.9□□□□□ -0.18
HDAC8-204ENST00000373560 MAP3K7O43318 606 aa13.9□□□□□ -0.18
HDAC8-204ENST00000373560 HYAL3O43820 417 aaPredicted RBP13.9□□□□□ -0.18
HDAC8-204ENST00000373560 GAS2O43903 313 aaKnown RBP13.9□□□□□ -0.18
HDAC8-204ENST00000373560 FOXD2O60548 495 aaPredicted RBP13.9□□□□□ -0.18
HDAC8-204ENST00000373560 EPN2O95208 641 aa13.9□□□□□ -0.18
HDAC8-204ENST00000373560 SLC26A2P50443 739 aa13.9□□□□□ -0.18
HDAC8-204ENST00000373560 GRM2Q14416 872 aa13.9□□□□□ -0.18
HDAC8-204ENST00000373560 COL28A1Q2UY09 1125 aa13.9□□□□□ -0.18
HDAC8-204ENST00000373560 PLA2G2CQ5R387 149 aa13.9□□□□□ -0.18
HDAC8-204ENST00000373560 SH3PXD2AQ5TCZ1 1133 aa13.9□□□□□ -0.18
HDAC8-204ENST00000373560 RNF43Q68DV7 783 aa13.9□□□□□ -0.18
HDAC8-204ENST00000373560 EFCAB12Q6NXP0 572 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms