RNA–Protein interactions for RNA: ENST00000373163.5

TRAPPC3-203, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-203ENST00000373163 SEPT9Q9UHD8 586 aaPredicted RBP17.64■□□□□ 0.41
TRAPPC3-203ENST00000373163 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.64■□□□□ 0.41
TRAPPC3-203ENST00000373163 CFAP47Q6ZTR5 3102 aa17.64■□□□□ 0.41
TRAPPC3-203ENST00000373163 IGKV6-21A0A0C4DH24 114 aa17.63■□□□□ 0.41
TRAPPC3-203ENST00000373163 IGHDP01880 384 aa17.63■□□□□ 0.41
TRAPPC3-203ENST00000373163 SYNE3Q6ZMZ3 975 aa17.63■□□□□ 0.41
TRAPPC3-203ENST00000373163 SGMS1Q86VZ5 419 aa17.63■□□□□ 0.41
TRAPPC3-203ENST00000373163 COLGALT2Q8IYK4 626 aa17.63■□□□□ 0.41
TRAPPC3-203ENST00000373163 CLDN23Q96B33 292 aa17.63■□□□□ 0.41
TRAPPC3-203ENST00000373163 FAM126AQ9BYI3 521 aaPredicted RBP17.63■□□□□ 0.41
TRAPPC3-203ENST00000373163 LRRC2Q9BYS8 371 aa17.63■□□□□ 0.41
TRAPPC3-203ENST00000373163 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.63■□□□□ 0.41
TRAPPC3-203ENST00000373163 RAB23Q9ULC3 237 aa17.63■□□□□ 0.41
TRAPPC3-203ENST00000373163 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.62■□□□□ 0.41
TRAPPC3-203ENST00000373163 NCAM2O15394 837 aa17.62■□□□□ 0.41
TRAPPC3-203ENST00000373163 SGSM2O43147 1006 aa17.62■□□□□ 0.41
TRAPPC3-203ENST00000373163 CHMP2AO43633 222 aa17.62■□□□□ 0.41
TRAPPC3-203ENST00000373163 ZMYND10O75800 440 aa17.62■□□□□ 0.41
TRAPPC3-203ENST00000373163 TARSP26639 723 aaKnown RBP17.62■□□□□ 0.41
TRAPPC3-203ENST00000373163 DMWDQ09019 674 aa17.62■□□□□ 0.41
TRAPPC3-203ENST00000373163 FUT2Q10981 343 aa17.62■□□□□ 0.41
TRAPPC3-203ENST00000373163 COL9A2Q14055 689 aaPredicted RBP17.62■□□□□ 0.41
TRAPPC3-203ENST00000373163 LILRA6Q6PI73 481 aa17.62■□□□□ 0.41
TRAPPC3-203ENST00000373163 GRASPQ7Z6J2 395 aaPredicted RBP17.62■□□□□ 0.41
TRAPPC3-203ENST00000373163 GLYCTKQ8IVS8 523 aa17.62■□□□□ 0.41
TRAPPC3-203ENST00000373163 KSR1Q8IVT5 923 aa17.62■□□□□ 0.41
TRAPPC3-203ENST00000373163 B3GALT6Q96L58 329 aa17.62■□□□□ 0.41
TRAPPC3-203ENST00000373163 CEP89Q96ST8 783 aa17.62■□□□□ 0.41
TRAPPC3-203ENST00000373163 NELL2Q99435 816 aa17.62■□□□□ 0.41
TRAPPC3-203ENST00000373163 NIFKQ9BYG3 293 aaKnown RBP17.62■□□□□ 0.41
TRAPPC3-203ENST00000373163 CHST7Q9NS84 486 aa17.62■□□□□ 0.41
TRAPPC3-203ENST00000373163 TMEM150BA6NC51 233 aa17.61■□□□□ 0.41
TRAPPC3-203ENST00000373163 F8W810 466 aa17.61■□□□□ 0.41
TRAPPC3-203ENST00000373163 SFNP31947 248 aa17.61■□□□□ 0.41
TRAPPC3-203ENST00000373163 RPS9P46781 194 aaKnown RBP17.61■□□□□ 0.41
TRAPPC3-203ENST00000373163 JAK3P52333 1124 aa17.61■□□□□ 0.41
TRAPPC3-203ENST00000373163 LPAL2Q16609 132 aa17.61■□□□□ 0.41
TRAPPC3-203ENST00000373163 TTC22Q5TAA0 569 aa17.61■□□□□ 0.41
TRAPPC3-203ENST00000373163 DIEXFQ68CQ4 756 aaKnown RBP17.61■□□□□ 0.41
TRAPPC3-203ENST00000373163 TPRG1Q6ZUI0 275 aa17.61■□□□□ 0.41
TRAPPC3-203ENST00000373163 FGF13Q92913 245 aa17.61■□□□□ 0.41
TRAPPC3-203ENST00000373163 LENG9Q96B70 501 aa17.61■□□□□ 0.41
TRAPPC3-203ENST00000373163 SH2D3AQ9BRG2 576 aa17.61■□□□□ 0.41
TRAPPC3-203ENST00000373163 IFT122Q9HBG6 1241 aa17.61■□□□□ 0.41
TRAPPC3-203ENST00000373163 FAM217BQ9NTX9 383 aaPredicted RBP17.61■□□□□ 0.41
TRAPPC3-203ENST00000373163 FNIP2Q9P278 1114 aa17.61■□□□□ 0.41
TRAPPC3-203ENST00000373163 CACNA1IQ9P0X4 2223 aa17.61■□□□□ 0.41
TRAPPC3-203ENST00000373163 NR1I2O75469 434 aa17.6■□□□□ 0.41
TRAPPC3-203ENST00000373163 NCLP19338 710 aaKnown RBP17.6■□□□□ 0.41
TRAPPC3-203ENST00000373163 KCNA4P22459 653 aa17.6■□□□□ 0.41
TRAPPC3-203ENST00000373163 CIITAP33076 1130 aa17.6■□□□□ 0.41
TRAPPC3-203ENST00000373163 NTHL1P78549 312 aa17.6■□□□□ 0.41
TRAPPC3-203ENST00000373163 DSC1Q08554 894 aa17.6■□□□□ 0.41
TRAPPC3-203ENST00000373163 RTN1Q16799 776 aa17.6■□□□□ 0.41
TRAPPC3-203ENST00000373163 XKR3Q5GH77 459 aa17.6■□□□□ 0.41
TRAPPC3-203ENST00000373163 UBXN11Q5T124 520 aa17.6■□□□□ 0.41
TRAPPC3-203ENST00000373163 LAIR1Q6GTX8 287 aa17.6■□□□□ 0.41
TRAPPC3-203ENST00000373163 APOA5Q6Q788 366 aa17.6■□□□□ 0.41
TRAPPC3-203ENST00000373163 KXD1Q9BQD3 176 aa17.6■□□□□ 0.41
TRAPPC3-203ENST00000373163 PHF20Q9BVI0 1012 aa17.6■□□□□ 0.41
TRAPPC3-203ENST00000373163 UBN1Q9NPG3 1134 aa17.6■□□□□ 0.41
TRAPPC3-203ENST00000373163 ANGPTL2Q9UKU9 493 aa17.6■□□□□ 0.41
TRAPPC3-203ENST00000373163 PATJQ8NI35 1801 aa17.6■□□□□ 0.41
TRAPPC3-203ENST00000373163 DOCK8Q8NF50 2099 aa17.59■□□□□ 0.41
TRAPPC3-203ENST00000373163 ADAMTS3O15072 1205 aa17.59■□□□□ 0.41
TRAPPC3-203ENST00000373163 GAS7O60861 476 aa17.59■□□□□ 0.41
TRAPPC3-203ENST00000373163 RPL17P18621 184 aaKnown RBP17.59■□□□□ 0.41
TRAPPC3-203ENST00000373163 CREMQ03060 361 aa17.59■□□□□ 0.41
TRAPPC3-203ENST00000373163 MTAPQ13126 283 aa17.59■□□□□ 0.41
TRAPPC3-203ENST00000373163 AAMPQ13685 434 aa17.59■□□□□ 0.41
TRAPPC3-203ENST00000373163 USP41Q3LFD5 358 aa17.59■□□□□ 0.41
TRAPPC3-203ENST00000373163 ZNF852Q6ZMS4 543 aa17.59■□□□□ 0.41
TRAPPC3-203ENST00000373163 GPR65Q8IYL9 337 aa17.59■□□□□ 0.41
TRAPPC3-203ENST00000373163 REXO1Q8N1G1 1221 aaKnown RBP17.59■□□□□ 0.41
TRAPPC3-203ENST00000373163 CELF5Q8N6W0 485 aaKnown RBP17.59■□□□□ 0.41
TRAPPC3-203ENST00000373163 EXOC6Q8TAG9 804 aa17.59■□□□□ 0.41
TRAPPC3-203ENST00000373163 MBOAT7Q96N66 472 aa17.59■□□□□ 0.41
TRAPPC3-203ENST00000373163 RIT2Q99578 217 aa17.59■□□□□ 0.41
TRAPPC3-203ENST00000373163 COLEC11Q9BWP8 271 aa17.59■□□□□ 0.41
TRAPPC3-203ENST00000373163 UNC45AQ9H3U1 944 aa17.59■□□□□ 0.41
TRAPPC3-203ENST00000373163 SPTBN2O15020 2390 aa17.58■□□□□ 0.41
TRAPPC3-203ENST00000373163 ARL5CA6NH57 179 aa17.58■□□□□ 0.4
TRAPPC3-203ENST00000373163 MSH4O15457 936 aa17.58■□□□□ 0.4
TRAPPC3-203ENST00000373163 LRP3O75074 770 aa17.58■□□□□ 0.4
TRAPPC3-203ENST00000373163 MAFO75444 373 aaPredicted RBP17.58■□□□□ 0.4
TRAPPC3-203ENST00000373163 STBD1O95210 358 aa17.58■□□□□ 0.4
TRAPPC3-203ENST00000373163 RETP07949 1114 aa17.58■□□□□ 0.4
TRAPPC3-203ENST00000373163 ITGA4P13612 1032 aa17.58■□□□□ 0.4
TRAPPC3-203ENST00000373163 HOXA11P31270 313 aaPredicted RBP17.58■□□□□ 0.4
TRAPPC3-203ENST00000373163 MLH1P40692 756 aa17.58■□□□□ 0.4
TRAPPC3-203ENST00000373163 NRLP54845 237 aa17.58■□□□□ 0.4
TRAPPC3-203ENST00000373163 FUT10Q6P4F1 479 aa17.58■□□□□ 0.4
TRAPPC3-203ENST00000373163 SMG8Q8ND04 991 aaKnown RBP17.58■□□□□ 0.4
TRAPPC3-203ENST00000373163 CNNM3Q8NE01 707 aa17.58■□□□□ 0.4
TRAPPC3-203ENST00000373163 GAD1Q99259 594 aa17.58■□□□□ 0.4
TRAPPC3-203ENST00000373163 TEKT3Q9BXF9 490 aa17.58■□□□□ 0.4
TRAPPC3-203ENST00000373163 GPR62Q9BZJ7 368 aa17.58■□□□□ 0.4
TRAPPC3-203ENST00000373163 SEMA4GQ9NTN9 838 aa17.58■□□□□ 0.4
TRAPPC3-203ENST00000373163 FBXW11Q9UKB1 542 aa17.58■□□□□ 0.4
TRAPPC3-203ENST00000373163 MRPS17Q9Y2R5 130 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms