RNA–Protein interactions for RNA: ENST00000370886.9

EXOSC1-203, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 741 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-203ENST00000370886 SLC16A4O15374 487 aa11.8□□□□□ -0.52
EXOSC1-203ENST00000370886 ERLIN2O94905 339 aa11.8□□□□□ -0.52
EXOSC1-203ENST00000370886 ZNF202O95125 648 aa11.8□□□□□ -0.52
EXOSC1-203ENST00000370886 SLFN14P0C7P3 912 aa11.8□□□□□ -0.52
EXOSC1-203ENST00000370886 PLS3P13797 630 aa11.8□□□□□ -0.52
EXOSC1-203ENST00000370886 SFPQP23246 707 aaKnown RBP eCLIP11.8□□□□□ -0.52
EXOSC1-203ENST00000370886 NPTX2P47972 431 aa11.8□□□□□ -0.52
EXOSC1-203ENST00000370886 ASIC1P78348 528 aa11.8□□□□□ -0.52
EXOSC1-203ENST00000370886 FOXK2Q01167 660 aa11.8□□□□□ -0.52
EXOSC1-203ENST00000370886 DMP1Q13316 513 aaPredicted RBP11.8□□□□□ -0.52
EXOSC1-203ENST00000370886 GIT2Q14161 759 aa11.8□□□□□ -0.52
EXOSC1-203ENST00000370886 PLEKHG4Q58EX7 1191 aa11.8□□□□□ -0.52
EXOSC1-203ENST00000370886 ODR4Q5SWX8 454 aa11.8□□□□□ -0.52
EXOSC1-203ENST00000370886 FAM228AQ86W67 206 aa11.8□□□□□ -0.52
EXOSC1-203ENST00000370886 DAW1Q8N136 415 aa11.8□□□□□ -0.52
EXOSC1-203ENST00000370886 ZNF710Q8N1W2 664 aa11.8□□□□□ -0.52
EXOSC1-203ENST00000370886 PAGE5Q96GU1 130 aa11.8□□□□□ -0.52
EXOSC1-203ENST00000370886 TIPINQ9BVW5 301 aa11.8□□□□□ -0.52
EXOSC1-203ENST00000370886 MINDY3Q9H8M7 445 aa11.8□□□□□ -0.52
EXOSC1-203ENST00000370886 IFT122Q9HBG6 1241 aa11.8□□□□□ -0.52
EXOSC1-203ENST00000370886 KCND2Q9NZV8 630 aa11.8□□□□□ -0.52
EXOSC1-203ENST00000370886 MUTYHQ9UIF7 546 aa11.8□□□□□ -0.52
EXOSC1-203ENST00000370886 HPSEQ9Y251 543 aa11.8□□□□□ -0.52
EXOSC1-203ENST00000370886 USP20Q9Y2K6 914 aa11.8□□□□□ -0.52
EXOSC1-203ENST00000370886 CFAP54Q96N23 3096 aa11.8□□□□□ -0.52
EXOSC1-203ENST00000370886 CACNA1AO00555 2505 aa11.8□□□□□ -0.52
EXOSC1-203ENST00000370886 ACTN4O43707 911 aaKnown RBP11.79□□□□□ -0.52
EXOSC1-203ENST00000370886 UPP2O95045 317 aa11.79□□□□□ -0.52
EXOSC1-203ENST00000370886 ZSCAN20P17040 1043 aaPredicted RBP11.79□□□□□ -0.52
EXOSC1-203ENST00000370886 NAMPTP43490 491 aa11.79□□□□□ -0.52
EXOSC1-203ENST00000370886 SMTNP53814 917 aa11.79□□□□□ -0.52
EXOSC1-203ENST00000370886 PTENP60484 403 aa11.79□□□□□ -0.52
EXOSC1-203ENST00000370886 NCBP1Q09161 790 aaKnown RBP11.79□□□□□ -0.52
EXOSC1-203ENST00000370886 MAPK7Q13164 816 aa11.79□□□□□ -0.52
EXOSC1-203ENST00000370886 SMAD2Q15796 467 aaKnown RBP11.79□□□□□ -0.52
EXOSC1-203ENST00000370886 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.79□□□□□ -0.52
EXOSC1-203ENST00000370886 BMP8AQ7Z5Y6 402 aa11.79□□□□□ -0.52
EXOSC1-203ENST00000370886 SRGAP1Q7Z6B7 1085 aa11.79□□□□□ -0.52
EXOSC1-203ENST00000370886 SUGP1Q8IWZ8 645 aaKnown RBP11.79□□□□□ -0.52
EXOSC1-203ENST00000370886 RNF169Q8NCN4 708 aa11.79□□□□□ -0.52
EXOSC1-203ENST00000370886 APBB2Q92870 758 aa11.79□□□□□ -0.52
EXOSC1-203ENST00000370886 ADAM2Q99965 735 aa11.79□□□□□ -0.52
EXOSC1-203ENST00000370886 C2orf40Q9H1Z8 148 aa11.79□□□□□ -0.52
EXOSC1-203ENST00000370886 TNMDQ9H2S6 317 aa11.79□□□□□ -0.52
EXOSC1-203ENST00000370886 TMX1Q9H3N1 280 aa11.79□□□□□ -0.52
EXOSC1-203ENST00000370886 PARVGQ9HBI0 331 aa11.79□□□□□ -0.52
EXOSC1-203ENST00000370886 ERVK-5Q9HDB9 667 aa11.79□□□□□ -0.52
EXOSC1-203ENST00000370886 PANK4Q9NVE7 773 aa11.79□□□□□ -0.52
EXOSC1-203ENST00000370886 ODF2LQ9ULJ1 636 aa11.79□□□□□ -0.52
EXOSC1-203ENST00000370886 PIN4Q9Y237 131 aaKnown RBP11.79□□□□□ -0.52
EXOSC1-203ENST00000370886 RIF1Q5UIP0 2472 aaKnown RBP11.79□□□□□ -0.52
EXOSC1-203ENST00000370886 C5orf42Q9H799 3197 aa11.79□□□□□ -0.52
EXOSC1-203ENST00000370886 GOLGA6L22H0YM25 854 aa11.78□□□□□ -0.52
EXOSC1-203ENST00000370886 K7ENM7 598 aa11.78□□□□□ -0.52
EXOSC1-203ENST00000370886 K7ERI5 159 aa11.78□□□□□ -0.52
EXOSC1-203ENST00000370886 B4GALT5O43286 388 aa11.78□□□□□ -0.52
EXOSC1-203ENST00000370886 TRAK2O60296 914 aa11.78□□□□□ -0.52
EXOSC1-203ENST00000370886 MBTD1Q05BQ5 628 aa11.78□□□□□ -0.52
EXOSC1-203ENST00000370886 FAM160A1Q05DH4 1040 aa11.78□□□□□ -0.52
EXOSC1-203ENST00000370886 CUL4BQ13620 913 aa11.78□□□□□ -0.52
EXOSC1-203ENST00000370886 KRBA2Q6ZNG9 492 aa11.78□□□□□ -0.52
EXOSC1-203ENST00000370886 CDR2LQ86X02 465 aaPredicted RBP11.78□□□□□ -0.52
EXOSC1-203ENST00000370886 SFR1Q86XK3 245 aa11.78□□□□□ -0.52
EXOSC1-203ENST00000370886 CCDC65Q8IXS2 484 aa11.78□□□□□ -0.52
EXOSC1-203ENST00000370886 TMEM192Q8IY95 271 aa11.78□□□□□ -0.52
EXOSC1-203ENST00000370886 PRSS33Q8NF86 280 aa11.78□□□□□ -0.52
EXOSC1-203ENST00000370886 EDAQ92838 391 aa11.78□□□□□ -0.52
EXOSC1-203ENST00000370886 CPB2Q96IY4 423 aa11.78□□□□□ -0.52
EXOSC1-203ENST00000370886 LMAN2LQ9H0V9 348 aa11.78□□□□□ -0.52
EXOSC1-203ENST00000370886 IRF2BPLQ9H1B7 796 aa11.78□□□□□ -0.52
EXOSC1-203ENST00000370886 MAGEF1Q9HAY2 307 aa11.78□□□□□ -0.52
EXOSC1-203ENST00000370886 KBTBD4Q9NVX7 518 aa11.78□□□□□ -0.52
EXOSC1-203ENST00000370886 LARSQ9P2J5 1176 aaKnown RBP11.78□□□□□ -0.52
EXOSC1-203ENST00000370886 USP25Q9UHP3 1055 aa11.78□□□□□ -0.52
EXOSC1-203ENST00000370886 SQORQ9Y6N5 450 aa11.78□□□□□ -0.52
EXOSC1-203ENST00000370886 ZFHX2Q9C0A1 2572 aaPredicted RBP11.78□□□□□ -0.52
EXOSC1-203ENST00000370886 FAM186AA6NE01 2351 aa11.78□□□□□ -0.52
EXOSC1-203ENST00000370886 USP34Q70CQ2 3546 aa11.77□□□□□ -0.52
EXOSC1-203ENST00000370886 TULP1O00294 542 aaPredicted RBP11.77□□□□□ -0.53
EXOSC1-203ENST00000370886 ENPP3O14638 875 aa11.77□□□□□ -0.53
EXOSC1-203ENST00000370886 MBTPS2O43462 519 aa11.77□□□□□ -0.53
EXOSC1-203ENST00000370886 MGEA5O60502 916 aa11.77□□□□□ -0.53
EXOSC1-203ENST00000370886 KINO60870 393 aaKnown RBP11.77□□□□□ -0.53
EXOSC1-203ENST00000370886 NR1I2O75469 434 aa11.77□□□□□ -0.53
EXOSC1-203ENST00000370886 PRKCBP05771 671 aa11.77□□□□□ -0.53
EXOSC1-203ENST00000370886 NMT1P30419 496 aaKnown RBP11.77□□□□□ -0.53
EXOSC1-203ENST00000370886 EFNA5P52803 228 aa11.77□□□□□ -0.53
EXOSC1-203ENST00000370886 UBE2HP62256 183 aa11.77□□□□□ -0.53
EXOSC1-203ENST00000370886 STRN3Q13033 797 aa11.77□□□□□ -0.53
EXOSC1-203ENST00000370886 SMAD4Q13485 552 aaKnown RBP11.77□□□□□ -0.53
EXOSC1-203ENST00000370886 PRPF4BQ13523 1007 aaKnown RBP11.77□□□□□ -0.53
EXOSC1-203ENST00000370886 MAPK6Q16659 721 aa11.77□□□□□ -0.53
EXOSC1-203ENST00000370886 TWF2Q6IBS0 349 aaKnown RBP11.77□□□□□ -0.53
EXOSC1-203ENST00000370886 RNF135Q8IUD6 432 aa11.77□□□□□ -0.53
EXOSC1-203ENST00000370886 FMR1NBQ8N0W7 255 aaPredicted RBP11.77□□□□□ -0.53
EXOSC1-203ENST00000370886 TMEM87AQ8NBN3 555 aa11.77□□□□□ -0.53
EXOSC1-203ENST00000370886 HPS3Q969F9 1004 aa11.77□□□□□ -0.53
EXOSC1-203ENST00000370886 DNAJC19Q96DA6 116 aa11.77□□□□□ -0.53
EXOSC1-203ENST00000370886 CCDC34Q96HJ3 373 aa11.77□□□□□ -0.53
EXOSC1-203ENST00000370886 PHOX2BQ99453 314 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms