RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 CASP5P51878 434 aa17.05■□□□□ 0.32
PRPF38B-202ENST00000370022 FAM189BP81408 668 aa17.05■□□□□ 0.32
PRPF38B-202ENST00000370022 EPM2AIP1Q7L775 607 aaPredicted RBP17.05■□□□□ 0.32
PRPF38B-202ENST00000370022 HPS3Q969F9 1004 aa17.05■□□□□ 0.32
PRPF38B-202ENST00000370022 CPB2Q96IY4 423 aa17.05■□□□□ 0.32
PRPF38B-202ENST00000370022 ACO2Q99798 780 aaKnown RBP17.05■□□□□ 0.32
PRPF38B-202ENST00000370022 NUP62CLQ9H1M0 184 aa17.05■□□□□ 0.32
PRPF38B-202ENST00000370022 ELAC1Q9H777 363 aaKnown RBP17.05■□□□□ 0.32
PRPF38B-202ENST00000370022 HNRNPDLO14979 420 aaKnown RBP17.04■□□□□ 0.32
PRPF38B-202ENST00000370022 ZNF623O75123 536 aa17.04■□□□□ 0.32
PRPF38B-202ENST00000370022 TOM1L1O75674 476 aa17.04■□□□□ 0.32
PRPF38B-202ENST00000370022 SLC34A2O95436 690 aa17.04■□□□□ 0.32
PRPF38B-202ENST00000370022 EOMESO95936 686 aa17.04■□□□□ 0.32
PRPF38B-202ENST00000370022 STAG3L1P0CL83 205 aa17.04■□□□□ 0.32
PRPF38B-202ENST00000370022 LIG4P49917 911 aa17.04■□□□□ 0.32
PRPF38B-202ENST00000370022 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.04■□□□□ 0.32
PRPF38B-202ENST00000370022 ZNF507Q8TCN5 953 aa17.04■□□□□ 0.32
PRPF38B-202ENST00000370022 BICD1Q96G01 975 aa17.04■□□□□ 0.32
PRPF38B-202ENST00000370022 TARS2Q9BW92 718 aaKnown RBP17.04■□□□□ 0.32
PRPF38B-202ENST00000370022 PDZD7Q9H5P4 517 aa17.04■□□□□ 0.32
PRPF38B-202ENST00000370022 SLC39A2Q9NP94 309 aa17.04■□□□□ 0.32
PRPF38B-202ENST00000370022 FAM105AQ9NUU6 356 aa17.04■□□□□ 0.32
PRPF38B-202ENST00000370022 CXXC1Q9P0U4 656 aaPredicted RBP17.04■□□□□ 0.32
PRPF38B-202ENST00000370022 TTLL13PA6NNM8 815 aa17.03■□□□□ 0.32
PRPF38B-202ENST00000370022 EDN1P05305 212 aa17.03■□□□□ 0.32
PRPF38B-202ENST00000370022 PROZP22891 400 aa17.03■□□□□ 0.32
PRPF38B-202ENST00000370022 STK4Q13043 487 aa17.03■□□□□ 0.32
PRPF38B-202ENST00000370022 CAMK4Q16566 473 aa17.03■□□□□ 0.32
PRPF38B-202ENST00000370022 BMT2Q1RMZ1 405 aa17.03■□□□□ 0.32
PRPF38B-202ENST00000370022 DCAF4L1Q3SXM0 396 aa17.03■□□□□ 0.32
PRPF38B-202ENST00000370022 UBXN11Q5T124 520 aa17.03■□□□□ 0.32
PRPF38B-202ENST00000370022 NPAS4Q8IUM7 802 aa17.03■□□□□ 0.32
PRPF38B-202ENST00000370022 TOP1MTQ969P6 601 aa17.03■□□□□ 0.32
PRPF38B-202ENST00000370022 FGFBP2Q9BYJ0 223 aa17.03■□□□□ 0.32
PRPF38B-202ENST00000370022 TRIM6Q9C030 488 aaPredicted RBP17.03■□□□□ 0.32
PRPF38B-202ENST00000370022 PTPRHQ9HD43 1115 aa17.03■□□□□ 0.32
PRPF38B-202ENST00000370022 TMEM161AQ9NX61 479 aa17.03■□□□□ 0.32
PRPF38B-202ENST00000370022 KIAA1468Q9P260 1216 aa17.03■□□□□ 0.32
PRPF38B-202ENST00000370022 ATP2A2P16615 1042 aaKnown RBP17.02■□□□□ 0.32
PRPF38B-202ENST00000370022 SLFN12LQ6IEE8 588 aa17.02■□□□□ 0.32
PRPF38B-202ENST00000370022 MPZL3Q6UWV2 235 aa17.02■□□□□ 0.32
PRPF38B-202ENST00000370022 ECHDC2Q86YB7 292 aa17.02■□□□□ 0.32
PRPF38B-202ENST00000370022 HACE1Q8IYU2 909 aa17.02■□□□□ 0.32
PRPF38B-202ENST00000370022 MYOCDQ8IZQ8 938 aa17.02■□□□□ 0.32
PRPF38B-202ENST00000370022 SYCP3Q8IZU3 236 aa17.02■□□□□ 0.32
PRPF38B-202ENST00000370022 CRIPAKQ8N1N5 446 aa17.02■□□□□ 0.32
PRPF38B-202ENST00000370022 TRIML1Q8N9V2 468 aa17.02■□□□□ 0.32
PRPF38B-202ENST00000370022 KIAA0895Q8NCT3 520 aa17.02■□□□□ 0.32
PRPF38B-202ENST00000370022 SCFD1Q8WVM8 642 aa17.02■□□□□ 0.32
PRPF38B-202ENST00000370022 RSPH1Q8WYR4 309 aa17.02■□□□□ 0.32
PRPF38B-202ENST00000370022 PGBD4Q96DM1 585 aa17.02■□□□□ 0.32
PRPF38B-202ENST00000370022 TCHPQ9BT92 498 aa17.02■□□□□ 0.32
PRPF38B-202ENST00000370022 LRFN2Q9ULH4 789 aa17.02■□□□□ 0.32
PRPF38B-202ENST00000370022 PCDHB7Q9Y5E2 793 aa17.02■□□□□ 0.32
PRPF38B-202ENST00000370022 PCDHB2Q9Y5E7 798 aa17.02■□□□□ 0.32
PRPF38B-202ENST00000370022 MICAL3Q7RTP6 2002 aa17.02■□□□□ 0.32
PRPF38B-202ENST00000370022 CLDN3O15551 220 aa17.02■□□□□ 0.31
PRPF38B-202ENST00000370022 PRPF6O94906 941 aaKnown RBP17.02■□□□□ 0.31
PRPF38B-202ENST00000370022 MCF2P10911 925 aa17.02■□□□□ 0.31
PRPF38B-202ENST00000370022 SNRPFP62306 86 aaKnown RBP17.02■□□□□ 0.31
PRPF38B-202ENST00000370022 DEFB103AP81534 67 aa17.02■□□□□ 0.31
PRPF38B-202ENST00000370022 ZNF568Q3ZCX4 644 aa17.02■□□□□ 0.31
PRPF38B-202ENST00000370022 ZNF658Q5TYW1 1059 aaPredicted RBP17.02■□□□□ 0.31
PRPF38B-202ENST00000370022 GLIS3Q8NEA6 775 aa17.02■□□□□ 0.31
PRPF38B-202ENST00000370022 ERCC4Q92889 916 aaPredicted RBP17.02■□□□□ 0.31
PRPF38B-202ENST00000370022 USP20Q9Y2K6 914 aa17.02■□□□□ 0.31
PRPF38B-202ENST00000370022 HOXA2O43364 376 aa17.01■□□□□ 0.31
PRPF38B-202ENST00000370022 NPTXRO95502 500 aa17.01■□□□□ 0.31
PRPF38B-202ENST00000370022 PPP1R2P41236 205 aa17.01■□□□□ 0.31
PRPF38B-202ENST00000370022 MCL1Q07820 350 aa17.01■□□□□ 0.31
PRPF38B-202ENST00000370022 KCNA1Q09470 495 aa17.01■□□□□ 0.31
PRPF38B-202ENST00000370022 COBLL1Q53SF7 1204 aa17.01■□□□□ 0.31
PRPF38B-202ENST00000370022 MRPL10Q7Z7H8 261 aaKnown RBP17.01■□□□□ 0.31
PRPF38B-202ENST00000370022 ZNF598Q86UK7 904 aaKnown RBP17.01■□□□□ 0.31
PRPF38B-202ENST00000370022 HERC6Q8IVU3 1022 aa17.01■□□□□ 0.31
PRPF38B-202ENST00000370022 SYAP1Q96A49 352 aaPredicted RBP17.01■□□□□ 0.31
PRPF38B-202ENST00000370022 EIF2AQ9BY44 585 aaKnown RBP17.01■□□□□ 0.31
PRPF38B-202ENST00000370022 GBP3Q9H0R5 595 aa17.01■□□□□ 0.31
PRPF38B-202ENST00000370022 UBN1Q9NPG3 1134 aa17.01■□□□□ 0.31
PRPF38B-202ENST00000370022 CGNQ9P2M7 1197 aaKnown RBP17.01■□□□□ 0.31
PRPF38B-202ENST00000370022 COLQQ9Y215 455 aaPredicted RBP17.01■□□□□ 0.31
PRPF38B-202ENST00000370022 STYXL1Q9Y6J8 313 aa17.01■□□□□ 0.31
PRPF38B-202ENST00000370022 CEP290O15078 2479 aa17■□□□□ 0.31
PRPF38B-202ENST00000370022 HSFX4A0A1B0GTS1 333 aaPredicted RBP17■□□□□ 0.31
PRPF38B-202ENST00000370022 HSFX3A0A1B0GWH4 333 aaPredicted RBP17■□□□□ 0.31
PRPF38B-202ENST00000370022 ABLIM1O14639 778 aa17■□□□□ 0.31
PRPF38B-202ENST00000370022 GJB5O95377 273 aa17■□□□□ 0.31
PRPF38B-202ENST00000370022 NOLC1Q14978 699 aaKnown RBP eCLIP17■□□□□ 0.31
PRPF38B-202ENST00000370022 KYAT1Q16773 422 aa17■□□□□ 0.31
PRPF38B-202ENST00000370022 KNOP1Q1ED39 458 aaKnown RBP17■□□□□ 0.31
PRPF38B-202ENST00000370022 KLHL40Q2TBA0 621 aa17■□□□□ 0.31
PRPF38B-202ENST00000370022 SKOR2Q2VWA4 1001 aaPredicted RBP17■□□□□ 0.31
PRPF38B-202ENST00000370022 EEF1DP3Q658K8 133 aa17■□□□□ 0.31
PRPF38B-202ENST00000370022 CDR2LQ86X02 465 aaPredicted RBP17■□□□□ 0.31
PRPF38B-202ENST00000370022 GUF1Q8N442 669 aaKnown RBP17■□□□□ 0.31
PRPF38B-202ENST00000370022 CDT1Q9H211 546 aa17■□□□□ 0.31
PRPF38B-202ENST00000370022 ANKFY1Q9P2R3 1169 aa17■□□□□ 0.31
PRPF38B-202ENST00000370022 MAN1B1Q9UKM7 699 aa17■□□□□ 0.31
PRPF38B-202ENST00000370022 GDAQ9Y2T3 454 aa17■□□□□ 0.31
PRPF38B-202ENST00000370022 IPPQ9Y573 584 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms