RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 CUL3Q13618 768 aa13.19□□□□□ -0.3
HCFC1-202ENST00000369984 FLAD1Q8NFF5 587 aa13.19□□□□□ -0.3
HCFC1-202ENST00000369984 NDFIP2Q9NV92 336 aa13.19□□□□□ -0.3
HCFC1-202ENST00000369984 ZNF608Q9ULD9 1512 aaPredicted RBP13.19□□□□□ -0.3
HCFC1-202ENST00000369984 UBA6A0AVT1 1052 aaPredicted RBP13.19□□□□□ -0.3
HCFC1-202ENST00000369984 JAK3P52333 1124 aa13.19□□□□□ -0.3
HCFC1-202ENST00000369984 SMAD1Q15797 465 aaKnown RBP13.19□□□□□ -0.3
HCFC1-202ENST00000369984 BTN2A2Q8WVV5 523 aa13.19□□□□□ -0.3
HCFC1-202ENST00000369984 BPIFA3Q9BQP9 254 aa13.19□□□□□ -0.3
HCFC1-202ENST00000369984 PRKAB2O43741 272 aa13.18□□□□□ -0.3
HCFC1-202ENST00000369984 PGM1P36871 562 aa13.18□□□□□ -0.3
HCFC1-202ENST00000369984 WASHC5Q12768 1159 aa13.18□□□□□ -0.3
HCFC1-202ENST00000369984 KCNH2Q12809 1159 aa13.18□□□□□ -0.3
HCFC1-202ENST00000369984 EHD2Q9NZN4 543 aa13.18□□□□□ -0.3
HCFC1-202ENST00000369984 CAB39Q9Y376 341 aaPredicted RBP13.18□□□□□ -0.3
HCFC1-202ENST00000369984 INSRP06213 1382 aa13.18□□□□□ -0.3
HCFC1-202ENST00000369984 SUPT20HL1Q3ZLR7 823 aa13.18□□□□□ -0.3
HCFC1-202ENST00000369984 ATP11CQ8NB49 1132 aa13.18□□□□□ -0.3
HCFC1-202ENST00000369984 CNKSR1Q969H4 720 aa13.18□□□□□ -0.3
HCFC1-202ENST00000369984 HDAC6Q9UBN7 1215 aa13.18□□□□□ -0.3
HCFC1-202ENST00000369984 TRIM49BA6NDI0 452 aa13.18□□□□□ -0.3
HCFC1-202ENST00000369984 IFNAR1P17181 557 aa13.18□□□□□ -0.3
HCFC1-202ENST00000369984 TBXAS1P24557 533 aaPredicted RBP13.18□□□□□ -0.3
HCFC1-202ENST00000369984 PSMA3P25788 255 aa13.18□□□□□ -0.3
HCFC1-202ENST00000369984 CHRNA3P32297 505 aa13.18□□□□□ -0.3
HCFC1-202ENST00000369984 PRCPP42785 496 aa13.18□□□□□ -0.3
HCFC1-202ENST00000369984 MTMR1Q13613 665 aa13.18□□□□□ -0.3
HCFC1-202ENST00000369984 SLC10A5Q5PT55 438 aa13.18□□□□□ -0.3
HCFC1-202ENST00000369984 CNGB3Q9NQW8 809 aa13.18□□□□□ -0.3
HCFC1-202ENST00000369984 QRICH2Q9H0J4 1663 aa13.18□□□□□ -0.3
HCFC1-202ENST00000369984 IL17REQ8NFR9 667 aa13.18□□□□□ -0.3
HCFC1-202ENST00000369984 THAP11Q96EK4 314 aa13.18□□□□□ -0.3
HCFC1-202ENST00000369984 STAMBPL1Q96FJ0 436 aa13.18□□□□□ -0.3
HCFC1-202ENST00000369984 SLC9A2Q9UBY0 812 aa13.18□□□□□ -0.3
HCFC1-202ENST00000369984 PZPP20742 1482 aa13.18□□□□□ -0.3
HCFC1-202ENST00000369984 DFFAO00273 331 aa13.18□□□□□ -0.3
HCFC1-202ENST00000369984 DDX5P17844 614 aaKnown RBP13.18□□□□□ -0.3
HCFC1-202ENST00000369984 CRKLP46109 303 aaKnown RBP13.18□□□□□ -0.3
HCFC1-202ENST00000369984 GPC3P51654 580 aa13.18□□□□□ -0.3
HCFC1-202ENST00000369984 RBM46Q8TBY0 533 aaKnown RBP13.18□□□□□ -0.3
HCFC1-202ENST00000369984 DDX56Q9NY93 547 aaKnown RBP13.18□□□□□ -0.3
HCFC1-202ENST00000369984 ANGPT2O15123 496 aa13.18□□□□□ -0.3
HCFC1-202ENST00000369984 KDSRQ06136 332 aa13.18□□□□□ -0.3
HCFC1-202ENST00000369984 GIMAP8Q8ND71 665 aaPredicted RBP13.18□□□□□ -0.3
HCFC1-202ENST00000369984 TRIM54Q9BYV2 358 aa13.18□□□□□ -0.3
HCFC1-202ENST00000369984 CROCC2H7BZ55 1655 aa13.17□□□□□ -0.3
HCFC1-202ENST00000369984 DEAF1O75398 565 aaPredicted RBP13.17□□□□□ -0.3
HCFC1-202ENST00000369984 GCLMP48507 274 aa13.17□□□□□ -0.3
HCFC1-202ENST00000369984 ZNF211Q13398 564 aaPredicted RBP13.17□□□□□ -0.3
HCFC1-202ENST00000369984 INPP5AQ14642 412 aa13.17□□□□□ -0.3
HCFC1-202ENST00000369984 NCAPHQ15003 741 aa13.17□□□□□ -0.3
HCFC1-202ENST00000369984 AHI1Q8N157 1196 aa13.17□□□□□ -0.3
HCFC1-202ENST00000369984 TMEM35BQ8NCS4 154 aa13.17□□□□□ -0.3
HCFC1-202ENST00000369984 FGFR4P22455 802 aa13.17□□□□□ -0.3
HCFC1-202ENST00000369984 LVRNQ6Q4G3 990 aa13.17□□□□□ -0.3
HCFC1-202ENST00000369984 SCN4BQ8IWT1 228 aa13.17□□□□□ -0.3
HCFC1-202ENST00000369984 SELENONQ9NZV5 590 aa13.17□□□□□ -0.3
HCFC1-202ENST00000369984 RNF25Q96BH1 459 aaPredicted RBP13.17□□□□□ -0.3
HCFC1-202ENST00000369984 DHX36Q9H2U1 1008 aaKnown RBP13.17□□□□□ -0.3
HCFC1-202ENST00000369984 AIPL1Q9NZN9 384 aa13.17□□□□□ -0.3
HCFC1-202ENST00000369984 GGPS1O95749 300 aa13.17□□□□□ -0.3
HCFC1-202ENST00000369984 SARM1Q6SZW1 724 aa13.17□□□□□ -0.3
HCFC1-202ENST00000369984 DYNLL2Q96FJ2 89 aa13.17□□□□□ -0.3
HCFC1-202ENST00000369984 MAD2L2Q9UI95 211 aa13.17□□□□□ -0.3
HCFC1-202ENST00000369984 PCDHGB4Q9UN71 923 aa13.17□□□□□ -0.3
HCFC1-202ENST00000369984 EIF2AK2P19525 551 aaKnown RBP13.17□□□□□ -0.3
HCFC1-202ENST00000369984 TYK2P29597 1187 aa13.17□□□□□ -0.3
HCFC1-202ENST00000369984 TFDP2Q14188 446 aa13.17□□□□□ -0.3
HCFC1-202ENST00000369984 ZNF568Q3ZCX4 644 aa13.17□□□□□ -0.3
HCFC1-202ENST00000369984 MIGA2Q7L4E1 593 aa13.17□□□□□ -0.3
HCFC1-202ENST00000369984 AIFM3Q96NN9 605 aa13.17□□□□□ -0.3
HCFC1-202ENST00000369984 DBNDD1Q9H9R9 158 aa13.17□□□□□ -0.3
HCFC1-202ENST00000369984 KIAA1586Q9HCI6 787 aa13.17□□□□□ -0.3
HCFC1-202ENST00000369984 NPHS2Q9NP85 383 aa13.17□□□□□ -0.3
HCFC1-202ENST00000369984 GPR108Q9NPR9 543 aa13.17□□□□□ -0.3
HCFC1-202ENST00000369984 HUS1O60921 280 aa13.17□□□□□ -0.3
HCFC1-202ENST00000369984 SSTR3P32745 418 aaPredicted RBP13.17□□□□□ -0.3
HCFC1-202ENST00000369984 CUL4AQ13619 759 aa13.17□□□□□ -0.3
HCFC1-202ENST00000369984 SPDYAQ5MJ70 313 aa13.17□□□□□ -0.3
HCFC1-202ENST00000369984 SH3KBP1Q96B97 665 aa13.17□□□□□ -0.3
HCFC1-202ENST00000369984 MRPS26Q9BYN8 205 aaKnown RBP13.17□□□□□ -0.3
HCFC1-202ENST00000369984 OSBPL3Q9H4L5 887 aa13.17□□□□□ -0.3
HCFC1-202ENST00000369984 CYP2D7A0A087X1C5 515 aa13.17□□□□□ -0.3
HCFC1-202ENST00000369984 GUCY1A3Q02108 690 aa13.17□□□□□ -0.3
HCFC1-202ENST00000369984 TNFAIP2Q03169 654 aa13.17□□□□□ -0.3
HCFC1-202ENST00000369984 OR6P1Q8NGX9 317 aa13.17□□□□□ -0.3
HCFC1-202ENST00000369984 FAM49AQ9H0Q0 323 aaPredicted RBP13.17□□□□□ -0.3
HCFC1-202ENST00000369984 FTLP02792 175 aaPredicted RBP13.16□□□□□ -0.3
HCFC1-202ENST00000369984 MLH1P40692 756 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 VAMP7P51809 220 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 CCDC142Q17RM4 750 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 LRRC36Q1X8D7 754 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 DCAF4L1Q3SXM0 396 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 NUP93Q8N1F7 819 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 RNPEPQ9H4A4 650 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 TMEM161AQ9NX61 479 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 PCSK1NQ9UHG2 260 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 MYBL1P10243 752 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 PYGMP11217 842 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 ARSEP51690 589 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms