RNA–Protein interactions for RNA: ENST00000360286.2

SUDS3-201, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-201ENST00000360286 GBF1Q92538 1859 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 A0A0U1RQF3 1178 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 MEIS3P2A8K0S8 358 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 TISP43B9A030 160 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 ANKRD63C9JTQ0 380 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 KINO60870 393 aaKnown RBP7.05□□□□□ -1.28
SUDS3-201ENST00000360286 PPP1R37O75864 691 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 FGFR1P11362 822 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 ATF7P17544 494 aaPredicted RBP7.05□□□□□ -1.28
SUDS3-201ENST00000360286 AKAP5P24588 427 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 HOXD11P31277 338 aaPredicted RBP7.05□□□□□ -1.28
SUDS3-201ENST00000360286 MCM4P33991 863 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 HOXD13P35453 343 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 EHHADHQ08426 723 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 STRN3Q13033 797 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 STK4Q13043 487 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 PCBP1Q15365 356 aaKnown RBP eCLIP7.05□□□□□ -1.28
SUDS3-201ENST00000360286 CAMK4Q16566 473 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 L1TD1Q5T7N2 865 aaKnown RBP7.05□□□□□ -1.28
SUDS3-201ENST00000360286 ATF7IP2Q5U623 682 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 ISM2Q6H9L7 571 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 NOTUMQ6P988 496 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 MRPL10Q7Z7H8 261 aaKnown RBP7.05□□□□□ -1.28
SUDS3-201ENST00000360286 ZNF598Q86UK7 904 aaKnown RBP7.05□□□□□ -1.28
SUDS3-201ENST00000360286 HERC6Q8IVU3 1022 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 RNF169Q8NCN4 708 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 SMG8Q8ND04 991 aaKnown RBP7.05□□□□□ -1.28
SUDS3-201ENST00000360286 ZNF507Q8TCN5 953 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 PRIMPOLQ96LW4 560 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 SLC9A7Q96T83 725 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 ZBED2Q9BTP6 218 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 APOL6Q9BWW8 343 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 MRPL4Q9BYD3 311 aaKnown RBP7.05□□□□□ -1.28
SUDS3-201ENST00000360286 HAPLN2Q9GZV7 340 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 MTIF3Q9H2K0 278 aaKnown RBP7.05□□□□□ -1.28
SUDS3-201ENST00000360286 ST6GALNAC4Q9H4F1 302 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 PTPRHQ9HD43 1115 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 OLFML3Q9NRN5 406 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 C1orf112Q9NSG2 853 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 FAM105AQ9NUU6 356 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 RNF19AQ9NV58 838 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 SEL1LQ9UBV2 794 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 LRFN2Q9ULH4 789 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 TNFSF13BQ9Y275 285 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 HES2Q9Y543 173 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 PCDHB2Q9Y5E7 798 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 PCDHB13Q9Y5F0 798 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 PCDHA5Q9Y5H7 936 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 CNTNAP2Q9UHC6 1331 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 TRIP11Q15643 1979 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 A0A1W2PPC1 479 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 LCHNA4D1U4 455 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 H0YCG3 227 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 GOLGA6L22H0YM25 854 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 SOX1O00570 391 aaPredicted RBP7.04□□□□□ -1.28
SUDS3-201ENST00000360286 ABLIM1O14639 778 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 N4BP3O15049 544 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 TLL1O43897 1013 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 ZNF623O75123 536 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 DGKIO75912 1065 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 ARHGEF15O94989 841 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 GJB5O95377 273 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 EOMESO95936 686 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 MYL1P05976 194 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 STAG3L1P0CL83 205 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 HARSP12081 509 aaKnown RBP7.04□□□□□ -1.28
SUDS3-201ENST00000360286 ITGA4P13612 1032 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 PROZP22891 400 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 MATR3P43243 847 aaKnown RBP eCLIP7.04□□□□□ -1.28
SUDS3-201ENST00000360286 AFF1P51825 1210 aaKnown RBP7.04□□□□□ -1.28
SUDS3-201ENST00000360286 HTRA4P83105 476 aaPredicted RBP7.04□□□□□ -1.28
SUDS3-201ENST00000360286 PSMD2Q13200 908 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 HSP90AA2PQ14568 343 aaPredicted RBP7.04□□□□□ -1.28
SUDS3-201ENST00000360286 LRIT3Q3SXY7 679 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 PAN2Q504Q3 1202 aaKnown RBP7.04□□□□□ -1.28
SUDS3-201ENST00000360286 SEZ6Q53EL9 994 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 FAM26FQ5R3K3 315 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 SLC39A4Q6P5W5 647 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 SLC27A1Q6PCB7 646 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 AGMOQ6ZNB7 445 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 EPM2AIP1Q7L775 607 aaPredicted RBP7.04□□□□□ -1.28
SUDS3-201ENST00000360286 NPAS4Q8IUM7 802 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 NELFCDQ8IXH7 590 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 TMEM192Q8IY95 271 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 ELOA2Q8IYF1 753 aaPredicted RBP7.04□□□□□ -1.28
SUDS3-201ENST00000360286 CEP120Q8N960 986 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 KIAA0895Q8NCT3 520 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 HELQQ8TDG4 1101 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 SCFD1Q8WVM8 642 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 KCNN1Q92952 543 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 ZNF689Q96CS4 500 aaPredicted RBP7.04□□□□□ -1.28
SUDS3-201ENST00000360286 CCDC51Q96ER9 411 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 BICD1Q96G01 975 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 CASD1Q96PB1 797 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 ACCSQ96QU6 501 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 RAD9AQ99638 391 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 TCHPQ9BT92 498 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 TRAIPQ9BWF2 469 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 PBX4Q9BYU1 374 aa7.04□□□□□ -1.28
SUDS3-201ENST00000360286 TRIM6Q9C030 488 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms