RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 FAM167BQ9BTA0 163 aa14.61□□□□□ -0.07
VCP-201ENST00000358901 TRAIPQ9BWF2 469 aa14.61□□□□□ -0.07
VCP-201ENST00000358901 CELF4Q9BZC1 486 aaKnown RBP14.61□□□□□ -0.07
VCP-201ENST00000358901 FAM49AQ9H0Q0 323 aaPredicted RBP14.61□□□□□ -0.07
VCP-201ENST00000358901 PSD3Q9NYI0 1048 aa14.61□□□□□ -0.07
VCP-201ENST00000358901 FNDC3AQ9Y2H6 1198 aaKnown RBP14.61□□□□□ -0.07
VCP-201ENST00000358901 A0A1W2PQJ5 194 aa14.6□□□□□ -0.07
VCP-201ENST00000358901 PI4K2BG5E9Z4 385 aa14.6□□□□□ -0.07
VCP-201ENST00000358901 RTN2O75298 545 aa14.6□□□□□ -0.07
VCP-201ENST00000358901 NTSR2O95665 410 aa14.6□□□□□ -0.07
VCP-201ENST00000358901 STXBP2Q15833 593 aa14.6□□□□□ -0.07
VCP-201ENST00000358901 KLHL38Q2WGJ6 581 aa14.6□□□□□ -0.07
VCP-201ENST00000358901 MMGT1Q8N4V1 131 aa14.6□□□□□ -0.07
VCP-201ENST00000358901 TBC1D16Q8TBP0 767 aa14.6□□□□□ -0.07
VCP-201ENST00000358901 STOML1Q9UBI4 398 aa14.6□□□□□ -0.07
VCP-201ENST00000358901 GGPS1O95749 300 aa14.6□□□□□ -0.07
VCP-201ENST00000358901 THOC5Q13769 683 aaKnown RBP14.6□□□□□ -0.07
VCP-201ENST00000358901 PIP4K2CQ8TBX8 421 aa14.6□□□□□ -0.07
VCP-201ENST00000358901 AGXT2Q9BYV1 514 aa14.6□□□□□ -0.07
VCP-201ENST00000358901 RBAKQ9NYW8 714 aaPredicted RBP14.6□□□□□ -0.07
VCP-201ENST00000358901 STRIP2Q9ULQ0 834 aa14.6□□□□□ -0.07
VCP-201ENST00000358901 ZHX2Q9Y6X8 837 aa14.6□□□□□ -0.07
VCP-201ENST00000358901 A0A087X0T9 212 aa14.6□□□□□ -0.07
VCP-201ENST00000358901 GOLGA8QA0A0J9YX86 632 aa14.6□□□□□ -0.07
VCP-201ENST00000358901 GOLGA8OA6NCC3 632 aa14.6□□□□□ -0.07
VCP-201ENST00000358901 SPECC1L-ADORA2AF8WAN1 911 aa14.6□□□□□ -0.07
VCP-201ENST00000358901 GOLGA8NF8WBI6 632 aa14.6□□□□□ -0.07
VCP-201ENST00000358901 FAM228BP0C875 321 aa14.6□□□□□ -0.07
VCP-201ENST00000358901 KITP10721 976 aa14.6□□□□□ -0.07
VCP-201ENST00000358901 ADRA2BP18089 450 aa14.6□□□□□ -0.07
VCP-201ENST00000358901 TBXAS1P24557 533 aaPredicted RBP14.6□□□□□ -0.07
VCP-201ENST00000358901 NTRK3Q16288 839 aa14.6□□□□□ -0.07
VCP-201ENST00000358901 RC3H1Q5TC82 1133 aaKnown RBP14.6□□□□□ -0.07
VCP-201ENST00000358901 PSPC1Q8WXF1 523 aaKnown RBP14.6□□□□□ -0.07
VCP-201ENST00000358901 ECT2Q9H8V3 914 aa14.6□□□□□ -0.07
VCP-201ENST00000358901 FGFR1OP2Q9NVK5 253 aa14.6□□□□□ -0.07
VCP-201ENST00000358901 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.6□□□□□ -0.07
VCP-201ENST00000358901 KCNJ1P48048 391 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 ARFIP2P53365 341 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 ENOSF1Q7L5Y1 443 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 LRRC43Q8N309 656 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 USP38Q8NB14 1042 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 ATL2Q8NHH9 583 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 ZNF526Q8TF50 670 aaPredicted RBP14.59□□□□□ -0.07
VCP-201ENST00000358901 NUDCD1Q96RS6 583 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 TUFT1Q9NNX1 390 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 IP6K2Q9UHH9 426 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 CAPN6Q9Y6Q1 641 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 CFAP69A5D8W1 941 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 PFDN6O15212 129 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 SLC16A3O15427 465 aaKnown RBP14.59□□□□□ -0.07
VCP-201ENST00000358901 HSPA4LO95757 839 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 SLC4A1P02730 911 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 PDHA1P08559 390 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 KRT7P08729 469 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 CHN1P15882 459 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 ARSEP51690 589 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 DPY19L2Q6NUT2 758 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 PRMT1Q99873 361 aaKnown RBP14.59□□□□□ -0.07
VCP-201ENST00000358901 NBPF3Q9H094 633 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 ASNSD1Q9NWL6 643 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 DBR1Q9UK59 544 aaKnown RBP14.59□□□□□ -0.07
VCP-201ENST00000358901 AGO2Q9UKV8 859 aaKnown RBP14.59□□□□□ -0.07
VCP-201ENST00000358901 BAG5Q9UL15 447 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 PCDHA10Q9Y5I2 948 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 KRT3P12035 628 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 C16orf86Q6ZW13 317 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 ATP11CQ8NB49 1132 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 SDCCAG3Q96C92 435 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 EFHD1Q9BUP0 239 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 SMYD3Q9H7B4 428 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 DMGDHQ9UI17 866 aaKnown RBP14.59□□□□□ -0.07
VCP-201ENST00000358901 INPP5FQ9Y2H2 1132 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 AGTP01019 485 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 HSPA9P38646 679 aaKnown RBP14.59□□□□□ -0.07
VCP-201ENST00000358901 CDR2Q01850 454 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 BZW1Q7L1Q6 419 aaKnown RBP14.59□□□□□ -0.07
VCP-201ENST00000358901 ARMCX2Q7L311 632 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 RTKN2Q8IZC4 609 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 ATP6V1E2Q96A05 226 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 FAM193BQ96PV7 902 aaPredicted RBP14.59□□□□□ -0.07
VCP-201ENST00000358901 SLC13A1Q9BZW2 595 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 POLR3FQ9H1D9 316 aaPredicted RBP14.59□□□□□ -0.07
VCP-201ENST00000358901 VPS11Q9H270 941 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 JMJD4Q9H9V9 463 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 ALG13Q9NP73 1137 aaKnown RBP14.59□□□□□ -0.07
VCP-201ENST00000358901 HSPBP1Q9NZL4 362 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 APOBEC2Q9Y235 224 aaKnown RBP14.59□□□□□ -0.07
VCP-201ENST00000358901 ALG6Q9Y672 507 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 C1orf167Q5SNV9 1468 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 LRRIQ1Q96JM4 1722 aa14.59□□□□□ -0.07
VCP-201ENST00000358901 ANXA13P27216 316 aa14.58□□□□□ -0.07
VCP-201ENST00000358901 EPHB1P54762 984 aa14.58□□□□□ -0.07
VCP-201ENST00000358901 BCAR1P56945 870 aa14.58□□□□□ -0.07
VCP-201ENST00000358901 LONRF1Q17RB8 773 aa14.58□□□□□ -0.07
VCP-201ENST00000358901 KRT80Q6KB66 452 aa14.58□□□□□ -0.07
VCP-201ENST00000358901 CATSPER4Q7RTX7 472 aa14.58□□□□□ -0.07
VCP-201ENST00000358901 TRAPPC11Q7Z392 1133 aa14.58□□□□□ -0.07
VCP-201ENST00000358901 GPD1LQ8N335 351 aa14.58□□□□□ -0.07
VCP-201ENST00000358901 KLHL11Q9NVR0 708 aa14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms