RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 KLHL40Q2TBA0 621 aa17.04■□□□□ 0.32
TRIM13-201ENST00000356017 ZNF658Q5TYW1 1059 aaPredicted RBP17.04■□□□□ 0.32
TRIM13-201ENST00000356017 TRIML1Q8N9V2 468 aa17.04■□□□□ 0.32
TRIM13-201ENST00000356017 KIAA0895Q8NCT3 520 aa17.04■□□□□ 0.32
TRIM13-201ENST00000356017 RNPC3Q96LT9 517 aaKnown RBP17.04■□□□□ 0.32
TRIM13-201ENST00000356017 TCHPQ9BT92 498 aa17.04■□□□□ 0.32
TRIM13-201ENST00000356017 FGFBP2Q9BYJ0 223 aa17.04■□□□□ 0.32
TRIM13-201ENST00000356017 TRIM6Q9C030 488 aaPredicted RBP17.04■□□□□ 0.32
TRIM13-201ENST00000356017 SLC4A7Q9Y6M7 1214 aa17.04■□□□□ 0.32
TRIM13-201ENST00000356017 TNRC18O15417 2968 aaPredicted RBP17.04■□□□□ 0.32
TRIM13-201ENST00000356017 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.03■□□□□ 0.32
TRIM13-201ENST00000356017 C9IYK1 514 aa17.03■□□□□ 0.32
TRIM13-201ENST00000356017 PRPF6O94906 941 aaKnown RBP17.03■□□□□ 0.32
TRIM13-201ENST00000356017 FAM189BP81408 668 aa17.03■□□□□ 0.32
TRIM13-201ENST00000356017 SHHQ15465 462 aa17.03■□□□□ 0.32
TRIM13-201ENST00000356017 BMT2Q1RMZ1 405 aa17.03■□□□□ 0.32
TRIM13-201ENST00000356017 DCAF4L1Q3SXM0 396 aa17.03■□□□□ 0.32
TRIM13-201ENST00000356017 RASIP1Q5U651 963 aa17.03■□□□□ 0.32
TRIM13-201ENST00000356017 SLFN12LQ6IEE8 588 aa17.03■□□□□ 0.32
TRIM13-201ENST00000356017 MYOCDQ8IZQ8 938 aa17.03■□□□□ 0.32
TRIM13-201ENST00000356017 PHOSPHO2Q8TCD6 241 aa17.03■□□□□ 0.32
TRIM13-201ENST00000356017 SCFD1Q8WVM8 642 aa17.03■□□□□ 0.32
TRIM13-201ENST00000356017 LINC01599Q8WXQ3 324 aa17.03■□□□□ 0.32
TRIM13-201ENST00000356017 PDZD7Q9H5P4 517 aa17.03■□□□□ 0.32
TRIM13-201ENST00000356017 ELAC1Q9H777 363 aaKnown RBP17.03■□□□□ 0.32
TRIM13-201ENST00000356017 PTPRHQ9HD43 1115 aa17.03■□□□□ 0.32
TRIM13-201ENST00000356017 FAM105AQ9NUU6 356 aa17.03■□□□□ 0.32
TRIM13-201ENST00000356017 TTLL13PA6NNM8 815 aa17.03■□□□□ 0.32
TRIM13-201ENST00000356017 CLDN3O15551 220 aa17.03■□□□□ 0.32
TRIM13-201ENST00000356017 ZNF623O75123 536 aa17.03■□□□□ 0.32
TRIM13-201ENST00000356017 EOMESO95936 686 aa17.03■□□□□ 0.32
TRIM13-201ENST00000356017 EDN1P05305 212 aa17.03■□□□□ 0.32
TRIM13-201ENST00000356017 STAG3L1P0CL83 205 aa17.03■□□□□ 0.32
TRIM13-201ENST00000356017 PROZP22891 400 aa17.03■□□□□ 0.32
TRIM13-201ENST00000356017 PPP1R2P41236 205 aa17.03■□□□□ 0.32
TRIM13-201ENST00000356017 SNRPFP62306 86 aaKnown RBP17.03■□□□□ 0.32
TRIM13-201ENST00000356017 KCNA1Q09470 495 aa17.03■□□□□ 0.32
TRIM13-201ENST00000356017 C9orf50Q5SZB4 431 aa17.03■□□□□ 0.32
TRIM13-201ENST00000356017 CCDC183Q5T5S1 534 aa17.03■□□□□ 0.32
TRIM13-201ENST00000356017 PRPF38BQ5VTL8 546 aaKnown RBP17.03■□□□□ 0.32
TRIM13-201ENST00000356017 MPZL3Q6UWV2 235 aa17.03■□□□□ 0.32
TRIM13-201ENST00000356017 CHRDL2Q6WN34 429 aa17.03■□□□□ 0.32
TRIM13-201ENST00000356017 HACE1Q8IYU2 909 aa17.03■□□□□ 0.32
TRIM13-201ENST00000356017 GLIS3Q8NEA6 775 aa17.03■□□□□ 0.32
TRIM13-201ENST00000356017 SLC9A7Q96T83 725 aa17.03■□□□□ 0.32
TRIM13-201ENST00000356017 GBP3Q9H0R5 595 aa17.03■□□□□ 0.32
TRIM13-201ENST00000356017 CXXC1Q9P0U4 656 aaPredicted RBP17.03■□□□□ 0.32
TRIM13-201ENST00000356017 MAN1B1Q9UKM7 699 aa17.03■□□□□ 0.32
TRIM13-201ENST00000356017 USP20Q9Y2K6 914 aa17.03■□□□□ 0.32
TRIM13-201ENST00000356017 TET1Q8NFU7 2136 aa17.02■□□□□ 0.32
TRIM13-201ENST00000356017 KNOP1Q1ED39 458 aaKnown RBP17.02■□□□□ 0.31
TRIM13-201ENST00000356017 ZNF568Q3ZCX4 644 aa17.02■□□□□ 0.31
TRIM13-201ENST00000356017 COBLL1Q53SF7 1204 aa17.02■□□□□ 0.31
TRIM13-201ENST00000356017 UBXN11Q5T124 520 aa17.02■□□□□ 0.31
TRIM13-201ENST00000356017 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.02■□□□□ 0.31
TRIM13-201ENST00000356017 ECHDC2Q86YB7 292 aa17.02■□□□□ 0.31
TRIM13-201ENST00000356017 TDHQ8IZJ6 230 aa17.02■□□□□ 0.31
TRIM13-201ENST00000356017 GUF1Q8N442 669 aaKnown RBP17.02■□□□□ 0.31
TRIM13-201ENST00000356017 TOP1MTQ969P6 601 aa17.02■□□□□ 0.31
TRIM13-201ENST00000356017 PGBD4Q96DM1 585 aa17.02■□□□□ 0.31
TRIM13-201ENST00000356017 TMEM161AQ9NX61 479 aa17.02■□□□□ 0.31
TRIM13-201ENST00000356017 CGNQ9P2M7 1197 aaKnown RBP17.02■□□□□ 0.31
TRIM13-201ENST00000356017 LRFN2Q9ULH4 789 aa17.02■□□□□ 0.31
TRIM13-201ENST00000356017 PCDHB7Q9Y5E2 793 aa17.02■□□□□ 0.31
TRIM13-201ENST00000356017 PCDHB2Q9Y5E7 798 aa17.02■□□□□ 0.31
TRIM13-201ENST00000356017 MCF2P10911 925 aa17.01■□□□□ 0.31
TRIM13-201ENST00000356017 MATR3P43243 847 aaKnown RBP eCLIP17.01■□□□□ 0.31
TRIM13-201ENST00000356017 MCL1Q07820 350 aa17.01■□□□□ 0.31
TRIM13-201ENST00000356017 STIM1Q13586 685 aa17.01■□□□□ 0.31
TRIM13-201ENST00000356017 MORC3Q14149 939 aa17.01■□□□□ 0.31
TRIM13-201ENST00000356017 NFKBIBQ15653 356 aa17.01■□□□□ 0.31
TRIM13-201ENST00000356017 HS2ST1Q7LGA3 356 aa17.01■□□□□ 0.31
TRIM13-201ENST00000356017 CDR2LQ86X02 465 aaPredicted RBP17.01■□□□□ 0.31
TRIM13-201ENST00000356017 NPAS4Q8IUM7 802 aa17.01■□□□□ 0.31
TRIM13-201ENST00000356017 GOLGA5Q8TBA6 731 aa17.01■□□□□ 0.31
TRIM13-201ENST00000356017 EIF2AQ9BY44 585 aaKnown RBP17.01■□□□□ 0.31
TRIM13-201ENST00000356017 PRO3102Q9H379 93 aa17.01■□□□□ 0.31
TRIM13-201ENST00000356017 ANKFY1Q9P2R3 1169 aa17.01■□□□□ 0.31
TRIM13-201ENST00000356017 GDAQ9Y2T3 454 aa17.01■□□□□ 0.31
TRIM13-201ENST00000356017 STYXL1Q9Y6J8 313 aa17.01■□□□□ 0.31
TRIM13-201ENST00000356017 A0A1W2PPC1 479 aa17■□□□□ 0.31
TRIM13-201ENST00000356017 BIN1O00499 593 aa17■□□□□ 0.31
TRIM13-201ENST00000356017 NPTXRO95502 500 aa17■□□□□ 0.31
TRIM13-201ENST00000356017 ATP2A2P16615 1042 aaKnown RBP17■□□□□ 0.31
TRIM13-201ENST00000356017 HOXD13P35453 343 aa17■□□□□ 0.31
TRIM13-201ENST00000356017 NOLC1Q14978 699 aaKnown RBP eCLIP17■□□□□ 0.31
TRIM13-201ENST00000356017 KYAT1Q16773 422 aa17■□□□□ 0.31
TRIM13-201ENST00000356017 EEF1DP3Q658K8 133 aa17■□□□□ 0.31
TRIM13-201ENST00000356017 CAVIN1Q6NZI2 390 aaKnown RBP17■□□□□ 0.31
TRIM13-201ENST00000356017 RBM43Q6ZSC3 357 aaKnown RBP17■□□□□ 0.31
TRIM13-201ENST00000356017 MRPL10Q7Z7H8 261 aaKnown RBP17■□□□□ 0.31
TRIM13-201ENST00000356017 NELFCDQ8IXH7 590 aa17■□□□□ 0.31
TRIM13-201ENST00000356017 RSPH1Q8WYR4 309 aa17■□□□□ 0.31
TRIM13-201ENST00000356017 UBN1Q9NPG3 1134 aa17■□□□□ 0.31
TRIM13-201ENST00000356017 IPPQ9Y573 584 aa17■□□□□ 0.31
TRIM13-201ENST00000356017 PDE4DIPQ5VU43 2346 aa17■□□□□ 0.31
TRIM13-201ENST00000356017 RBAK-RBAKDNI3L0D1 243 aa16.99■□□□□ 0.31
TRIM13-201ENST00000356017 ABLIM1O14639 778 aa16.99■□□□□ 0.31
TRIM13-201ENST00000356017 KIAA0391O15091 583 aaKnown RBP16.99■□□□□ 0.31
TRIM13-201ENST00000356017 HOXA2O43364 376 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms