RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 GOLGA6L22H0YM25 854 aa15.31■□□□□ 0.04
SEC13-202ENST00000350697 KINO60870 393 aaKnown RBP15.31■□□□□ 0.04
SEC13-202ENST00000350697 RABGGTBP53611 331 aa15.31■□□□□ 0.04
SEC13-202ENST00000350697 HTRA4P83105 476 aaPredicted RBP15.31■□□□□ 0.04
SEC13-202ENST00000350697 ALCAMQ13740 583 aa15.31■□□□□ 0.04
SEC13-202ENST00000350697 ZNF598Q86UK7 904 aaKnown RBP15.31■□□□□ 0.04
SEC13-202ENST00000350697 CDR2LQ86X02 465 aaPredicted RBP15.31■□□□□ 0.04
SEC13-202ENST00000350697 HVCN1Q96D96 273 aa15.31■□□□□ 0.04
SEC13-202ENST00000350697 ACO2Q99798 780 aaKnown RBP15.31■□□□□ 0.04
SEC13-202ENST00000350697 ADPGKQ9BRR6 497 aa15.31■□□□□ 0.04
SEC13-202ENST00000350697 EIF2AQ9BY44 585 aaKnown RBP15.31■□□□□ 0.04
SEC13-202ENST00000350697 TRIM6Q9C030 488 aaPredicted RBP15.31■□□□□ 0.04
SEC13-202ENST00000350697 PDZD7Q9H5P4 517 aa15.31■□□□□ 0.04
SEC13-202ENST00000350697 TNFSF13BQ9Y275 285 aa15.31■□□□□ 0.04
SEC13-202ENST00000350697 INSL6Q9Y581 213 aa15.31■□□□□ 0.04
SEC13-202ENST00000350697 PCDHB13Q9Y5F0 798 aa15.31■□□□□ 0.04
SEC13-202ENST00000350697 GBF1Q92538 1859 aa15.31■□□□□ 0.04
SEC13-202ENST00000350697 HOXA2O43364 376 aa15.3■□□□□ 0.04
SEC13-202ENST00000350697 KLRC4O43908 158 aa15.3■□□□□ 0.04
SEC13-202ENST00000350697 PPP1R37O75864 691 aa15.3■□□□□ 0.04
SEC13-202ENST00000350697 DGKIO75912 1065 aa15.3■□□□□ 0.04
SEC13-202ENST00000350697 GCNT3O95395 438 aa15.3■□□□□ 0.04
SEC13-202ENST00000350697 ATF7P17544 494 aaPredicted RBP15.3■□□□□ 0.04
SEC13-202ENST00000350697 EHHADHQ08426 723 aa15.3■□□□□ 0.04
SEC13-202ENST00000350697 DPYDQ12882 1025 aa15.3■□□□□ 0.04
SEC13-202ENST00000350697 POSTNQ15063 836 aa15.3■□□□□ 0.04
SEC13-202ENST00000350697 ZC2HC1CQ53FD0 456 aaPredicted RBP15.3■□□□□ 0.04
SEC13-202ENST00000350697 FAM26FQ5R3K3 315 aa15.3■□□□□ 0.04
SEC13-202ENST00000350697 ZPBP2Q6X784 338 aa15.3■□□□□ 0.04
SEC13-202ENST00000350697 STXBP4Q6ZWJ1 553 aa15.3■□□□□ 0.04
SEC13-202ENST00000350697 APBB1IPQ7Z5R6 666 aaPredicted RBP15.3■□□□□ 0.04
SEC13-202ENST00000350697 MRPL10Q7Z7H8 261 aaKnown RBP15.3■□□□□ 0.04
SEC13-202ENST00000350697 MAP4K3Q8IVH8 894 aa15.3■□□□□ 0.04
SEC13-202ENST00000350697 RNF169Q8NCN4 708 aa15.3■□□□□ 0.04
SEC13-202ENST00000350697 PGBD4Q96DM1 585 aa15.3■□□□□ 0.04
SEC13-202ENST00000350697 BICD1Q96G01 975 aa15.3■□□□□ 0.04
SEC13-202ENST00000350697 YME1L1Q96TA2 773 aa15.3■□□□□ 0.04
SEC13-202ENST00000350697 TARS2Q9BW92 718 aaKnown RBP15.3■□□□□ 0.04
SEC13-202ENST00000350697 STRA6Q9BX79 667 aa15.3■□□□□ 0.04
SEC13-202ENST00000350697 HOOK1Q9UJC3 728 aaKnown RBP15.3■□□□□ 0.04
SEC13-202ENST00000350697 SOX1O00570 391 aaPredicted RBP15.29■□□□□ 0.04
SEC13-202ENST00000350697 TOM1L1O75674 476 aa15.29■□□□□ 0.04
SEC13-202ENST00000350697 NPTXRO95502 500 aa15.29■□□□□ 0.04
SEC13-202ENST00000350697 RPN1P04843 607 aaKnown RBP15.29■□□□□ 0.04
SEC13-202ENST00000350697 PRR29P0C7W0 189 aa15.29■□□□□ 0.04
SEC13-202ENST00000350697 DNAJB2P25686 324 aa15.29■□□□□ 0.04
SEC13-202ENST00000350697 PBX2P40425 430 aa15.29■□□□□ 0.04
SEC13-202ENST00000350697 DCAF4L1Q3SXM0 396 aa15.29■□□□□ 0.04
SEC13-202ENST00000350697 EEF1DP3Q658K8 133 aa15.29■□□□□ 0.04
SEC13-202ENST00000350697 ELOA2Q8IYF1 753 aaPredicted RBP15.29■□□□□ 0.04
SEC13-202ENST00000350697 HACE1Q8IYU2 909 aa15.29■□□□□ 0.04
SEC13-202ENST00000350697 SMG8Q8ND04 991 aaKnown RBP15.29■□□□□ 0.04
SEC13-202ENST00000350697 CCDC47Q96A33 483 aaKnown RBP15.29■□□□□ 0.04
SEC13-202ENST00000350697 ZNF689Q96CS4 500 aaPredicted RBP15.29■□□□□ 0.04
SEC13-202ENST00000350697 RC3H2Q9HBD1 1191 aaKnown RBP15.29■□□□□ 0.04
SEC13-202ENST00000350697 PTPRHQ9HD43 1115 aa15.29■□□□□ 0.04
SEC13-202ENST00000350697 LMBRD1Q9NUN5 540 aa15.29■□□□□ 0.04
SEC13-202ENST00000350697 EXOC1Q9NV70 894 aa15.29■□□□□ 0.04
SEC13-202ENST00000350697 YBX2Q9Y2T7 364 aaKnown RBP15.29■□□□□ 0.04
SEC13-202ENST00000350697 IPPQ9Y573 584 aa15.29■□□□□ 0.04
SEC13-202ENST00000350697 HNRNPDLO14979 420 aaKnown RBP15.28■□□□□ 0.04
SEC13-202ENST00000350697 PIGRP01833 764 aa15.28■□□□□ 0.04
SEC13-202ENST00000350697 MYBP10242 640 aa15.28■□□□□ 0.04
SEC13-202ENST00000350697 MYOGP15173 224 aa15.28■□□□□ 0.04
SEC13-202ENST00000350697 PROZP22891 400 aa15.28■□□□□ 0.04
SEC13-202ENST00000350697 LIG4P49917 911 aa15.28■□□□□ 0.04
SEC13-202ENST00000350697 CASP5P51878 434 aa15.28■□□□□ 0.04
SEC13-202ENST00000350697 PSMD2Q13200 908 aa15.28■□□□□ 0.04
SEC13-202ENST00000350697 KMT5BQ4FZB7 885 aa15.28■□□□□ 0.04
SEC13-202ENST00000350697 L1TD1Q5T7N2 865 aaKnown RBP15.28■□□□□ 0.04
SEC13-202ENST00000350697 MPZL3Q6UWV2 235 aa15.28■□□□□ 0.04
SEC13-202ENST00000350697 HPS3Q969F9 1004 aa15.28■□□□□ 0.04
SEC13-202ENST00000350697 ACCSQ96QU6 501 aa15.28■□□□□ 0.04
SEC13-202ENST00000350697 TCHPQ9BT92 498 aa15.28■□□□□ 0.04
SEC13-202ENST00000350697 FGFBP2Q9BYJ0 223 aa15.28■□□□□ 0.04
SEC13-202ENST00000350697 EXOC7Q9UPT5 735 aa15.28■□□□□ 0.04
SEC13-202ENST00000350697 ABLIM1O14639 778 aa15.27■□□□□ 0.04
SEC13-202ENST00000350697 EIF3DO15371 548 aaKnown RBP eCLIP15.27■□□□□ 0.04
SEC13-202ENST00000350697 CA3P07451 260 aa15.27■□□□□ 0.04
SEC13-202ENST00000350697 FGFR1P11362 822 aa15.27■□□□□ 0.04
SEC13-202ENST00000350697 ITGA4P13612 1032 aa15.27■□□□□ 0.04
SEC13-202ENST00000350697 PNOCQ13519 176 aa15.27■□□□□ 0.04
SEC13-202ENST00000350697 ZNF568Q3ZCX4 644 aa15.27■□□□□ 0.04
SEC13-202ENST00000350697 AGMOQ6ZNB7 445 aa15.27■□□□□ 0.04
SEC13-202ENST00000350697 CMTR2Q8IYT2 770 aaKnown RBP15.27■□□□□ 0.04
SEC13-202ENST00000350697 ABI1Q8IZP0 508 aa15.27■□□□□ 0.04
SEC13-202ENST00000350697 SP7Q8TDD2 431 aaPredicted RBP15.27■□□□□ 0.04
SEC13-202ENST00000350697 RSPH1Q8WYR4 309 aa15.27■□□□□ 0.04
SEC13-202ENST00000350697 LPPQ93052 612 aa15.27■□□□□ 0.04
SEC13-202ENST00000350697 TIFAQ96CG3 184 aa15.27■□□□□ 0.04
SEC13-202ENST00000350697 TMEM117Q9H0C3 514 aa15.27■□□□□ 0.04
SEC13-202ENST00000350697 CDT1Q9H211 546 aa15.27■□□□□ 0.04
SEC13-202ENST00000350697 NKX2-4Q9H2Z4 354 aa15.27■□□□□ 0.04
SEC13-202ENST00000350697 NXF3Q9H4D5 531 aaKnown RBP15.27■□□□□ 0.04
SEC13-202ENST00000350697 UBN1Q9NPG3 1134 aa15.27■□□□□ 0.04
SEC13-202ENST00000350697 RNF19AQ9NV58 838 aa15.27■□□□□ 0.04
SEC13-202ENST00000350697 ANKFY1Q9P2R3 1169 aa15.27■□□□□ 0.04
SEC13-202ENST00000350697 FNDC1Q4ZHG4 1894 aaPredicted RBP15.27■□□□□ 0.04
SEC13-202ENST00000350697 COL4A6Q14031 1691 aa15.27■□□□□ 0.03
SEC13-202ENST00000350697 LCHNA4D1U4 455 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms