RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 TRIM59Q8IWR1 403 aa15.17■□□□□ 0.02
PMS1-201ENST00000342075 MRFAP1L1Q96HT8 127 aa15.17■□□□□ 0.02
PMS1-201ENST00000342075 ACO2Q99798 780 aaKnown RBP15.17■□□□□ 0.02
PMS1-201ENST00000342075 FZD8Q9H461 694 aa15.17■□□□□ 0.02
PMS1-201ENST00000342075 TMEM134Q9H6X4 195 aa15.17■□□□□ 0.02
PMS1-201ENST00000342075 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.17■□□□□ 0.021e-16■■■■■ 250
PMS1-201ENST00000342075 TOPORSQ9NS56 1045 aaPredicted RBP15.17■□□□□ 0.02
PMS1-201ENST00000342075 RANBP2P49792 3224 aaKnown RBP15.17■□□□□ 0.02
PMS1-201ENST00000342075 PRPF4BQ13523 1007 aaKnown RBP15.17■□□□□ 0.02
PMS1-201ENST00000342075 SCARA3Q6AZY7 606 aa15.17■□□□□ 0.02
PMS1-201ENST00000342075 PPP1R9BQ96SB3 815 aa15.17■□□□□ 0.02
PMS1-201ENST00000342075 EXOC7Q9UPT5 735 aa15.17■□□□□ 0.02
PMS1-201ENST00000342075 ABLIM1O14639 778 aa15.16■□□□□ 0.02
PMS1-201ENST00000342075 ARF4P18085 180 aaPredicted RBP15.16■□□□□ 0.02
PMS1-201ENST00000342075 CCDC173Q0VFZ6 552 aa15.16■□□□□ 0.02
PMS1-201ENST00000342075 XXYLT1Q8NBI6 393 aa15.16■□□□□ 0.02
PMS1-201ENST00000342075 SLC17A8Q8NDX2 589 aa15.16■□□□□ 0.02
PMS1-201ENST00000342075 CCDC127Q96BQ5 260 aa15.16■□□□□ 0.02
PMS1-201ENST00000342075 TCHPQ9BT92 498 aa15.16■□□□□ 0.02
PMS1-201ENST00000342075 RNF19AQ9NV58 838 aa15.16■□□□□ 0.02
PMS1-201ENST00000342075 ARMCX3Q9UH62 379 aaPredicted RBP15.16■□□□□ 0.02
PMS1-201ENST00000342075 LGALS16A8MUM7 142 aa15.16■□□□□ 0.02
PMS1-201ENST00000342075 RNF225M0QZC1 329 aaPredicted RBP15.16■□□□□ 0.02
PMS1-201ENST00000342075 RPL13P26373 211 aaKnown RBP15.16■□□□□ 0.02
PMS1-201ENST00000342075 MNX1P50219 401 aaPredicted RBP15.16■□□□□ 0.02
PMS1-201ENST00000342075 EFNA5P52803 228 aa15.16■□□□□ 0.02
PMS1-201ENST00000342075 SNRNP35Q16560 246 aaKnown RBP15.16■□□□□ 0.02
PMS1-201ENST00000342075 FBXO46Q6PJ61 603 aaPredicted RBP15.16■□□□□ 0.02
PMS1-201ENST00000342075 SERINC5Q86VE9 423 aa15.16■□□□□ 0.02
PMS1-201ENST00000342075 HVCN1Q96D96 273 aa15.16■□□□□ 0.02
PMS1-201ENST00000342075 NDST4Q9H3R1 872 aa15.16■□□□□ 0.02
PMS1-201ENST00000342075 KBTBD13C9JR72 458 aa15.15■□□□□ 0.02
PMS1-201ENST00000342075 ASAP2O43150 1006 aa15.15■□□□□ 0.02
PMS1-201ENST00000342075 TSPAN1O60635 241 aa15.15■□□□□ 0.02
PMS1-201ENST00000342075 CHRNA1P02708 482 aa15.15■□□□□ 0.02
PMS1-201ENST00000342075 EPB41P11171 864 aaKnown RBP15.15■□□□□ 0.02
PMS1-201ENST00000342075 THPOP40225 353 aa15.15■□□□□ 0.02
PMS1-201ENST00000342075 CTCFP49711 727 aaPredicted RBP15.15■□□□□ 0.02
PMS1-201ENST00000342075 SPAG1Q07617 926 aa15.15■□□□□ 0.02
PMS1-201ENST00000342075 SNX17Q15036 470 aa15.15■□□□□ 0.02
PMS1-201ENST00000342075 VWA3BQ502W6 1294 aa15.15■□□□□ 0.02
PMS1-201ENST00000342075 ATF7IP2Q5U623 682 aa15.15■□□□□ 0.02
PMS1-201ENST00000342075 CRELD2Q6UXH1 353 aaPredicted RBP15.15■□□□□ 0.02
PMS1-201ENST00000342075 FAM114A1Q8IWE2 563 aa15.15■□□□□ 0.02
PMS1-201ENST00000342075 U2AF1L4Q8WU68 220 aaKnown RBP15.15■□□□□ 0.02
PMS1-201ENST00000342075 CPLX3Q8WVH0 158 aa15.15■□□□□ 0.02
PMS1-201ENST00000342075 SLC35C1Q96A29 364 aa15.15■□□□□ 0.02
PMS1-201ENST00000342075 MSTO1Q9BUK6 570 aa15.15■□□□□ 0.02
PMS1-201ENST00000342075 MRPL4Q9BYD3 311 aaKnown RBP15.15■□□□□ 0.02
PMS1-201ENST00000342075 SENP6Q9GZR1 1112 aaPredicted RBP15.15■□□□□ 0.02
PMS1-201ENST00000342075 FRMD4BQ9Y2L6 1034 aa15.15■□□□□ 0.02
PMS1-201ENST00000342075 CDY2AQ9Y6F7 541 aa15.15■□□□□ 0.02
PMS1-201ENST00000342075 LAMA3Q16787 3333 aa15.15■□□□□ 0.02
PMS1-201ENST00000342075 MOXD2PA6NHM9 499 aa15.15■□□□□ 0.02
PMS1-201ENST00000342075 ACKR2O00590 384 aa15.15■□□□□ 0.02
PMS1-201ENST00000342075 EPHB6O15197 1021 aa15.15■□□□□ 0.02
PMS1-201ENST00000342075 PSMC2P35998 433 aaKnown RBP15.15■□□□□ 0.02
PMS1-201ENST00000342075 VSTM4Q8IW00 320 aa15.15■□□□□ 0.02
PMS1-201ENST00000342075 THNSL1Q8IYQ7 743 aa15.15■□□□□ 0.02
PMS1-201ENST00000342075 CXCL16Q9H2A7 254 aa15.15■□□□□ 0.02
PMS1-201ENST00000342075 AGO2Q9UKV8 859 aaKnown RBP15.15■□□□□ 0.02
PMS1-201ENST00000342075 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.15■□□□□ 0.02
PMS1-201ENST00000342075 GNAT1P11488 350 aa15.14■□□□□ 0.01
PMS1-201ENST00000342075 PBX1P40424 430 aa15.14■□□□□ 0.01
PMS1-201ENST00000342075 KCNH2Q12809 1159 aa15.14■□□□□ 0.01
PMS1-201ENST00000342075 MAN2A1Q16706 1144 aa15.14■□□□□ 0.01
PMS1-201ENST00000342075 CBWD6Q4V339 395 aa15.14■□□□□ 0.01
PMS1-201ENST00000342075 CBWD3Q5JTY5 395 aa15.14■□□□□ 0.01
PMS1-201ENST00000342075 CBWD5Q5RIA9 395 aa15.14■□□□□ 0.01
PMS1-201ENST00000342075 C1orf220Q5T0J3 134 aa15.14■□□□□ 0.01
PMS1-201ENST00000342075 FOXR2Q6PJQ5 311 aa15.14■□□□□ 0.01
PMS1-201ENST00000342075 CCDC186Q7Z3E2 898 aa15.14■□□□□ 0.01
PMS1-201ENST00000342075 ARRDC4Q8NCT1 418 aa15.14■□□□□ 0.01
PMS1-201ENST00000342075 C2orf40Q9H1Z8 148 aa15.14■□□□□ 0.01
PMS1-201ENST00000342075 NOD1Q9Y239 953 aa15.14■□□□□ 0.01
PMS1-201ENST00000342075 TRIP11Q15643 1979 aa15.14■□□□□ 0.01
PMS1-201ENST00000342075 PTPRJQ12913 1337 aa15.14■□□□□ 0.01
PMS1-201ENST00000342075 A0A0B4J269 797 aa15.14■□□□□ 0.01
PMS1-201ENST00000342075 H0YCG3 227 aa15.14■□□□□ 0.01
PMS1-201ENST00000342075 CLDN3O15551 220 aa15.14■□□□□ 0.01
PMS1-201ENST00000342075 FAM189A1O60320 539 aa15.14■□□□□ 0.01
PMS1-201ENST00000342075 PIGRP01833 764 aa15.14■□□□□ 0.01
PMS1-201ENST00000342075 SYCP1Q15431 976 aa15.14■□□□□ 0.01
PMS1-201ENST00000342075 ZNF568Q3ZCX4 644 aa15.14■□□□□ 0.01
PMS1-201ENST00000342075 SLC9A9Q8IVB4 645 aa15.14■□□□□ 0.01
PMS1-201ENST00000342075 ANKRD20A12PQ8NF67 263 aa15.14■□□□□ 0.01
PMS1-201ENST00000342075 GOLGA5Q8TBA6 731 aa15.14■□□□□ 0.01
PMS1-201ENST00000342075 PDZD7Q9H5P4 517 aa15.14■□□□□ 0.01
PMS1-201ENST00000342075 OGDHLQ9ULD0 1010 aa15.14■□□□□ 0.01
PMS1-201ENST00000342075 PHF24Q9UPV7 400 aa15.14■□□□□ 0.01
PMS1-201ENST00000342075 HES2Q9Y543 173 aa15.14■□□□□ 0.01
PMS1-201ENST00000342075 FGFR1OPO95684 399 aaKnown RBP15.14■□□□□ 0.01
PMS1-201ENST00000342075 DLATP10515 647 aaKnown RBP15.14■□□□□ 0.01
PMS1-201ENST00000342075 DARSP14868 501 aaKnown RBP15.14■□□□□ 0.01
PMS1-201ENST00000342075 HOXA11P31270 313 aaPredicted RBP15.14■□□□□ 0.01
PMS1-201ENST00000342075 NFIL3Q16649 462 aa15.14■□□□□ 0.01
PMS1-201ENST00000342075 PTPRHQ9HD43 1115 aa15.14■□□□□ 0.01
PMS1-201ENST00000342075 NOC2LQ9Y3T9 749 aaKnown RBP15.14■□□□□ 0.01
PMS1-201ENST00000342075 DNM1LO00429 736 aa15.13■□□□□ 0.01
PMS1-201ENST00000342075 SLC16A3O15427 465 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms