RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 METTL14Q9HCE5 456 aaKnown RBP8.56□□□□□ -1.04
TMC1-202ENST00000340019 PTPRHQ9HD43 1115 aa8.56□□□□□ -1.04
TMC1-202ENST00000340019 INO80B-WBP1J3KQ70 363 aa8.55□□□□□ -1.04
TMC1-202ENST00000340019 N4BP3O15049 544 aa8.55□□□□□ -1.04
TMC1-202ENST00000340019 EXOC3O60645 756 aa8.55□□□□□ -1.04
TMC1-202ENST00000340019 TPM3P06753 285 aa8.55□□□□□ -1.04
TMC1-202ENST00000340019 EPB41P11171 864 aaKnown RBP8.55□□□□□ -1.04
TMC1-202ENST00000340019 TMEM62Q0P6H9 643 aa8.55□□□□□ -1.04
TMC1-202ENST00000340019 CCDC40Q4G0X9 1142 aa8.55□□□□□ -1.04
TMC1-202ENST00000340019 VWA3BQ502W6 1294 aa8.55□□□□□ -1.04
TMC1-202ENST00000340019 FAM47CQ5HY64 1035 aa8.55□□□□□ -1.04
TMC1-202ENST00000340019 VSTM4Q8IW00 320 aa8.55□□□□□ -1.04
TMC1-202ENST00000340019 POMGNT1Q8WZA1 660 aa8.55□□□□□ -1.04
TMC1-202ENST00000340019 WNT8BQ93098 351 aa8.55□□□□□ -1.04
TMC1-202ENST00000340019 ARMC5Q96C12 935 aa8.55□□□□□ -1.04
TMC1-202ENST00000340019 BICD1Q96G01 975 aa8.55□□□□□ -1.04
TMC1-202ENST00000340019 PRIMPOLQ96LW4 560 aa8.55□□□□□ -1.04
TMC1-202ENST00000340019 NOC4LQ9BVI4 516 aaKnown RBP8.55□□□□□ -1.04
TMC1-202ENST00000340019 INO80BQ9C086 356 aaPredicted RBP8.55□□□□□ -1.04
TMC1-202ENST00000340019 CRISPLD2Q9H0B8 497 aa8.55□□□□□ -1.04
TMC1-202ENST00000340019 RNF208Q9H0X6 261 aa8.55□□□□□ -1.04
TMC1-202ENST00000340019 CDHR5Q9HBB8 845 aa8.55□□□□□ -1.04
TMC1-202ENST00000340019 PRMT7Q9NVM4 692 aaPredicted RBP8.55□□□□□ -1.04
TMC1-202ENST00000340019 ARMCX3Q9UH62 379 aaPredicted RBP8.55□□□□□ -1.04
TMC1-202ENST00000340019 FRMD4BQ9Y2L6 1034 aa8.55□□□□□ -1.04
TMC1-202ENST00000340019 CNTNAP2Q9UHC6 1331 aa8.55□□□□□ -1.04
TMC1-202ENST00000340019 A0A0B4J269 797 aa8.55□□□□□ -1.04
TMC1-202ENST00000340019 B4GALT5O43286 388 aa8.55□□□□□ -1.04
TMC1-202ENST00000340019 TOM1L1O75674 476 aa8.55□□□□□ -1.04
TMC1-202ENST00000340019 PTGISQ16647 500 aa8.55□□□□□ -1.04
TMC1-202ENST00000340019 SLFN12LQ6IEE8 588 aa8.55□□□□□ -1.04
TMC1-202ENST00000340019 FAM186BQ8IYM0 893 aa8.55□□□□□ -1.04
TMC1-202ENST00000340019 ZBTB45Q96K62 511 aaPredicted RBP8.55□□□□□ -1.04
TMC1-202ENST00000340019 NDST4Q9H3R1 872 aa8.55□□□□□ -1.04
TMC1-202ENST00000340019 KBTBD13C9JR72 458 aa8.55□□□□□ -1.04
TMC1-202ENST00000340019 KIAA0391O15091 583 aaKnown RBP8.55□□□□□ -1.04
TMC1-202ENST00000340019 FAM189A1O60320 539 aa8.55□□□□□ -1.04
TMC1-202ENST00000340019 CSDE1O75534 798 aaKnown RBP8.55□□□□□ -1.04
TMC1-202ENST00000340019 MYCP01106 439 aaPredicted RBP8.55□□□□□ -1.04
TMC1-202ENST00000340019 RPLP2P05387 115 aaKnown RBP8.55□□□□□ -1.04
TMC1-202ENST00000340019 DARSP14868 501 aaKnown RBP8.55□□□□□ -1.04
TMC1-202ENST00000340019 PRPF4BQ13523 1007 aaKnown RBP8.55□□□□□ -1.04
TMC1-202ENST00000340019 PCBP1Q15365 356 aaKnown RBP eCLIP8.55□□□□□ -1.04
TMC1-202ENST00000340019 PTPN21Q16825 1174 aa8.55□□□□□ -1.04
TMC1-202ENST00000340019 GPD1LQ8N335 351 aa8.55□□□□□ -1.04
TMC1-202ENST00000340019 TMEM40Q8WWA1 233 aa8.55□□□□□ -1.04
TMC1-202ENST00000340019 SLC35C1Q96A29 364 aa8.55□□□□□ -1.04
TMC1-202ENST00000340019 GCOM2Q9BZD3 368 aaPredicted RBP8.55□□□□□ -1.04
TMC1-202ENST00000340019 STARD7Q9NQZ5 370 aa8.55□□□□□ -1.04
TMC1-202ENST00000340019 TNFSF13BQ9Y275 285 aa8.55□□□□□ -1.04
TMC1-202ENST00000340019 EXTL3O43909 919 aa8.54□□□□□ -1.04
TMC1-202ENST00000340019 TSPAN1O60635 241 aa8.54□□□□□ -1.04
TMC1-202ENST00000340019 ADRB2P07550 413 aa8.54□□□□□ -1.04
TMC1-202ENST00000340019 EIF4BP23588 611 aaKnown RBP8.54□□□□□ -1.04
TMC1-202ENST00000340019 MNX1P50219 401 aaPredicted RBP8.54□□□□□ -1.04
TMC1-202ENST00000340019 CRYBB1P53674 252 aaPredicted RBP8.54□□□□□ -1.04
TMC1-202ENST00000340019 UBXN1Q04323 297 aa8.54□□□□□ -1.04
TMC1-202ENST00000340019 MCL1Q07820 350 aa8.54□□□□□ -1.04
TMC1-202ENST00000340019 SNRNP35Q16560 246 aaKnown RBP8.54□□□□□ -1.04
TMC1-202ENST00000340019 ATF7IP2Q5U623 682 aa8.54□□□□□ -1.04
TMC1-202ENST00000340019 CRELD2Q6UXH1 353 aaPredicted RBP8.54□□□□□ -1.04
TMC1-202ENST00000340019 INTS8Q75QN2 995 aaKnown RBP8.54□□□□□ -1.04
TMC1-202ENST00000340019 CBWD2Q8IUF1 395 aa8.54□□□□□ -1.04
TMC1-202ENST00000340019 SAAL1Q96ER3 474 aa8.54□□□□□ -1.04
TMC1-202ENST00000340019 OSMRQ99650 979 aa8.54□□□□□ -1.04
TMC1-202ENST00000340019 TRMT13Q9NUP7 481 aaKnown RBP8.54□□□□□ -1.04
TMC1-202ENST00000340019 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.54□□□□□ -1.04
TMC1-202ENST00000340019 ITIH6Q6UXX5 1313 aa8.54□□□□□ -1.04
TMC1-202ENST00000340019 A0A0U1RQG5 324 aaPredicted RBP8.54□□□□□ -1.04
TMC1-202ENST00000340019 A0A1W2PQC6 194 aa8.54□□□□□ -1.04
TMC1-202ENST00000340019 GOLGA8IPA6NC78 632 aa8.54□□□□□ -1.04
TMC1-202ENST00000340019 GOLGA8JA6NMD2 632 aa8.54□□□□□ -1.04
TMC1-202ENST00000340019 CLDN3O15551 220 aa8.54□□□□□ -1.04
TMC1-202ENST00000340019 TPM2P07951 284 aa8.54□□□□□ -1.04
TMC1-202ENST00000340019 CDK7P50613 346 aa8.54□□□□□ -1.04
TMC1-202ENST00000340019 MRPS6P82932 125 aaKnown RBP8.54□□□□□ -1.04
TMC1-202ENST00000340019 PPP2R3AQ06190 1150 aa8.54□□□□□ -1.04
TMC1-202ENST00000340019 ENPEPQ07075 957 aa8.54□□□□□ -1.04
TMC1-202ENST00000340019 MGAT3Q09327 533 aa8.54□□□□□ -1.04
TMC1-202ENST00000340019 BFSP1Q12934 665 aa8.54□□□□□ -1.04
TMC1-202ENST00000340019 PTK7Q13308 1070 aa8.54□□□□□ -1.04
TMC1-202ENST00000340019 SNX17Q15036 470 aa8.54□□□□□ -1.04
TMC1-202ENST00000340019 RDH13Q8NBN7 331 aa8.54□□□□□ -1.04
TMC1-202ENST00000340019 SPC24Q8NBT2 197 aa8.54□□□□□ -1.04
TMC1-202ENST00000340019 VTI1AQ96AJ9 217 aa8.54□□□□□ -1.04
TMC1-202ENST00000340019 MFSD14AQ96MC6 490 aa8.54□□□□□ -1.04
TMC1-202ENST00000340019 SCLT1Q96NL6 688 aa8.54□□□□□ -1.04
TMC1-202ENST00000340019 KIAA1586Q9HCI6 787 aa8.54□□□□□ -1.04
TMC1-202ENST00000340019 ANKFY1Q9P2R3 1169 aa8.54□□□□□ -1.04
TMC1-202ENST00000340019 AGO2Q9UKV8 859 aaKnown RBP8.54□□□□□ -1.04
TMC1-202ENST00000340019 A0A1B0GUA9 196 aa8.53□□□□□ -1.04
TMC1-202ENST00000340019 ARVCFO00192 962 aa8.53□□□□□ -1.04
TMC1-202ENST00000340019 SGPL1O95470 568 aa8.53□□□□□ -1.04
TMC1-202ENST00000340019 ARF4P18085 180 aaPredicted RBP8.53□□□□□ -1.04
TMC1-202ENST00000340019 KCNH2Q12809 1159 aa8.53□□□□□ -1.04
TMC1-202ENST00000340019 TRIM71Q2Q1W2 868 aaKnown RBP8.53□□□□□ -1.04
TMC1-202ENST00000340019 SPECC1LQ69YQ0 1117 aa8.53□□□□□ -1.04
TMC1-202ENST00000340019 MPZL3Q6UWV2 235 aa8.53□□□□□ -1.04
TMC1-202ENST00000340019 PLEKHO2Q8TD55 490 aa8.53□□□□□ -1.04
TMC1-202ENST00000340019 DHX38Q92620 1227 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms