RNA–Protein interactions for RNA: ENST00000334418.5

CCDC84-201, Transcript of coiled-coil domain containing 84, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC84, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-201ENST00000334418 ACCSQ96QU6 501 aa17.8■□□□□ 0.44
CCDC84-201ENST00000334418 CLSTN2Q9H4D0 955 aa17.8■□□□□ 0.44
CCDC84-201ENST00000334418 CUL9Q8IWT3 2517 aa17.79■□□□□ 0.44
CCDC84-201ENST00000334418 COL6A3P12111 3177 aa17.79■□□□□ 0.44
CCDC84-201ENST00000334418 MGEA5O60502 916 aa17.79■□□□□ 0.44
CCDC84-201ENST00000334418 PPP1R37O75864 691 aa17.79■□□□□ 0.44
CCDC84-201ENST00000334418 RHOBTB3O94955 611 aa17.79■□□□□ 0.44
CCDC84-201ENST00000334418 STAG3L1P0CL83 205 aa17.79■□□□□ 0.44
CCDC84-201ENST00000334418 MYBP10242 640 aa17.79■□□□□ 0.44
CCDC84-201ENST00000334418 SARSP49591 514 aaKnown RBP17.79■□□□□ 0.44
CCDC84-201ENST00000334418 DCAF4L1Q3SXM0 396 aa17.79■□□□□ 0.44
CCDC84-201ENST00000334418 ZC2HC1CQ53FD0 456 aaPredicted RBP17.79■□□□□ 0.44
CCDC84-201ENST00000334418 SLC27A1Q6PCB7 646 aa17.79■□□□□ 0.44
CCDC84-201ENST00000334418 ZPBP2Q6X784 338 aa17.79■□□□□ 0.44
CCDC84-201ENST00000334418 SYCP3Q8IZU3 236 aa17.79■□□□□ 0.44
CCDC84-201ENST00000334418 GPT2Q8TD30 523 aa17.79■□□□□ 0.44
CCDC84-201ENST00000334418 TARS2Q9BW92 718 aaKnown RBP17.79■□□□□ 0.44
CCDC84-201ENST00000334418 TRAIPQ9BWF2 469 aa17.79■□□□□ 0.44
CCDC84-201ENST00000334418 TMEM206Q9H813 350 aa17.79■□□□□ 0.44
CCDC84-201ENST00000334418 SLC39A2Q9NP94 309 aa17.79■□□□□ 0.44
CCDC84-201ENST00000334418 LRFN2Q9ULH4 789 aa17.79■□□□□ 0.44
CCDC84-201ENST00000334418 TNFSF13BQ9Y275 285 aa17.79■□□□□ 0.44
CCDC84-201ENST00000334418 TTC3P53804 2025 aa17.78■□□□□ 0.44
CCDC84-201ENST00000334418 A0A1B0GUA9 196 aa17.78■□□□□ 0.44
CCDC84-201ENST00000334418 ENPP3O14638 875 aa17.78■□□□□ 0.44
CCDC84-201ENST00000334418 PIGRP01833 764 aa17.78■□□□□ 0.44
CCDC84-201ENST00000334418 IBSPP21815 317 aaPredicted RBP17.78■□□□□ 0.44
CCDC84-201ENST00000334418 HOXA11P31270 313 aaPredicted RBP17.78■□□□□ 0.44
CCDC84-201ENST00000334418 MATR3P43243 847 aaKnown RBP eCLIP17.78■□□□□ 0.44
CCDC84-201ENST00000334418 CASP5P51878 434 aa17.78■□□□□ 0.44
CCDC84-201ENST00000334418 CAMK4Q16566 473 aa17.78■□□□□ 0.44
CCDC84-201ENST00000334418 ZNF568Q3ZCX4 644 aa17.78■□□□□ 0.44
CCDC84-201ENST00000334418 NT5DC1Q5TFE4 455 aa17.78■□□□□ 0.44
CCDC84-201ENST00000334418 NPAS4Q8IUM7 802 aa17.78■□□□□ 0.44
CCDC84-201ENST00000334418 PHOSPHO2Q8TCD6 241 aa17.78■□□□□ 0.44
CCDC84-201ENST00000334418 HPS3Q969F9 1004 aa17.78■□□□□ 0.44
CCDC84-201ENST00000334418 FAM161BQ96MY7 647 aa17.78■□□□□ 0.44
CCDC84-201ENST00000334418 ACO2Q99798 780 aaKnown RBP17.78■□□□□ 0.44
CCDC84-201ENST00000334418 TCHPQ9BT92 498 aa17.78■□□□□ 0.44
CCDC84-201ENST00000334418 PDZD7Q9H5P4 517 aa17.78■□□□□ 0.44
CCDC84-201ENST00000334418 FAM105AQ9NUU6 356 aa17.78■□□□□ 0.44
CCDC84-201ENST00000334418 CXXC1Q9P0U4 656 aaPredicted RBP17.78■□□□□ 0.44
CCDC84-201ENST00000334418 PCDHA5Q9Y5H7 936 aa17.78■□□□□ 0.44
CCDC84-201ENST00000334418 A0A0U1RQF3 1178 aa17.77■□□□□ 0.44
CCDC84-201ENST00000334418 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.77■□□□□ 0.44
CCDC84-201ENST00000334418 C9IYK1 514 aa17.77■□□□□ 0.44
CCDC84-201ENST00000334418 TOM1L1O75674 476 aa17.77■□□□□ 0.44
CCDC84-201ENST00000334418 EDN1P05305 212 aa17.77■□□□□ 0.44
CCDC84-201ENST00000334418 ATP2A2P16615 1042 aaKnown RBP17.77■□□□□ 0.44
CCDC84-201ENST00000334418 DEFB103AP81534 67 aa17.77■□□□□ 0.44
CCDC84-201ENST00000334418 RASIP1Q5U651 963 aa17.77■□□□□ 0.44
CCDC84-201ENST00000334418 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.77■□□□□ 0.44
CCDC84-201ENST00000334418 SYAP1Q96A49 352 aaPredicted RBP17.77■□□□□ 0.44
CCDC84-201ENST00000334418 PGBD4Q96DM1 585 aa17.77■□□□□ 0.44
CCDC84-201ENST00000334418 STRA6Q9BX79 667 aa17.77■□□□□ 0.44
CCDC84-201ENST00000334418 FGFBP2Q9BYJ0 223 aa17.77■□□□□ 0.44
CCDC84-201ENST00000334418 ELAC1Q9H777 363 aaKnown RBP17.77■□□□□ 0.44
CCDC84-201ENST00000334418 ANKFY1Q9P2R3 1169 aa17.77■□□□□ 0.44
CCDC84-201ENST00000334418 PCDHB7Q9Y5E2 793 aa17.77■□□□□ 0.44
CCDC84-201ENST00000334418 HOXA2O43364 376 aa17.76■□□□□ 0.43
CCDC84-201ENST00000334418 PRPF6O94906 941 aaKnown RBP17.76■□□□□ 0.43
CCDC84-201ENST00000334418 NPTXRO95502 500 aa17.76■□□□□ 0.43
CCDC84-201ENST00000334418 STK4Q13043 487 aa17.76■□□□□ 0.43
CCDC84-201ENST00000334418 NOLC1Q14978 699 aaKnown RBP eCLIP17.76■□□□□ 0.43
CCDC84-201ENST00000334418 SLFN12LQ6IEE8 588 aa17.76■□□□□ 0.43
CCDC84-201ENST00000334418 MPZL3Q6UWV2 235 aa17.76■□□□□ 0.43
CCDC84-201ENST00000334418 EPM2AIP1Q7L775 607 aaPredicted RBP17.76■□□□□ 0.43
CCDC84-201ENST00000334418 RTN4RL1Q86UN2 441 aaPredicted RBP17.76■□□□□ 0.43
CCDC84-201ENST00000334418 ECHDC2Q86YB7 292 aa17.76■□□□□ 0.43
CCDC84-201ENST00000334418 RNF169Q8NCN4 708 aa17.76■□□□□ 0.43
CCDC84-201ENST00000334418 KIAA0895Q8NCT3 520 aa17.76■□□□□ 0.43
CCDC84-201ENST00000334418 SPATA20Q8TB22 786 aa17.76■□□□□ 0.43
CCDC84-201ENST00000334418 ERCC4Q92889 916 aaPredicted RBP17.76■□□□□ 0.43
CCDC84-201ENST00000334418 TMEM161AQ9NX61 479 aa17.76■□□□□ 0.43
CCDC84-201ENST00000334418 MTMR10Q9NXD2 777 aa17.76■□□□□ 0.43
CCDC84-201ENST00000334418 PCDHB2Q9Y5E7 798 aa17.76■□□□□ 0.43
CCDC84-201ENST00000334418 PTPRSQ13332 1948 aa17.76■□□□□ 0.43
CCDC84-201ENST00000334418 TTLL13PA6NNM8 815 aa17.75■□□□□ 0.43
CCDC84-201ENST00000334418 CLDN3O15551 220 aa17.75■□□□□ 0.43
CCDC84-201ENST00000334418 EOMESO95936 686 aa17.75■□□□□ 0.43
CCDC84-201ENST00000334418 MCF2P10911 925 aa17.75■□□□□ 0.43
CCDC84-201ENST00000334418 SMAD3P84022 425 aaKnown RBP17.75■□□□□ 0.43
CCDC84-201ENST00000334418 BMT2Q1RMZ1 405 aa17.75■□□□□ 0.43
CCDC84-201ENST00000334418 ZNF697Q5TEC3 545 aa17.75■□□□□ 0.43
CCDC84-201ENST00000334418 ZNF658Q5TYW1 1059 aaPredicted RBP17.75■□□□□ 0.43
CCDC84-201ENST00000334418 HS2ST1Q7LGA3 356 aa17.75■□□□□ 0.43
CCDC84-201ENST00000334418 CDR2LQ86X02 465 aaPredicted RBP17.75■□□□□ 0.43
CCDC84-201ENST00000334418 TRIML1Q8N9V2 468 aa17.75■□□□□ 0.43
CCDC84-201ENST00000334418 ZNF507Q8TCN5 953 aa17.75■□□□□ 0.43
CCDC84-201ENST00000334418 SCFD1Q8WVM8 642 aa17.75■□□□□ 0.43
CCDC84-201ENST00000334418 ZBED2Q9BTP6 218 aa17.75■□□□□ 0.43
CCDC84-201ENST00000334418 EIF2AQ9BY44 585 aaKnown RBP17.75■□□□□ 0.43
CCDC84-201ENST00000334418 GBP3Q9H0R5 595 aa17.75■□□□□ 0.43
CCDC84-201ENST00000334418 KIAA1468Q9P260 1216 aa17.75■□□□□ 0.43
CCDC84-201ENST00000334418 USP20Q9Y2K6 914 aa17.75■□□□□ 0.43
CCDC84-201ENST00000334418 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.74■□□□□ 0.43
CCDC84-201ENST00000334418 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.74■□□□□ 0.43
CCDC84-201ENST00000334418 ZNF623O75123 536 aa17.74■□□□□ 0.43
CCDC84-201ENST00000334418 UPP2O95045 317 aa17.74■□□□□ 0.43
CCDC84-201ENST00000334418 HARSP12081 509 aaKnown RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms