RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 TMEM161BQ8NDZ6 487 aa9.75□□□□□ -0.85
COPB2-201ENST00000333188 PLEKHO2Q8TD55 490 aa9.75□□□□□ -0.85
COPB2-201ENST00000333188 AFG1LQ8WV93 481 aa9.75□□□□□ -0.85
COPB2-201ENST00000333188 SEPT1Q8WYJ6 367 aa9.75□□□□□ -0.85
COPB2-201ENST00000333188 SEMA4DQ92854 862 aa9.75□□□□□ -0.85
COPB2-201ENST00000333188 NT5C1BQ96P26 610 aa9.75□□□□□ -0.85
COPB2-201ENST00000333188 XPNPEP1Q9NQW7 623 aa9.75□□□□□ -0.85
COPB2-201ENST00000333188 KLHL11Q9NVR0 708 aa9.75□□□□□ -0.85
COPB2-201ENST00000333188 RBPJLQ9UBG7 517 aa9.75□□□□□ -0.85
COPB2-201ENST00000333188 JRKLQ9Y4A0 524 aa9.75□□□□□ -0.85
COPB2-201ENST00000333188 PCDHB4Q9Y5E5 795 aa9.75□□□□□ -0.85
COPB2-201ENST00000333188 MAST2Q6P0Q8 1798 aa9.75□□□□□ -0.85
COPB2-201ENST00000333188 B4GALT5O43286 388 aa9.75□□□□□ -0.85
COPB2-201ENST00000333188 TRPC3Q13507 836 aa9.75□□□□□ -0.85
COPB2-201ENST00000333188 DDX42Q86XP3 938 aaKnown RBP eCLIP9.75□□□□□ -0.855e-6■■□□□ 11.5
COPB2-201ENST00000333188 CPNE8Q86YQ8 564 aa9.75□□□□□ -0.85
COPB2-201ENST00000333188 GPRASP2Q96D09 838 aa9.75□□□□□ -0.85
COPB2-201ENST00000333188 RUFY1Q96T51 708 aa9.75□□□□□ -0.85
COPB2-201ENST00000333188 C1orf112Q9NSG2 853 aa9.75□□□□□ -0.85
COPB2-201ENST00000333188 RBM12Q9NTZ6 932 aaKnown RBP9.75□□□□□ -0.85
COPB2-201ENST00000333188 SEL1LQ9UBV2 794 aa9.75□□□□□ -0.85
COPB2-201ENST00000333188 DMGDHQ9UI17 866 aaKnown RBP9.75□□□□□ -0.85
COPB2-201ENST00000333188 DDX3XO00571 662 aaKnown RBP eCLIP9.75□□□□□ -0.852e-11■■□□□ 12.7
COPB2-201ENST00000333188 MMEP08473 750 aa9.75□□□□□ -0.85
COPB2-201ENST00000333188 SNX1Q13596 522 aa9.75□□□□□ -0.85
COPB2-201ENST00000333188 TRADDQ15628 312 aa9.75□□□□□ -0.85
COPB2-201ENST00000333188 EPM2AIP1Q7L775 607 aaPredicted RBP9.75□□□□□ -0.85
COPB2-201ENST00000333188 MCPH1Q8NEM0 835 aa9.75□□□□□ -0.85
COPB2-201ENST00000333188 SPIRE2Q8WWL2 714 aa9.75□□□□□ -0.85
COPB2-201ENST00000333188 RABGGTAQ92696 567 aa9.75□□□□□ -0.85
COPB2-201ENST00000333188 ZNF653Q96CK0 615 aa9.75□□□□□ -0.85
COPB2-201ENST00000333188 CPB2Q96IY4 423 aa9.75□□□□□ -0.85
COPB2-201ENST00000333188 IMPG2Q9BZV3 1241 aa9.75□□□□□ -0.85
COPB2-201ENST00000333188 GANQ9H2C0 597 aa9.75□□□□□ -0.85
COPB2-201ENST00000333188 EPB41L5Q9HCM4 733 aa9.75□□□□□ -0.85
COPB2-201ENST00000333188 NMRK2Q9NPI5 230 aa9.75□□□□□ -0.85
COPB2-201ENST00000333188 DNAJC17Q9NVM6 304 aaKnown RBP9.75□□□□□ -0.85
COPB2-201ENST00000333188 ZNF831Q5JPB2 1677 aa9.75□□□□□ -0.85
COPB2-201ENST00000333188 ZMYM2Q9UBW7 1377 aa9.75□□□□□ -0.85
COPB2-201ENST00000333188 FRMD3A2A2Y4 597 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 F8VZ95 297 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 ADORA2AP29274 412 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 SNAPC2Q13487 334 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 WHAMMP3Q1A5X7 153 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 KCTD16Q68DU8 428 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 EFCAB12Q6NXP0 572 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 CC2D1AQ6P1N0 951 aaPredicted RBP9.74□□□□□ -0.85
COPB2-201ENST00000333188 CCDC25Q86WR0 208 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 GOLGA5Q8TBA6 731 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 SLC35G2Q8TBE7 412 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 ARHGEF26Q96DR7 871 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 FIZ1Q96SL8 496 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 TAF1DQ9H5J8 278 aaPredicted RBP9.74□□□□□ -0.85
COPB2-201ENST00000333188 SUCLA2Q9P2R7 463 aaPredicted RBP9.74□□□□□ -0.85
COPB2-201ENST00000333188 DDX41Q9UJV9 622 aaKnown RBP9.74□□□□□ -0.85
COPB2-201ENST00000333188 KRIT1O00522 736 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 ZBTB22O15209 634 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 TUBB4AP04350 444 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 OAS2P29728 719 aaKnown RBP9.74□□□□□ -0.85
COPB2-201ENST00000333188 LMAN1P49257 510 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 ZNF157P51786 506 aaPredicted RBP9.74□□□□□ -0.85
COPB2-201ENST00000333188 ERVK-9P63128 1117 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 CKAP4Q07065 602 aaKnown RBP9.74□□□□□ -0.85
COPB2-201ENST00000333188 MTM1Q13496 603 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 SMC1AQ14683 1233 aaKnown RBP9.74□□□□□ -0.85
COPB2-201ENST00000333188 TRIP13Q15645 432 aaPredicted RBP9.74□□□□□ -0.85
COPB2-201ENST00000333188 IRF2BP2Q7Z5L9 587 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 KIFAP3Q92845 792 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 ACSF2Q96CM8 615 aaPredicted RBP9.74□□□□□ -0.85
COPB2-201ENST00000333188 C11orf70Q9BRQ4 267 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 HEMGNQ9BXL5 484 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 RNPEPQ9H4A4 650 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 SYNCQ9H7C4 482 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 ABT1Q9ULW3 272 aaKnown RBP9.74□□□□□ -0.85
COPB2-201ENST00000333188 SNX12Q9UMY4 172 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 GOLGA8SH3BPF8 625 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 EIF3DO15371 548 aaKnown RBP eCLIP9.74□□□□□ -0.85
COPB2-201ENST00000333188 FERP16591 822 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 GLRA2P23416 452 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 CYP2C19P33261 490 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 NEDD9Q14511 834 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 KIZQ2M2Z5 673 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 ZNF568Q3ZCX4 644 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 CFAP221Q4G0U5 840 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 GLRA4Q5JXX5 417 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 FAM160B1Q5W0V3 765 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 KAZNQ674X7 775 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 KRT39Q6A163 491 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 SPATA4Q8NEY3 305 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 NEK9Q8TD19 979 aa9.74□□□□□ -0.85
COPB2-201ENST00000333188 MPHOSPH6Q99547 160 aaKnown RBP9.74□□□□□ -0.85
COPB2-201ENST00000333188 A0A1W2PQJ5 194 aa9.73□□□□□ -0.85
COPB2-201ENST00000333188 LRRIQ3A6PVS8 624 aaPredicted RBP9.73□□□□□ -0.85
COPB2-201ENST00000333188 PLA2G6O60733 806 aa9.73□□□□□ -0.85
COPB2-201ENST00000333188 DKC1O60832 514 aaKnown RBP eCLIP9.73□□□□□ -0.85
COPB2-201ENST00000333188 SASH3O75995 380 aa9.73□□□□□ -0.85
COPB2-201ENST00000333188 TMEM191BP0C7N4 346 aa9.73□□□□□ -0.85
COPB2-201ENST00000333188 ATP4AP20648 1035 aa9.73□□□□□ -0.85
COPB2-201ENST00000333188 PDE6CP51160 858 aa9.73□□□□□ -0.85
COPB2-201ENST00000333188 GPD1LQ8N335 351 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms