RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 DENND3A2RUS2 1198 aa15.73■□□□□ 0.11
TPM3-206ENST00000330188 RGS20O76081 388 aa15.73■□□□□ 0.11
TPM3-206ENST00000330188 ZBTB7AO95365 584 aa15.73■□□□□ 0.11
TPM3-206ENST00000330188 SGPL1O95470 568 aa15.73■□□□□ 0.11
TPM3-206ENST00000330188 FTLP02792 175 aaPredicted RBP15.73■□□□□ 0.11
TPM3-206ENST00000330188 CNGA1P29973 690 aa15.73■□□□□ 0.11
TPM3-206ENST00000330188 DSG3P32926 999 aa15.73■□□□□ 0.11
TPM3-206ENST00000330188 HSPA9P38646 679 aaKnown RBP15.73■□□□□ 0.11
TPM3-206ENST00000330188 TCEAL1Q15170 157 aa15.73■□□□□ 0.11
TPM3-206ENST00000330188 FAM71AQ8IYT1 594 aa15.73■□□□□ 0.11
TPM3-206ENST00000330188 PARD3BQ8TEW8 1205 aa15.73■□□□□ 0.11
TPM3-206ENST00000330188 SPIRE2Q8WWL2 714 aa15.73■□□□□ 0.11
TPM3-206ENST00000330188 CEP170P1Q96L14 293 aa15.73■□□□□ 0.11
TPM3-206ENST00000330188 WRNIP1Q96S55 665 aa15.73■□□□□ 0.11
TPM3-206ENST00000330188 NTPCRQ9BSD7 190 aaKnown RBP15.73■□□□□ 0.11
TPM3-206ENST00000330188 CWC15Q9P013 229 aaKnown RBP15.73■□□□□ 0.11
TPM3-206ENST00000330188 ZNF214Q9UL59 606 aaPredicted RBP15.73■□□□□ 0.11
TPM3-206ENST00000330188 ADAMTS5Q9UNA0 930 aa15.73■□□□□ 0.11
TPM3-206ENST00000330188 GJA3Q9Y6H8 435 aa15.73■□□□□ 0.11
TPM3-206ENST00000330188 ZNF233A6NK53 670 aa15.73■□□□□ 0.11
TPM3-206ENST00000330188 MAFGO15525 162 aa15.73■□□□□ 0.11
TPM3-206ENST00000330188 FGGP02679 453 aa15.73■□□□□ 0.11
TPM3-206ENST00000330188 IVLP07476 585 aa15.73■□□□□ 0.11
TPM3-206ENST00000330188 CHRNB2P17787 502 aa15.73■□□□□ 0.11
TPM3-206ENST00000330188 OAZ1P54368 228 aa15.73■□□□□ 0.11
TPM3-206ENST00000330188 SOX10P56693 466 aa15.73■□□□□ 0.11
TPM3-206ENST00000330188 SLC39A4Q6P5W5 647 aa15.73■□□□□ 0.11
TPM3-206ENST00000330188 OTUD6AQ7L8S5 288 aa15.73■□□□□ 0.11
TPM3-206ENST00000330188 NOP9Q86U38 636 aaKnown RBP15.73■□□□□ 0.11
TPM3-206ENST00000330188 CD302Q8IX05 232 aa15.73■□□□□ 0.11
TPM3-206ENST00000330188 EPS8L1Q8TE68 723 aa15.73■□□□□ 0.11
TPM3-206ENST00000330188 KIFAP3Q92845 792 aa15.73■□□□□ 0.11
TPM3-206ENST00000330188 C12orf42Q96LP6 360 aa15.73■□□□□ 0.11
TPM3-206ENST00000330188 PCDHB18PQ96TA0 734 aa15.73■□□□□ 0.11
TPM3-206ENST00000330188 CARD9Q9H257 536 aa15.73■□□□□ 0.11
TPM3-206ENST00000330188 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.73■□□□□ 0.118e-7■■■■■ 194.6
TPM3-206ENST00000330188 PICK1Q9NRD5 415 aa15.73■□□□□ 0.11
TPM3-206ENST00000330188 AMACRQ9UHK6 382 aa15.73■□□□□ 0.11
TPM3-206ENST00000330188 NOCTQ9UK39 431 aaKnown RBP15.73■□□□□ 0.11
TPM3-206ENST00000330188 COQ4Q9Y3A0 265 aa15.73■□□□□ 0.11
TPM3-206ENST00000330188 TELO2Q9Y4R8 837 aa15.73■□□□□ 0.11
TPM3-206ENST00000330188 ZNFX1Q9P2E3 1918 aaKnown RBP15.72■□□□□ 0.11
TPM3-206ENST00000330188 RTN2O75298 545 aa15.72■□□□□ 0.11
TPM3-206ENST00000330188 KRT14P02533 472 aa15.72■□□□□ 0.11
TPM3-206ENST00000330188 USP8P40818 1118 aa15.72■□□□□ 0.11
TPM3-206ENST00000330188 HMGCS2P54868 508 aa15.72■□□□□ 0.11
TPM3-206ENST00000330188 POU5F1Q01860 360 aaKnown RBP15.72■□□□□ 0.11
TPM3-206ENST00000330188 HLTFQ14527 1009 aaKnown RBP eCLIP15.72■□□□□ 0.11
TPM3-206ENST00000330188 KRT39Q6A163 491 aa15.72■□□□□ 0.11
TPM3-206ENST00000330188 DDX42Q86XP3 938 aaKnown RBP eCLIP15.72■□□□□ 0.11
TPM3-206ENST00000330188 PPM1KQ8N3J5 372 aa15.72■□□□□ 0.11
TPM3-206ENST00000330188 NSUN6Q8TEA1 469 aaKnown RBP15.72■□□□□ 0.11
TPM3-206ENST00000330188 SHC3Q92529 594 aa15.72■□□□□ 0.11
TPM3-206ENST00000330188 ATP6V0A1Q93050 837 aa15.72■□□□□ 0.11
TPM3-206ENST00000330188 FBXL18Q96ME1 805 aa15.72■□□□□ 0.11
TPM3-206ENST00000330188 C17orf75Q9HAS0 396 aa15.72■□□□□ 0.11
TPM3-206ENST00000330188 TMEM8AQ9HCN3 771 aa15.72■□□□□ 0.11
TPM3-206ENST00000330188 FZD1Q9UP38 647 aa15.72■□□□□ 0.11
TPM3-206ENST00000330188 LCTP09848 1927 aa15.72■□□□□ 0.11
TPM3-206ENST00000330188 ADGRA3Q8IWK6 1321 aa15.72■□□□□ 0.11
TPM3-206ENST00000330188 GPC5P78333 572 aa15.71■□□□□ 0.11
TPM3-206ENST00000330188 TMEM132BQ14DG7 1078 aa15.71■□□□□ 0.11
TPM3-206ENST00000330188 PRAMEF18Q5VWM3 479 aa15.71■□□□□ 0.11
TPM3-206ENST00000330188 C11orf63Q6NUN7 778 aa15.71■□□□□ 0.11
TPM3-206ENST00000330188 FOXR1Q6PIV2 292 aa15.71■□□□□ 0.11
TPM3-206ENST00000330188 MAATS1Q7Z4T9 603 aa15.71■□□□□ 0.11
TPM3-206ENST00000330188 CCDC26Q8TAB7 109 aa15.71■□□□□ 0.11
TPM3-206ENST00000330188 TMC2Q8TDI7 906 aa15.71■□□□□ 0.11
TPM3-206ENST00000330188 CCDC127Q96BQ5 260 aa15.71■□□□□ 0.11
TPM3-206ENST00000330188 RNPC3Q96LT9 517 aaKnown RBP15.71■□□□□ 0.11
TPM3-206ENST00000330188 MFSD14AQ96MC6 490 aa15.71■□□□□ 0.11
TPM3-206ENST00000330188 POP1Q99575 1024 aaKnown RBP15.71■□□□□ 0.11
TPM3-206ENST00000330188 NEUROG2Q9H2A3 272 aa15.71■□□□□ 0.11
TPM3-206ENST00000330188 PDLIM7Q9NR12 457 aa15.71■□□□□ 0.11
TPM3-206ENST00000330188 TOPORSQ9NS56 1045 aaPredicted RBP15.71■□□□□ 0.11
TPM3-206ENST00000330188 NR2E1Q9Y466 385 aa15.71■□□□□ 0.11
TPM3-206ENST00000330188 NFASCO94856 1347 aa15.71■□□□□ 0.11
TPM3-206ENST00000330188 LOC285556D6RIA3 1793 aa15.71■□□□□ 0.11
TPM3-206ENST00000330188 FZD9O00144 591 aa15.71■□□□□ 0.11
TPM3-206ENST00000330188 TTI1O43156 1089 aa15.71■□□□□ 0.11
TPM3-206ENST00000330188 GPC3P51654 580 aa15.71■□□□□ 0.11
TPM3-206ENST00000330188 MFAP3P55082 362 aa15.71■□□□□ 0.11
TPM3-206ENST00000330188 HELQQ8TDG4 1101 aa15.71■□□□□ 0.11
TPM3-206ENST00000330188 SEC14L1Q92503 715 aa15.71■□□□□ 0.11
TPM3-206ENST00000330188 XPNPEP1Q9NQW7 623 aa15.71■□□□□ 0.11
TPM3-206ENST00000330188 CTTNBP2NLQ9P2B4 639 aa15.71■□□□□ 0.11
TPM3-206ENST00000330188 ALG6Q9Y672 507 aa15.71■□□□□ 0.11
TPM3-206ENST00000330188 CYP26A1O43174 497 aa15.7■□□□□ 0.1
TPM3-206ENST00000330188 DKC1O60832 514 aaKnown RBP eCLIP15.7■□□□□ 0.1
TPM3-206ENST00000330188 PSAPP07602 524 aa15.7■□□□□ 0.1
TPM3-206ENST00000330188 SWSAP1Q6NVH7 229 aa15.7■□□□□ 0.1
TPM3-206ENST00000330188 SLC47A2Q86VL8 602 aa15.7■□□□□ 0.1
TPM3-206ENST00000330188 CCDC60Q8IWA6 550 aaPredicted RBP15.7■□□□□ 0.1
TPM3-206ENST00000330188 ALG3Q92685 438 aa15.7■□□□□ 0.1
TPM3-206ENST00000330188 CELF4Q9BZC1 486 aaKnown RBP15.7■□□□□ 0.1
TPM3-206ENST00000330188 JPH1Q9HDC5 661 aaPredicted RBP15.7■□□□□ 0.1
TPM3-206ENST00000330188 ACP6Q9NPH0 428 aa15.7■□□□□ 0.1
TPM3-206ENST00000330188 CYP39A1Q9NYL5 469 aa15.7■□□□□ 0.1
TPM3-206ENST00000330188 ATP2A1O14983 1001 aa15.7■□□□□ 0.1
TPM3-206ENST00000330188 GZMAP12544 262 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms