RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 ANKRD63C9JTQ0 380 aa13.91□□□□□ -0.18
DDX39A-202ENST00000324340 TEX33O43247 280 aa13.91□□□□□ -0.18
DDX39A-202ENST00000324340 ZRANB2O95218 330 aaKnown RBP eCLIP13.91□□□□□ -0.183e-7■■■■□ 25.7
DDX39A-202ENST00000324340 ASGR1P07306 291 aa13.91□□□□□ -0.18
DDX39A-202ENST00000324340 GJB1P08034 283 aa13.91□□□□□ -0.18
DDX39A-202ENST00000324340 SRGAP2CP0DJJ0 459 aa13.91□□□□□ -0.18
DDX39A-202ENST00000324340 EPB41P11171 864 aaKnown RBP13.91□□□□□ -0.18
DDX39A-202ENST00000324340 GNAT1P11488 350 aa13.91□□□□□ -0.18
DDX39A-202ENST00000324340 GARTP22102 1010 aa13.91□□□□□ -0.18
DDX39A-202ENST00000324340 PSMC2P35998 433 aaKnown RBP13.91□□□□□ -0.18
DDX39A-202ENST00000324340 CDC42EP1Q00587 391 aa13.91□□□□□ -0.18
DDX39A-202ENST00000324340 PPP2R3AQ06190 1150 aa13.91□□□□□ -0.18
DDX39A-202ENST00000324340 KCNA10Q16322 511 aa13.91□□□□□ -0.18
DDX39A-202ENST00000324340 VWA3BQ502W6 1294 aa13.91□□□□□ -0.18
DDX39A-202ENST00000324340 CXCL17Q6UXB2 119 aa13.91□□□□□ -0.18
DDX39A-202ENST00000324340 ZPBP2Q6X784 338 aa13.91□□□□□ -0.18
DDX39A-202ENST00000324340 ZBTB8OSQ8IWT0 167 aa13.91□□□□□ -0.18
DDX39A-202ENST00000324340 CCAR2Q8N163 923 aaKnown RBP13.91□□□□□ -0.18
DDX39A-202ENST00000324340 GOLGA6L1Q8N7Z2 621 aa13.91□□□□□ -0.18
DDX39A-202ENST00000324340 FBXL18Q96ME1 805 aa13.91□□□□□ -0.18
DDX39A-202ENST00000324340 CBWD1Q9BRT8 395 aa13.91□□□□□ -0.18
DDX39A-202ENST00000324340 NOC4LQ9BVI4 516 aaKnown RBP13.91□□□□□ -0.18
DDX39A-202ENST00000324340 FZD8Q9H461 694 aa13.91□□□□□ -0.18
DDX39A-202ENST00000324340 IFT122Q9HBG6 1241 aa13.91□□□□□ -0.18
DDX39A-202ENST00000324340 HDAC6Q9UBN7 1215 aa13.91□□□□□ -0.18
DDX39A-202ENST00000324340 A0A1W2PQC6 194 aa13.9□□□□□ -0.18
DDX39A-202ENST00000324340 C17orf102A2RUQ5 167 aa13.9□□□□□ -0.18
DDX39A-202ENST00000324340 HNRNPDLO14979 420 aaKnown RBP13.9□□□□□ -0.18
DDX39A-202ENST00000324340 KIAA0391O15091 583 aaKnown RBP13.9□□□□□ -0.18
DDX39A-202ENST00000324340 CABYRO75952 493 aa13.9□□□□□ -0.18
DDX39A-202ENST00000324340 CASP4P49662 377 aa13.9□□□□□ -0.18
DDX39A-202ENST00000324340 FAM187BQ17R55 369 aa13.9□□□□□ -0.18
DDX39A-202ENST00000324340 ARMCX5Q6P1M9 558 aa13.9□□□□□ -0.18
DDX39A-202ENST00000324340 RNF180Q86T96 592 aa13.9□□□□□ -0.18
DDX39A-202ENST00000324340 ZNF410Q86VK4 478 aa13.9□□□□□ -0.18
DDX39A-202ENST00000324340 C7orf31Q8N865 590 aa13.9□□□□□ -0.18
DDX39A-202ENST00000324340 XXYLT1Q8NBI6 393 aa13.9□□□□□ -0.18
DDX39A-202ENST00000324340 NLRP4Q96MN2 994 aa13.9□□□□□ -0.18
DDX39A-202ENST00000324340 TSEN34Q9BSV6 310 aaKnown RBP13.9□□□□□ -0.18
DDX39A-202ENST00000324340 NDST4Q9H3R1 872 aa13.9□□□□□ -0.18
DDX39A-202ENST00000324340 HSPBP1Q9NZL4 362 aa13.9□□□□□ -0.18
DDX39A-202ENST00000324340 ARMCX3Q9UH62 379 aaPredicted RBP13.9□□□□□ -0.18
DDX39A-202ENST00000324340 GTF2IRD1Q9UHL9 959 aa13.9□□□□□ -0.18
DDX39A-202ENST00000324340 AKT3Q9Y243 479 aa13.9□□□□□ -0.18
DDX39A-202ENST00000324340 FRMD4BQ9Y2L6 1034 aa13.9□□□□□ -0.18
DDX39A-202ENST00000324340 EXOC3O60645 756 aa13.89□□□□□ -0.19
DDX39A-202ENST00000324340 EDN1P05305 212 aa13.89□□□□□ -0.19
DDX39A-202ENST00000324340 PNMA6AP0CW24 399 aaPredicted RBP13.89□□□□□ -0.19
DDX39A-202ENST00000324340 CYP2C9P11712 490 aa13.89□□□□□ -0.19
DDX39A-202ENST00000324340 PHKA2P46019 1235 aa13.89□□□□□ -0.19
DDX39A-202ENST00000324340 LIG4P49917 911 aa13.89□□□□□ -0.19
DDX39A-202ENST00000324340 CYP2J2P51589 502 aa13.89□□□□□ -0.19
DDX39A-202ENST00000324340 GPC3P51654 580 aa13.89□□□□□ -0.19
DDX39A-202ENST00000324340 MBTD1Q05BQ5 628 aa13.89□□□□□ -0.19
DDX39A-202ENST00000324340 ENPEPQ07075 957 aa13.89□□□□□ -0.19
DDX39A-202ENST00000324340 LRMPQ12912 555 aa13.89□□□□□ -0.19
DDX39A-202ENST00000324340 TBX2Q13207 712 aaPredicted RBP13.89□□□□□ -0.19
DDX39A-202ENST00000324340 MAPK6Q16659 721 aa13.89□□□□□ -0.19
DDX39A-202ENST00000324340 NBPF20Q3BBV1 942 aa13.89□□□□□ -0.19
DDX39A-202ENST00000324340 COL13A1Q5TAT6 717 aaPredicted RBP13.89□□□□□ -0.19
DDX39A-202ENST00000324340 SPECC1LQ69YQ0 1117 aa13.89□□□□□ -0.19
DDX39A-202ENST00000324340 SLFN12LQ6IEE8 588 aa13.89□□□□□ -0.19
DDX39A-202ENST00000324340 TMC6Q7Z403 805 aa13.89□□□□□ -0.19
DDX39A-202ENST00000324340 FAM186BQ8IYM0 893 aa13.89□□□□□ -0.19
DDX39A-202ENST00000324340 CCDC150Q8NCX0 1101 aa13.89□□□□□ -0.19
DDX39A-202ENST00000324340 ERGIC2Q96RQ1 377 aa13.89□□□□□ -0.19
DDX39A-202ENST00000324340 MRPL4Q9BYD3 311 aaKnown RBP13.89□□□□□ -0.19
DDX39A-202ENST00000324340 ZNF446Q9NWS9 450 aa13.89□□□□□ -0.19
DDX39A-202ENST00000324340 A0A087WZ62 844 aa13.88□□□□□ -0.19
DDX39A-202ENST00000324340 MOXD2PA6NHM9 499 aa13.88□□□□□ -0.19
DDX39A-202ENST00000324340 ACKR2O00590 384 aa13.88□□□□□ -0.19
DDX39A-202ENST00000324340 TREHO43280 583 aa13.88□□□□□ -0.19
DDX39A-202ENST00000324340 GPR32O75388 356 aa13.88□□□□□ -0.19
DDX39A-202ENST00000324340 VTNP04004 478 aa13.88□□□□□ -0.19
DDX39A-202ENST00000324340 PRKCBP05771 671 aa13.88□□□□□ -0.19
DDX39A-202ENST00000324340 TNNT3P45378 269 aaPredicted RBP13.88□□□□□ -0.19
DDX39A-202ENST00000324340 CHMP4BP1P59074 171 aa13.88□□□□□ -0.19
DDX39A-202ENST00000324340 UBXN1Q04323 297 aa13.88□□□□□ -0.19
DDX39A-202ENST00000324340 ELF2Q15723 593 aa13.88□□□□□ -0.19
DDX39A-202ENST00000324340 TAF2Q6P1X5 1199 aa13.88□□□□□ -0.19
DDX39A-202ENST00000324340 TMCO3Q6UWJ1 677 aa13.88□□□□□ -0.19
DDX39A-202ENST00000324340 RUFY4Q6ZNE9 571 aa13.88□□□□□ -0.19
DDX39A-202ENST00000324340 TSHZ1Q6ZSZ6 1077 aa13.88□□□□□ -0.19
DDX39A-202ENST00000324340 SRGAP1Q7Z6B7 1085 aa13.88□□□□□ -0.19
DDX39A-202ENST00000324340 NME8Q8N427 588 aa13.88□□□□□ -0.19
DDX39A-202ENST00000324340 SLC35C1Q96A29 364 aa13.88□□□□□ -0.19
DDX39A-202ENST00000324340 EXOC4Q96A65 974 aa13.88□□□□□ -0.19
DDX39A-202ENST00000324340 BICD1Q96G01 975 aa13.88□□□□□ -0.19
DDX39A-202ENST00000324340 FDXACB1Q9BRP7 624 aaPredicted RBP13.88□□□□□ -0.19
DDX39A-202ENST00000324340 TARS2Q9BW92 718 aaKnown RBP13.88□□□□□ -0.19
DDX39A-202ENST00000324340 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.88□□□□□ -0.197e-7■■■□□ 16.6
DDX39A-202ENST00000324340 ADAMTS10Q9H324 1103 aa13.88□□□□□ -0.19
DDX39A-202ENST00000324340 PCIF1Q9H4Z3 704 aa13.88□□□□□ -0.19
DDX39A-202ENST00000324340 MINDY3Q9H8M7 445 aa13.88□□□□□ -0.19
DDX39A-202ENST00000324340 PAK6Q9NQU5 681 aaPredicted RBP13.88□□□□□ -0.19
DDX39A-202ENST00000324340 PRMT7Q9NVM4 692 aaPredicted RBP13.88□□□□□ -0.19
DDX39A-202ENST00000324340 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.88□□□□□ -0.19
DDX39A-202ENST00000324340 GRIN2DO15399 1336 aa13.88□□□□□ -0.19
DDX39A-202ENST00000324340 A0A0B4J269 797 aa13.87□□□□□ -0.19
DDX39A-202ENST00000324340 ABLIM1O14639 778 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms