RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 CELF3Q5SZQ8 465 aaKnown RBP9.94□□□□□ -0.82
PTPRE-202ENST00000306042 CEP128Q6ZU80 1094 aa9.94□□□□□ -0.82
PTPRE-202ENST00000306042 HPS3Q969F9 1004 aa9.94□□□□□ -0.82
PTPRE-202ENST00000306042 KIFC3Q9BVG8 833 aa9.94□□□□□ -0.82
PTPRE-202ENST00000306042 NGRNQ9NPE2 291 aaKnown RBP9.94□□□□□ -0.82
PTPRE-202ENST00000306042 ENTPD7Q9NQZ7 604 aa9.94□□□□□ -0.82
PTPRE-202ENST00000306042 EPN1Q9Y6I3 576 aaPredicted RBP9.94□□□□□ -0.82
PTPRE-202ENST00000306042 MED24O75448 989 aa9.94□□□□□ -0.82
PTPRE-202ENST00000306042 PCSK1P29120 753 aa9.94□□□□□ -0.82
PTPRE-202ENST00000306042 ZBED6P86452 979 aa9.94□□□□□ -0.82
PTPRE-202ENST00000306042 PTPROQ16827 1216 aa9.94□□□□□ -0.82
PTPRE-202ENST00000306042 SHROOM1Q2M3G4 852 aaPredicted RBP9.94□□□□□ -0.82
PTPRE-202ENST00000306042 COPS5Q92905 334 aa9.94□□□□□ -0.82
PTPRE-202ENST00000306042 GPRC5CQ9NQ84 441 aa9.94□□□□□ -0.82
PTPRE-202ENST00000306042 UBQLN1Q9UMX0 589 aaKnown RBP9.94□□□□□ -0.82
PTPRE-202ENST00000306042 NDC80O14777 642 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 BNIP3LO60238 219 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 B3GAT3O94766 335 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 RGPD2P0DJD1 1756 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 AFDNP55196 1824 aaKnown RBP9.93□□□□□ -0.82
PTPRE-202ENST00000306042 ENOSF1Q7L5Y1 443 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 SLC51AQ86UW1 340 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 BRI3BPQ8WY22 251 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 SENP7Q9BQF6 1050 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 SEZ6LQ9BYH1 1024 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 AGXT2Q9BYV1 514 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 DONSONQ9NYP3 566 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 EHD2Q9NZN4 543 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 BAZ2BQ9UIF8 2168 aaKnown RBP9.93□□□□□ -0.82
PTPRE-202ENST00000306042 FAM86B1E9PN63 330 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 FAM86B2P0C5J1 330 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 MYBP10242 640 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 RALAP11233 206 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 KRT10P13645 584 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 SARNPP82979 210 aaKnown RBP9.93□□□□□ -0.82
PTPRE-202ENST00000306042 EVX2Q03828 476 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 IKBKEQ14164 716 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 BTG3Q14201 252 aaPredicted RBP9.93□□□□□ -0.82
PTPRE-202ENST00000306042 LONRF2Q1L5Z9 754 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 SGO2Q562F6 1265 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 KAZNQ674X7 775 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 MTERF4Q7Z6M4 381 aaKnown RBP9.93□□□□□ -0.82
PTPRE-202ENST00000306042 PHLDB2Q86SQ0 1253 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 TTC30AQ86WT1 665 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 FBXL16Q8N461 479 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 CCDC63Q8NA47 563 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 GAS2L1Q99501 681 aaPredicted RBP9.93□□□□□ -0.82
PTPRE-202ENST00000306042 GPR25O00155 361 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 FOXN1O15353 648 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 HSF2BPO75031 334 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 MAP2K2P36507 400 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 EVCP57679 992 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 TUBB4BP68371 445 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 USP49Q70CQ1 688 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 SRGAP1Q7Z6B7 1085 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 L3MBTL3Q96JM7 780 aaPredicted RBP9.93□□□□□ -0.82
PTPRE-202ENST00000306042 PORCNQ9H237 461 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 ADAM22Q9P0K1 906 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 TBX20Q9UMR3 447 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 C4BP0C0L5 1744 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 NWD2Q9ULI1 1742 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 UBE4BO95155 1302 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 H7C0C1 242 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 EIF3DO15371 548 aaKnown RBP eCLIP9.93□□□□□ -0.82
PTPRE-202ENST00000306042 ATP5OP48047 213 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 RAB27AP51159 221 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 SNRPFP62306 86 aaKnown RBP9.93□□□□□ -0.82
PTPRE-202ENST00000306042 NCOA4Q13772 614 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 CDO1Q16878 200 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 CFAP221Q4G0U5 840 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 ZNF771Q7L3S4 317 aaPredicted RBP9.93□□□□□ -0.82
PTPRE-202ENST00000306042 RFX6Q8HWS3 928 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 CCNYQ8ND76 341 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 SEPT5Q99719 369 aaPredicted RBP9.93□□□□□ -0.82
PTPRE-202ENST00000306042 INTS2Q9H0H0 1204 aaKnown RBP9.93□□□□□ -0.82
PTPRE-202ENST00000306042 STAP1Q9ULZ2 295 aa9.93□□□□□ -0.82
PTPRE-202ENST00000306042 UTP11Q9Y3A2 253 aaKnown RBP9.93□□□□□ -0.82
PTPRE-202ENST00000306042 NRCAMQ92823 1304 aa9.92□□□□□ -0.82
PTPRE-202ENST00000306042 URODP06132 367 aa9.92□□□□□ -0.82
PTPRE-202ENST00000306042 PNPLA4P41247 253 aa9.92□□□□□ -0.82
PTPRE-202ENST00000306042 SGSM1Q2NKQ1 1148 aa9.92□□□□□ -0.82
PTPRE-202ENST00000306042 NBPF20Q3BBV1 942 aa9.92□□□□□ -0.82
PTPRE-202ENST00000306042 BTBD8Q5XKL5 378 aa9.92□□□□□ -0.82
PTPRE-202ENST00000306042 LRRC31Q6UY01 552 aa9.92□□□□□ -0.82
PTPRE-202ENST00000306042 TMC7Q7Z402 723 aa9.92□□□□□ -0.82
PTPRE-202ENST00000306042 FRMD5Q7Z6J6 570 aa9.92□□□□□ -0.82
PTPRE-202ENST00000306042 TRPV2Q9Y5S1 764 aa9.92□□□□□ -0.82
PTPRE-202ENST00000306042 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.92□□□□□ -0.82
PTPRE-202ENST00000306042 SCINQ9Y6U3 715 aa9.92□□□□□ -0.82
PTPRE-202ENST00000306042 CRYBG1Q9Y4K1 1723 aa9.92□□□□□ -0.82
PTPRE-202ENST00000306042 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.92□□□□□ -0.82
PTPRE-202ENST00000306042 KCNK3O14649 394 aa9.92□□□□□ -0.82
PTPRE-202ENST00000306042 EXTL3O43909 919 aa9.92□□□□□ -0.82
PTPRE-202ENST00000306042 SERPING1P05155 500 aa9.92□□□□□ -0.82
PTPRE-202ENST00000306042 GNA15P30679 374 aa9.92□□□□□ -0.82
PTPRE-202ENST00000306042 RECQLP46063 649 aaPredicted RBP9.92□□□□□ -0.82
PTPRE-202ENST00000306042 LAMTOR4Q0VGL1 99 aa9.92□□□□□ -0.82
PTPRE-202ENST00000306042 MGAT5BQ3V5L5 792 aa9.92□□□□□ -0.82
PTPRE-202ENST00000306042 GLRA4Q5JXX5 417 aa9.92□□□□□ -0.82
PTPRE-202ENST00000306042 C8orf74Q6P047 294 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms