RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 MMP19Q99542 508 aa12.34□□□□□ -0.43
SCG2-201ENST00000305409 NTPCRQ9BSD7 190 aaKnown RBP12.34□□□□□ -0.43
SCG2-201ENST00000305409 TARS2Q9BW92 718 aaKnown RBP12.34□□□□□ -0.43
SCG2-201ENST00000305409 HAPLN2Q9GZV7 340 aa12.34□□□□□ -0.43
SCG2-201ENST00000305409 ARFGAP3Q9NP61 516 aa12.34□□□□□ -0.43
SCG2-201ENST00000305409 LUC7LQ9NQ29 371 aaKnown RBP12.34□□□□□ -0.43
SCG2-201ENST00000305409 BZW2Q9Y6E2 419 aaKnown RBP12.34□□□□□ -0.43
SCG2-201ENST00000305409 OTOFQ9HC10 1997 aa12.34□□□□□ -0.43
SCG2-201ENST00000305409 PTPRFP10586 1907 aa12.34□□□□□ -0.43
SCG2-201ENST00000305409 DKC1O60832 514 aaKnown RBP eCLIP12.34□□□□□ -0.43
SCG2-201ENST00000305409 ATG7O95352 703 aa12.34□□□□□ -0.43
SCG2-201ENST00000305409 EDNRBP24530 442 aa12.34□□□□□ -0.43
SCG2-201ENST00000305409 LIG4P49917 911 aa12.34□□□□□ -0.43
SCG2-201ENST00000305409 NLRP11P59045 1033 aaKnown RBP12.34□□□□□ -0.43
SCG2-201ENST00000305409 PPIL2Q13356 520 aa12.34□□□□□ -0.43
SCG2-201ENST00000305409 KCTD2Q14681 263 aa12.34□□□□□ -0.43
SCG2-201ENST00000305409 CCDC181Q5TID7 509 aa12.34□□□□□ -0.43
SCG2-201ENST00000305409 C12orf56Q8IXR9 622 aa12.34□□□□□ -0.43
SCG2-201ENST00000305409 TATDN2Q93075 761 aa12.34□□□□□ -0.43
SCG2-201ENST00000305409 KREMEN1Q96MU8 473 aa12.34□□□□□ -0.43
SCG2-201ENST00000305409 ARHGAP28Q9P2N2 729 aa12.34□□□□□ -0.43
SCG2-201ENST00000305409 KCNH4Q9UQ05 1017 aa12.34□□□□□ -0.43
SCG2-201ENST00000305409 DNAH12Q6ZR08 3092 aa12.34□□□□□ -0.43
SCG2-201ENST00000305409 CYP26A1O43174 497 aa12.33□□□□□ -0.43
SCG2-201ENST00000305409 CLSTN1O94985 981 aa12.33□□□□□ -0.43
SCG2-201ENST00000305409 SGPL1O95470 568 aa12.33□□□□□ -0.43
SCG2-201ENST00000305409 H2AFZP0C0S5 128 aa12.33□□□□□ -0.43
SCG2-201ENST00000305409 PLA2G4AP47712 749 aa12.33□□□□□ -0.43
SCG2-201ENST00000305409 MYBPC2Q14324 1141 aa12.33□□□□□ -0.43
SCG2-201ENST00000305409 H2AFVQ71UI9 128 aa12.33□□□□□ -0.43
SCG2-201ENST00000305409 ARMC9Q7Z3E5 817 aa12.33□□□□□ -0.43
SCG2-201ENST00000305409 VPS36Q86VN1 386 aa12.33□□□□□ -0.43
SCG2-201ENST00000305409 RNF10Q8N5U6 811 aaKnown RBP12.33□□□□□ -0.43
SCG2-201ENST00000305409 SLC7A3Q8WY07 619 aa12.33□□□□□ -0.43
SCG2-201ENST00000305409 CEP350Q5VT06 3117 aa12.33□□□□□ -0.44
SCG2-201ENST00000305409 GLTPD2A6NH11 291 aa12.33□□□□□ -0.44
SCG2-201ENST00000305409 SRGAP2CP0DJJ0 459 aa12.33□□□□□ -0.44
SCG2-201ENST00000305409 TNFAIP3P21580 790 aa12.33□□□□□ -0.44
SCG2-201ENST00000305409 CYP24A1Q07973 514 aa12.33□□□□□ -0.44
SCG2-201ENST00000305409 CETN1Q12798 172 aa12.33□□□□□ -0.44
SCG2-201ENST00000305409 BMS1Q14692 1282 aaKnown RBP12.33□□□□□ -0.44
SCG2-201ENST00000305409 SV2AQ7L0J3 742 aa12.33□□□□□ -0.44
SCG2-201ENST00000305409 MSANTD4Q8NCY6 345 aa12.33□□□□□ -0.44
SCG2-201ENST00000305409 SPATA4Q8NEY3 305 aa12.33□□□□□ -0.44
SCG2-201ENST00000305409 DEPTORQ8TB45 409 aa12.33□□□□□ -0.44
SCG2-201ENST00000305409 ZNF516Q92618 1163 aa12.33□□□□□ -0.44
SCG2-201ENST00000305409 ARHGEF26Q96DR7 871 aa12.33□□□□□ -0.44
SCG2-201ENST00000305409 L3MBTL3Q96JM7 780 aaPredicted RBP12.33□□□□□ -0.44
SCG2-201ENST00000305409 PPP1R16BQ96T49 567 aa12.33□□□□□ -0.44
SCG2-201ENST00000305409 LRRC1Q9BTT6 524 aa12.33□□□□□ -0.44
SCG2-201ENST00000305409 DHX33Q9H6R0 707 aaKnown RBP12.33□□□□□ -0.44
SCG2-201ENST00000305409 PDE11AQ9HCR9 933 aa12.33□□□□□ -0.44
SCG2-201ENST00000305409 MYH9P35579 1960 aaKnown RBP12.33□□□□□ -0.44
SCG2-201ENST00000305409 NOP56O00567 594 aaKnown RBP12.32□□□□□ -0.44
SCG2-201ENST00000305409 ERVK-9P63128 1117 aa12.32□□□□□ -0.44
SCG2-201ENST00000305409 SLC47A2Q86VL8 602 aa12.32□□□□□ -0.44
SCG2-201ENST00000305409 CDR2LQ86X02 465 aaPredicted RBP12.32□□□□□ -0.44
SCG2-201ENST00000305409 GPD1LQ8N335 351 aa12.32□□□□□ -0.44
SCG2-201ENST00000305409 SLC30A5Q8TAD4 765 aa12.32□□□□□ -0.44
SCG2-201ENST00000305409 SEPT1Q8WYJ6 367 aa12.32□□□□□ -0.44
SCG2-201ENST00000305409 SPATA33Q96N06 139 aa12.32□□□□□ -0.44
SCG2-201ENST00000305409 CEP89Q96ST8 783 aa12.32□□□□□ -0.44
SCG2-201ENST00000305409 RBM12Q9NTZ6 932 aaKnown RBP12.32□□□□□ -0.44
SCG2-201ENST00000305409 PAPPA2Q9BXP8 1791 aa12.32□□□□□ -0.44
SCG2-201ENST00000305409 K7ERI5 159 aa12.32□□□□□ -0.44
SCG2-201ENST00000305409 KCNK3O14649 394 aa12.32□□□□□ -0.44
SCG2-201ENST00000305409 ATMINO43313 823 aaPredicted RBP12.32□□□□□ -0.44
SCG2-201ENST00000305409 MYBL2P10244 700 aa12.32□□□□□ -0.44
SCG2-201ENST00000305409 OSBPP22059 807 aa12.32□□□□□ -0.44
SCG2-201ENST00000305409 CKAP4Q07065 602 aaKnown RBP12.32□□□□□ -0.44
SCG2-201ENST00000305409 NEDD9Q14511 834 aa12.32□□□□□ -0.44
SCG2-201ENST00000305409 BEND6Q5SZJ8 279 aaPredicted RBP12.32□□□□□ -0.44
SCG2-201ENST00000305409 SPOPLQ6IQ16 392 aa12.32□□□□□ -0.44
SCG2-201ENST00000305409 METTL7BQ6UX53 244 aa12.32□□□□□ -0.44
SCG2-201ENST00000305409 ZBTB33Q86T24 672 aa12.32□□□□□ -0.44
SCG2-201ENST00000305409 RPUSD2Q8IZ73 545 aaKnown RBP12.32□□□□□ -0.44
SCG2-201ENST00000305409 PRPF31Q8WWY3 499 aaKnown RBP12.32□□□□□ -0.44
SCG2-201ENST00000305409 FUT8Q9BYC5 575 aa12.32□□□□□ -0.44
SCG2-201ENST00000305409 THAP2Q9H0W7 228 aa12.32□□□□□ -0.44
SCG2-201ENST00000305409 DMGDHQ9UI17 866 aaKnown RBP12.32□□□□□ -0.44
SCG2-201ENST00000305409 PCDHGC5Q9Y5F6 944 aa12.32□□□□□ -0.44
SCG2-201ENST00000305409 BRCA2P51587 3418 aa12.32□□□□□ -0.44
SCG2-201ENST00000305409 PTPRJQ12913 1337 aa12.32□□□□□ -0.44
SCG2-201ENST00000305409 WDR81Q562E7 1941 aa12.31□□□□□ -0.44
SCG2-201ENST00000305409 IGKV6D-21A0A0A0MT36 114 aa12.31□□□□□ -0.44
SCG2-201ENST00000305409 CCDC151A5D8V7 595 aa12.31□□□□□ -0.44
SCG2-201ENST00000305409 CSDE1O75534 798 aaKnown RBP12.31□□□□□ -0.44
SCG2-201ENST00000305409 TNNI1P19237 187 aa12.31□□□□□ -0.44
SCG2-201ENST00000305409 SSTR3P32745 418 aaPredicted RBP12.31□□□□□ -0.44
SCG2-201ENST00000305409 IGBP1P78318 339 aa12.31□□□□□ -0.44
SCG2-201ENST00000305409 STRN3Q13033 797 aa12.31□□□□□ -0.44
SCG2-201ENST00000305409 CAPSQ13938 189 aa12.31□□□□□ -0.44
SCG2-201ENST00000305409 MEI1Q5TIA1 1274 aa12.31□□□□□ -0.44
SCG2-201ENST00000305409 KRT39Q6A163 491 aa12.31□□□□□ -0.44
SCG2-201ENST00000305409 KRT222Q8N1A0 295 aa12.31□□□□□ -0.44
SCG2-201ENST00000305409 TPCN2Q8NHX9 752 aa12.31□□□□□ -0.44
SCG2-201ENST00000305409 PPP1R13LQ8WUF5 828 aa12.31□□□□□ -0.44
SCG2-201ENST00000305409 PCDHB18PQ96TA0 734 aa12.31□□□□□ -0.44
SCG2-201ENST00000305409 AGPAT1Q99943 283 aa12.31□□□□□ -0.44
SCG2-201ENST00000305409 SYT11Q9BT88 431 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms