RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 GBP3Q9H0R5 595 aa10.44□□□□□ -0.74
CNOT9-202ENST00000295701 ZBP1Q9H171 429 aa10.44□□□□□ -0.74
CNOT9-202ENST00000295701 SUCLA2Q9P2R7 463 aaPredicted RBP10.44□□□□□ -0.74
CNOT9-202ENST00000295701 DNAJB4Q9UDY4 337 aa10.44□□□□□ -0.74
CNOT9-202ENST00000295701 LIMD1Q9UGP4 676 aa10.44□□□□□ -0.74
CNOT9-202ENST00000295701 INPP5FQ9Y2H2 1132 aa10.44□□□□□ -0.74
CNOT9-202ENST00000295701 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.43□□□□□ -0.74
CNOT9-202ENST00000295701 FAM187AA6NFU0 413 aa10.43□□□□□ -0.74
CNOT9-202ENST00000295701 EML1O00423 815 aa10.43□□□□□ -0.74
CNOT9-202ENST00000295701 OFD1O75665 1012 aa10.43□□□□□ -0.74
CNOT9-202ENST00000295701 SFNP31947 248 aa10.43□□□□□ -0.74
CNOT9-202ENST00000295701 SLC11A1P49279 550 aa10.43□□□□□ -0.74
CNOT9-202ENST00000295701 MMP16P51512 607 aa10.43□□□□□ -0.74
CNOT9-202ENST00000295701 JAK3P52333 1124 aa10.43□□□□□ -0.74
CNOT9-202ENST00000295701 TOB2Q14106 344 aaPredicted RBP10.43□□□□□ -0.74
CNOT9-202ENST00000295701 NPY5RQ15761 445 aa10.43□□□□□ -0.74
CNOT9-202ENST00000295701 Q4G0T1 1027 aa10.43□□□□□ -0.74
CNOT9-202ENST00000295701 XKR3Q5GH77 459 aa10.43□□□□□ -0.74
CNOT9-202ENST00000295701 TWF2Q6IBS0 349 aaKnown RBP10.43□□□□□ -0.74
CNOT9-202ENST00000295701 CES5AQ6NT32 575 aa10.43□□□□□ -0.74
CNOT9-202ENST00000295701 ZNF280BQ86YH2 543 aa10.43□□□□□ -0.74
CNOT9-202ENST00000295701 RHPN2Q8IUC4 686 aa10.43□□□□□ -0.74
CNOT9-202ENST00000295701 TMEM105Q8N8V8 129 aa10.43□□□□□ -0.74
CNOT9-202ENST00000295701 CCDC148Q8NFR7 591 aa10.43□□□□□ -0.74
CNOT9-202ENST00000295701 TMEM169Q96HH4 297 aa10.43□□□□□ -0.74
CNOT9-202ENST00000295701 IGSF21Q96ID5 467 aa10.43□□□□□ -0.74
CNOT9-202ENST00000295701 PRRX2Q99811 253 aa10.43□□□□□ -0.74
CNOT9-202ENST00000295701 REPIN1Q9BWE0 567 aaKnown RBP10.43□□□□□ -0.74
CNOT9-202ENST00000295701 TBC1D13Q9NVG8 400 aa10.43□□□□□ -0.74
CNOT9-202ENST00000295701 DACT1Q9NYF0 836 aa10.43□□□□□ -0.74
CNOT9-202ENST00000295701 PIN4Q9Y237 131 aaKnown RBP10.43□□□□□ -0.74
CNOT9-202ENST00000295701 NR2E1Q9Y466 385 aa10.43□□□□□ -0.74
CNOT9-202ENST00000295701 DENND4AQ7Z401 1863 aa10.42□□□□□ -0.74
CNOT9-202ENST00000295701 RIF1Q5UIP0 2472 aaKnown RBP10.42□□□□□ -0.74
CNOT9-202ENST00000295701 M0R2N6 131 aa10.42□□□□□ -0.74
CNOT9-202ENST00000295701 ZBTB24O43167 697 aaPredicted RBP10.42□□□□□ -0.74
CNOT9-202ENST00000295701 SLC37A4O43826 429 aa10.42□□□□□ -0.74
CNOT9-202ENST00000295701 DDHD2O94830 711 aa10.42□□□□□ -0.74
CNOT9-202ENST00000295701 SSBP05455 408 aaKnown RBP eCLIP10.42□□□□□ -0.74
CNOT9-202ENST00000295701 MYBP10242 640 aa10.42□□□□□ -0.74
CNOT9-202ENST00000295701 CTSAP10619 480 aa10.42□□□□□ -0.74
CNOT9-202ENST00000295701 NPEPPSP55786 919 aa10.42□□□□□ -0.74
CNOT9-202ENST00000295701 ITIH3Q06033 890 aa10.42□□□□□ -0.74
CNOT9-202ENST00000295701 NOMO2Q5JPE7 1267 aa10.42□□□□□ -0.74
CNOT9-202ENST00000295701 TMC5Q6UXY8 1006 aa10.42□□□□□ -0.74
CNOT9-202ENST00000295701 ANO5Q75V66 913 aa10.42□□□□□ -0.74
CNOT9-202ENST00000295701 CENPQQ7L2Z9 268 aaPredicted RBP10.42□□□□□ -0.74
CNOT9-202ENST00000295701 DDX53Q86TM3 631 aaKnown RBP10.42□□□□□ -0.74
CNOT9-202ENST00000295701 FBXL16Q8N461 479 aa10.42□□□□□ -0.74
CNOT9-202ENST00000295701 ETNPPLQ8TBG4 499 aa10.42□□□□□ -0.74
CNOT9-202ENST00000295701 NLRP4Q96MN2 994 aa10.42□□□□□ -0.74
CNOT9-202ENST00000295701 MINDY3Q9H8M7 445 aa10.42□□□□□ -0.74
CNOT9-202ENST00000295701 CHST12Q9NRB3 414 aa10.42□□□□□ -0.74
CNOT9-202ENST00000295701 FAM105AQ9NUU6 356 aa10.42□□□□□ -0.74
CNOT9-202ENST00000295701 WRAP73Q9P2S5 460 aaPredicted RBP10.42□□□□□ -0.74
CNOT9-202ENST00000295701 PCDHA4Q9UN74 947 aa10.42□□□□□ -0.74
CNOT9-202ENST00000295701 SORCS3Q9UPU3 1222 aa10.42□□□□□ -0.74
CNOT9-202ENST00000295701 CYP3A7-CYP3A51PA0A087WV96 503 aa10.41□□□□□ -0.74
CNOT9-202ENST00000295701 MAFO75444 373 aaPredicted RBP10.41□□□□□ -0.74
CNOT9-202ENST00000295701 CYP3A7P24462 503 aa10.41□□□□□ -0.74
CNOT9-202ENST00000295701 MTHFRP42898 656 aa10.41□□□□□ -0.74
CNOT9-202ENST00000295701 EVCP57679 992 aa10.41□□□□□ -0.74
CNOT9-202ENST00000295701 GUCA2AQ02747 115 aa10.41□□□□□ -0.74
CNOT9-202ENST00000295701 RNASELQ05823 741 aaKnown RBP10.41□□□□□ -0.74
CNOT9-202ENST00000295701 SSRP1Q08945 709 aaKnown RBP10.41□□□□□ -0.74
CNOT9-202ENST00000295701 STK3Q13188 491 aa10.41□□□□□ -0.74
CNOT9-202ENST00000295701 INF2Q27J81 1249 aa10.41□□□□□ -0.74
CNOT9-202ENST00000295701 ATAT1Q5SQI0 421 aa10.41□□□□□ -0.74
CNOT9-202ENST00000295701 KIAA1841Q6NSI8 718 aa10.41□□□□□ -0.74
CNOT9-202ENST00000295701 AGMOQ6ZNB7 445 aa10.41□□□□□ -0.74
CNOT9-202ENST00000295701 ASCL5Q7RTU5 278 aa10.41□□□□□ -0.74
CNOT9-202ENST00000295701 TAS1R1Q7RTX1 841 aa10.41□□□□□ -0.74
CNOT9-202ENST00000295701 CATSPER4Q7RTX7 472 aa10.41□□□□□ -0.74
CNOT9-202ENST00000295701 BLIDQ8IZY5 108 aa10.41□□□□□ -0.74
CNOT9-202ENST00000295701 TDRD5Q8NAT2 981 aaKnown RBP10.41□□□□□ -0.74
CNOT9-202ENST00000295701 TMEM87AQ8NBN3 555 aa10.41□□□□□ -0.74
CNOT9-202ENST00000295701 TMEM143Q96AN5 459 aa10.41□□□□□ -0.74
CNOT9-202ENST00000295701 MBOAT7Q96N66 472 aa10.41□□□□□ -0.74
CNOT9-202ENST00000295701 NECTIN4Q96NY8 510 aa10.41□□□□□ -0.74
CNOT9-202ENST00000295701 TRAIPQ9BWF2 469 aa10.41□□□□□ -0.74
CNOT9-202ENST00000295701 MRPL9Q9BYD2 267 aaKnown RBP10.41□□□□□ -0.74
CNOT9-202ENST00000295701 IFT122Q9HBG6 1241 aa10.41□□□□□ -0.74
CNOT9-202ENST00000295701 SH3GLB2Q9NR46 395 aa10.41□□□□□ -0.74
CNOT9-202ENST00000295701 GJB4Q9NTQ9 266 aa10.41□□□□□ -0.74
CNOT9-202ENST00000295701 DBR1Q9UK59 544 aaKnown RBP10.41□□□□□ -0.74
CNOT9-202ENST00000295701 KCNJ14Q9UNX9 436 aa10.41□□□□□ -0.74
CNOT9-202ENST00000295701 FAM186AA6NE01 2351 aa10.41□□□□□ -0.74
CNOT9-202ENST00000295701 DOCK8Q8NF50 2099 aa10.41□□□□□ -0.74
CNOT9-202ENST00000295701 MTCL1Q9Y4B5 1905 aaKnown RBP10.41□□□□□ -0.74
CNOT9-202ENST00000295701 ZBTB39O15060 712 aa10.4□□□□□ -0.74
CNOT9-202ENST00000295701 PI15O43692 258 aa10.4□□□□□ -0.74
CNOT9-202ENST00000295701 LILRB3O75022 631 aa10.4□□□□□ -0.74
CNOT9-202ENST00000295701 DXOO77932 396 aaKnown RBP10.4□□□□□ -0.74
CNOT9-202ENST00000295701 SRGAP2CP0DJJ0 459 aa10.4□□□□□ -0.74
CNOT9-202ENST00000295701 SFPQP23246 707 aaKnown RBP eCLIP10.4□□□□□ -0.74
CNOT9-202ENST00000295701 DNM2P50570 870 aa10.4□□□□□ -0.74
CNOT9-202ENST00000295701 POLGP54098 1239 aaPredicted RBP10.4□□□□□ -0.74
CNOT9-202ENST00000295701 MTMR3Q13615 1198 aa10.4□□□□□ -0.74
CNOT9-202ENST00000295701 PTPN14Q15678 1187 aa10.4□□□□□ -0.74
CNOT9-202ENST00000295701 UBXN11Q5T124 520 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms