RNA–Protein interactions for RNA: ENST00000293373.10

NCKAP1L-201, Transcript of NCK associated protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1L, Length 9,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1L-201ENST00000293373 CUL1Q13616 776 aa8.38□□□□□ -1.07
NCKAP1L-201ENST00000293373 CRY2Q49AN0 593 aa8.38□□□□□ -1.07
NCKAP1L-201ENST00000293373 ZC3H15Q8WU90 426 aaKnown RBP8.38□□□□□ -1.07
NCKAP1L-201ENST00000293373 NUP85Q9BW27 656 aa8.38□□□□□ -1.07
NCKAP1L-201ENST00000293373 UBQLN1Q9UMX0 589 aaKnown RBP8.38□□□□□ -1.07
NCKAP1L-201ENST00000293373 PSMC1P62191 440 aaKnown RBP8.38□□□□□ -1.07
NCKAP1L-201ENST00000293373 PTPROQ16827 1216 aa8.38□□□□□ -1.07
NCKAP1L-201ENST00000293373 EFCAB12Q6NXP0 572 aa8.38□□□□□ -1.07
NCKAP1L-201ENST00000293373 AFG1LQ8WV93 481 aa8.38□□□□□ -1.07
NCKAP1L-201ENST00000293373 MAGOHBQ96A72 148 aaKnown RBP8.38□□□□□ -1.07
NCKAP1L-201ENST00000293373 RIOX1Q9H6W3 641 aa8.38□□□□□ -1.07
NCKAP1L-201ENST00000293373 WDR35Q9P2L0 1181 aa8.38□□□□□ -1.07
NCKAP1L-201ENST00000293373 CCDC188H7C350 402 aa8.38□□□□□ -1.07
NCKAP1L-201ENST00000293373 NNMTP40261 264 aa8.38□□□□□ -1.07
NCKAP1L-201ENST00000293373 DRAP1Q14919 205 aaPredicted RBP8.38□□□□□ -1.07
NCKAP1L-201ENST00000293373 YAF2Q8IY57 180 aa8.38□□□□□ -1.07
NCKAP1L-201ENST00000293373 FBXL16Q8N461 479 aa8.38□□□□□ -1.07
NCKAP1L-201ENST00000293373 DNAAF3Q8N9W5 541 aa8.38□□□□□ -1.07
NCKAP1L-201ENST00000293373 ZNF564Q8TBZ8 553 aaPredicted RBP8.38□□□□□ -1.07
NCKAP1L-201ENST00000293373 SENP2Q9HC62 589 aa8.38□□□□□ -1.07
NCKAP1L-201ENST00000293373 PHLPP1O60346 1717 aa8.38□□□□□ -1.07
NCKAP1L-201ENST00000293373 FTCDO95954 541 aa8.38□□□□□ -1.07
NCKAP1L-201ENST00000293373 CDK17Q00537 523 aa8.38□□□□□ -1.07
NCKAP1L-201ENST00000293373 RNF10Q8N5U6 811 aaKnown RBP8.38□□□□□ -1.07
NCKAP1L-201ENST00000293373 ANKS1AQ92625 1134 aa8.38□□□□□ -1.07
NCKAP1L-201ENST00000293373 PXMP2Q9NR77 195 aa8.38□□□□□ -1.07
NCKAP1L-201ENST00000293373 BCAP29Q9UHQ4 241 aa8.38□□□□□ -1.07
NCKAP1L-201ENST00000293373 HERVK_113P62684 666 aa8.38□□□□□ -1.07
NCKAP1L-201ENST00000293373 WDR72Q3MJ13 1102 aa8.38□□□□□ -1.07
NCKAP1L-201ENST00000293373 SRRM1Q8IYB3 904 aaKnown RBP8.38□□□□□ -1.07
NCKAP1L-201ENST00000293373 GPRC5DQ9NZD1 345 aa8.38□□□□□ -1.07
NCKAP1L-201ENST00000293373 DBR1Q9UK59 544 aaKnown RBP8.38□□□□□ -1.07
NCKAP1L-201ENST00000293373 PTPN22Q9Y2R2 807 aa8.38□□□□□ -1.07
NCKAP1L-201ENST00000293373 GOLGA8QA0A0J9YX86 632 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 NPHP3-ACAD11A0A0J9YXS1 232 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 GRID2IPA4D2P6 1211 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 GOLGA8OA6NCC3 632 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 GOLGA8NF8WBI6 632 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 INHBAP08476 426 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 TRIM49P0CI25 452 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 TRIM49CP0CI26 452 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 CYP11B2P19099 503 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 PCSK1P29120 753 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 SLC1A1P43005 524 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 CYP27A1Q02318 531 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 GUCY2DQ02846 1103 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 SEC23AQ15436 765 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 C4orf50Q6ZRC1 276 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 NIPA1Q7RTP0 329 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 CNPY4Q8N129 248 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 SPATC1LQ9H0A9 340 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 MED4Q9NPJ6 270 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 ADAMTS1Q9UHI8 967 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 MID2Q9UJV3 735 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 LSM7Q9UK45 103 aaKnown RBP8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 H7C4K7 107 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 PAMP19021 973 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 BASP1P80723 227 aaKnown RBP8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 GLE1Q53GS7 698 aaKnown RBP8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 MAP1SQ66K74 1059 aaPredicted RBP8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 METTL7BQ6UX53 244 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 KIF2CQ99661 725 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 TBC1D12O60347 775 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 CHGBP05060 677 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 CLTAP09496 248 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 CHADLQ6NUI6 762 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 HSPH1Q92598 858 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 SEPT8Q92599 483 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 SCYL1Q96KG9 808 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 SALL3Q9BXA9 1300 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 XRN1Q8IZH2 1706 aaKnown RBP8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 H3BRJ5 948 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 TGFB3P10600 412 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 VPS41P49754 854 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 PGM5Q15124 567 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 STMN2Q93045 179 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 CARNS1A5YM72 827 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 IRX5P78411 483 aaPredicted RBP8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 SKA2Q8WVK7 121 aaPredicted RBP8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 FAM8A1Q9UBU6 413 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 PCDHB7Q9Y5E2 793 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 RIC1Q4ADV7 1423 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 TTI1O43156 1089 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 INPP5BP32019 993 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 CAV1Q03135 178 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 CDO1Q16878 200 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 DHX40Q8IX18 779 aaKnown RBP8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 REM2Q8IYK8 340 aaPredicted RBP8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 PARVAQ9NVD7 372 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 AGAP1Q9UPQ3 857 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 ADM5C9JUS6 153 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 ZFXP17010 805 aaPredicted RBP8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 PDIK1LQ8N165 341 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 ARHGAP18Q8N392 663 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 APEX2Q9UBZ4 518 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 TUBE1Q9UJT0 475 aa8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.37□□□□□ -1.07
NCKAP1L-201ENST00000293373 RAD51Q06609 339 aa8.36□□□□□ -1.07
NCKAP1L-201ENST00000293373 C10orf67Q8IYJ2 551 aa8.36□□□□□ -1.07
NCKAP1L-201ENST00000293373 MED15Q96RN5 788 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms