RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 CACNA2D3Q8IZS8 1091 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 BBS5Q8N3I7 341 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 CCNYL1Q8N7R7 359 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 KCT2Q8NC54 265 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 GAB3Q8WWW8 586 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 AP1M1Q9BXS5 423 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 UCKL1Q9NWZ5 548 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 PPP1R14DQ9NXH3 145 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 FNIP2Q9P278 1114 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 KCNN3Q9UGI6 736 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 USP20Q9Y2K6 914 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 ANGPTL3Q9Y5C1 460 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 PRAG1Q86YV5 1406 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 FANCAO15360 1455 aa8.26□□□□□ -1.09
GPNMB-201ENST00000258733 TSPY2A6NKD2 308 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 HNRNPCL2B2RXH8 293 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 APOL1O14791 398 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 HNRNPCL1O60812 293 aaKnown RBP8.25□□□□□ -1.09
GPNMB-201ENST00000258733 LARGE1O95461 756 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 CYP1A1P04798 512 aaPredicted RBP8.25□□□□□ -1.09
GPNMB-201ENST00000258733 MYL3P08590 195 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 TSPY3P0CV98 308 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 TSPY8P0CW00 308 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 NQO1P15559 274 aaKnown RBP8.25□□□□□ -1.09
GPNMB-201ENST00000258733 RCVRNP35243 200 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 SOX11P35716 441 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 TXKP42681 527 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 CLK3P49761 638 aaKnown RBP8.25□□□□□ -1.09
GPNMB-201ENST00000258733 ATP1A2P50993 1020 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 GPR85P60893 370 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 TSPY1Q01534 308 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 SLFN5Q08AF3 891 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 SQLEQ14534 574 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 SSPNQ14714 243 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 LIN52Q52LA3 116 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 SGO2Q562F6 1265 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 HYIQ5T013 277 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 SPOPLQ6IQ16 392 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 CFAP161Q6P656 301 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 TRPM8Q7Z2W7 1104 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 COLGALT2Q8IYK4 626 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 MLKLQ8NB16 471 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 RNF169Q8NCN4 708 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 LILRB4Q8NHJ6 448 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 FAM149B1Q96BN6 582 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 IQCDQ96DY2 449 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 SLC47A1Q96FL8 570 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 TIMMDC1Q9NPL8 285 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 ANO2Q9NQ90 1003 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 MRPL39Q9NYK5 338 aaKnown RBP8.25□□□□□ -1.09
GPNMB-201ENST00000258733 KLHL3Q9UH77 587 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 DNM3Q9UQ16 869 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 LEMD3Q9Y2U8 911 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 NR2E3Q9Y5X4 410 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 PARD3Q8TEW0 1356 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 TTC21AQ8NDW8 1320 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 PNMA6FA0A0J9YX94 578 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 TRDMT1O14717 391 aaKnown RBP8.25□□□□□ -1.09
GPNMB-201ENST00000258733 C6orf222P0C671 652 aaPredicted RBP8.25□□□□□ -1.09
GPNMB-201ENST00000258733 EPB41P11171 864 aaKnown RBP8.25□□□□□ -1.09
GPNMB-201ENST00000258733 GNAZP19086 355 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 STT3AP46977 705 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 HSPA2P54652 639 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 ATP11AP98196 1134 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 PFKPQ01813 784 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 GUCY1A3Q02108 690 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 R3HDM1Q15032 1099 aaKnown RBP8.25□□□□□ -1.09
GPNMB-201ENST00000258733 ZNF792Q3KQV3 632 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 HSP90AA4PQ58FG1 418 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 C9orf131Q5VYM1 1079 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 PPP4R3AQ6IN85 833 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 MAMDC2Q7Z304 686 aaPredicted RBP8.25□□□□□ -1.09
GPNMB-201ENST00000258733 RASSF3Q86WH2 238 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 ELMOD1Q8N336 334 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 KCNH5Q8NCM2 988 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 OR8H1Q8NGG4 311 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 DNAJC9Q8WXX5 260 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 PRCCQ92733 491 aaPredicted RBP8.25□□□□□ -1.09
GPNMB-201ENST00000258733 ZBED2Q9BTP6 218 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 SLITRK6Q9H5Y7 841 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 ARMC1Q9NVT9 282 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 LARSQ9P2J5 1176 aaKnown RBP8.25□□□□□ -1.09
GPNMB-201ENST00000258733 DACH1Q9UI36 760 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 LRCH1Q9Y2L9 728 aa8.25□□□□□ -1.09
GPNMB-201ENST00000258733 MAFBQ9Y5Q3 323 aaPredicted RBP8.25□□□□□ -1.09
GPNMB-201ENST00000258733 FAM237AA0A1B0GTK4 181 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 CLRN2A0PK11 232 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 B8ZZF3 427 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 CNOT3O75175 753 aaKnown RBP8.24□□□□□ -1.09
GPNMB-201ENST00000258733 TJP3O95049 919 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 SNRPAP09012 282 aaKnown RBP8.24□□□□□ -1.09
GPNMB-201ENST00000258733 L1CAMP32004 1257 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 PTDSS1P48651 473 aaKnown RBP8.24□□□□□ -1.09
GPNMB-201ENST00000258733 RAB15P59190 212 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 NAA20P61599 178 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 DHX9Q08211 1270 aaKnown RBP8.24□□□□□ -1.09
GPNMB-201ENST00000258733 CCNG2Q16589 344 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 CCDC58Q4VC31 144 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 KDM7AQ6ZMT4 941 aa8.24□□□□□ -1.09
GPNMB-201ENST00000258733 AKAP14Q86UN6 197 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms