RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 SLC9A7Q96T83 725 aa25.02■■□□□ 1.6
APOE-201ENST00000252486 TARS2Q9BW92 718 aaKnown RBP25.02■■□□□ 1.6
APOE-201ENST00000252486 KIAA1468Q9P260 1216 aa25.02■■□□□ 1.6
APOE-201ENST00000252486 SLC4A7Q9Y6M7 1214 aa25.02■■□□□ 1.6
APOE-201ENST00000252486 A0A0U1RQF3 1178 aa25.01■■□□□ 1.59
APOE-201ENST00000252486 HNRNPDLO14979 420 aaKnown RBP25.01■■□□□ 1.59
APOE-201ENST00000252486 TOM1L1O75674 476 aa25.01■■□□□ 1.59
APOE-201ENST00000252486 STAG3L1P0CL83 205 aa25.01■■□□□ 1.59
APOE-201ENST00000252486 LIG4P49917 911 aa25.01■■□□□ 1.59
APOE-201ENST00000252486 FAM189BP81408 668 aa25.01■■□□□ 1.59
APOE-201ENST00000252486 STK4Q13043 487 aa25.01■■□□□ 1.59
APOE-201ENST00000252486 SHHQ15465 462 aa25.01■■□□□ 1.59
APOE-201ENST00000252486 BMT2Q1RMZ1 405 aa25.01■■□□□ 1.59
APOE-201ENST00000252486 DCAF4L1Q3SXM0 396 aa25.01■■□□□ 1.59
APOE-201ENST00000252486 SYCP3Q8IZU3 236 aa25.01■■□□□ 1.59
APOE-201ENST00000252486 TRIM6Q9C030 488 aaPredicted RBP25.01■■□□□ 1.59
APOE-201ENST00000252486 PDZD7Q9H5P4 517 aa25.01■■□□□ 1.59
APOE-201ENST00000252486 ELAC1Q9H777 363 aaKnown RBP25.01■■□□□ 1.59
APOE-201ENST00000252486 A0A1W2PPC1 479 aa25■■□□□ 1.59
APOE-201ENST00000252486 ZNF623O75123 536 aa25■■□□□ 1.59
APOE-201ENST00000252486 EDN1P05305 212 aa25■■□□□ 1.59
APOE-201ENST00000252486 C9orf50Q5SZB4 431 aa25■■□□□ 1.59
APOE-201ENST00000252486 ZNF658Q5TYW1 1059 aaPredicted RBP25■■□□□ 1.59
APOE-201ENST00000252486 MPZL3Q6UWV2 235 aa25■■□□□ 1.59
APOE-201ENST00000252486 CHRDL2Q6WN34 429 aa25■■□□□ 1.59
APOE-201ENST00000252486 NPAS4Q8IUM7 802 aa25■■□□□ 1.59
APOE-201ENST00000252486 HACE1Q8IYU2 909 aa25■■□□□ 1.59
APOE-201ENST00000252486 TDHQ8IZJ6 230 aa25■■□□□ 1.59
APOE-201ENST00000252486 MYOCDQ8IZQ8 938 aa25■■□□□ 1.59
APOE-201ENST00000252486 TRIML1Q8N9V2 468 aa25■■□□□ 1.59
APOE-201ENST00000252486 KIAA0895Q8NCT3 520 aa25■■□□□ 1.59
APOE-201ENST00000252486 SYAP1Q96A49 352 aaPredicted RBP25■■□□□ 1.59
APOE-201ENST00000252486 FGFBP2Q9BYJ0 223 aa25■■□□□ 1.59
APOE-201ENST00000252486 PRO3102Q9H379 93 aa25■■□□□ 1.59
APOE-201ENST00000252486 FAM105AQ9NUU6 356 aa25■■□□□ 1.59
APOE-201ENST00000252486 TTLL13PA6NNM8 815 aa24.99■■□□□ 1.59
APOE-201ENST00000252486 PRPF6O94906 941 aaKnown RBP24.99■■□□□ 1.59
APOE-201ENST00000252486 EOMESO95936 686 aa24.99■■□□□ 1.59
APOE-201ENST00000252486 PROZP22891 400 aa24.99■■□□□ 1.59
APOE-201ENST00000252486 SKOR2Q2VWA4 1001 aaPredicted RBP24.99■■□□□ 1.59
APOE-201ENST00000252486 UBXN11Q5T124 520 aa24.99■■□□□ 1.59
APOE-201ENST00000252486 SLFN12LQ6IEE8 588 aa24.99■■□□□ 1.59
APOE-201ENST00000252486 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.99■■□□□ 1.592e-27■■■■■ 28.3
APOE-201ENST00000252486 ECHDC2Q86YB7 292 aa24.99■■□□□ 1.59
APOE-201ENST00000252486 SCFD1Q8WVM8 642 aa24.99■■□□□ 1.59
APOE-201ENST00000252486 ERCC4Q92889 916 aaPredicted RBP24.99■■□□□ 1.59
APOE-201ENST00000252486 PGBD4Q96DM1 585 aa24.99■■□□□ 1.59
APOE-201ENST00000252486 TCHPQ9BT92 498 aa24.99■■□□□ 1.59
APOE-201ENST00000252486 TMEM161AQ9NX61 479 aa24.99■■□□□ 1.59
APOE-201ENST00000252486 CXXC1Q9P0U4 656 aaPredicted RBP24.99■■□□□ 1.59
APOE-201ENST00000252486 LRFN2Q9ULH4 789 aa24.99■■□□□ 1.59
APOE-201ENST00000252486 CLDN3O15551 220 aa24.98■■□□□ 1.59
APOE-201ENST00000252486 MCF2P10911 925 aa24.98■■□□□ 1.59
APOE-201ENST00000252486 PPP1R2P41236 205 aa24.98■■□□□ 1.59
APOE-201ENST00000252486 SNRPFP62306 86 aaKnown RBP24.98■■□□□ 1.59
APOE-201ENST00000252486 KLHL40Q2TBA0 621 aa24.98■■□□□ 1.59
APOE-201ENST00000252486 ZNF568Q3ZCX4 644 aa24.98■■□□□ 1.59
APOE-201ENST00000252486 COBLL1Q53SF7 1204 aa24.98■■□□□ 1.59
APOE-201ENST00000252486 CCDC183Q5T5S1 534 aa24.98■■□□□ 1.59
APOE-201ENST00000252486 GLIS3Q8NEA6 775 aa24.98■■□□□ 1.59
APOE-201ENST00000252486 PTPRHQ9HD43 1115 aa24.98■■□□□ 1.59
APOE-201ENST00000252486 CGNQ9P2M7 1197 aaKnown RBP24.98■■□□□ 1.59
APOE-201ENST00000252486 MAN1B1Q9UKM7 699 aa24.98■■□□□ 1.59
APOE-201ENST00000252486 PCDHB2Q9Y5E7 798 aa24.98■■□□□ 1.59
APOE-201ENST00000252486 NPTXRO95502 500 aa24.97■■□□□ 1.59
APOE-201ENST00000252486 NOLC1Q14978 699 aaKnown RBP eCLIP24.97■■□□□ 1.591e-323■□□□□ 10.1
APOE-201ENST00000252486 KYAT1Q16773 422 aa24.97■■□□□ 1.59
APOE-201ENST00000252486 EEF1DP3Q658K8 133 aa24.97■■□□□ 1.59
APOE-201ENST00000252486 MRPL10Q7Z7H8 261 aaKnown RBP24.97■■□□□ 1.59
APOE-201ENST00000252486 GUF1Q8N442 669 aaKnown RBP24.97■■□□□ 1.59
APOE-201ENST00000252486 GOLGA5Q8TBA6 731 aa24.97■■□□□ 1.59
APOE-201ENST00000252486 RSPH1Q8WYR4 309 aa24.97■■□□□ 1.59
APOE-201ENST00000252486 TOP1MTQ969P6 601 aa24.97■■□□□ 1.59
APOE-201ENST00000252486 GBP3Q9H0R5 595 aa24.97■■□□□ 1.59
APOE-201ENST00000252486 USP20Q9Y2K6 914 aa24.97■■□□□ 1.59
APOE-201ENST00000252486 GDAQ9Y2T3 454 aa24.97■■□□□ 1.59
APOE-201ENST00000252486 PCDHB7Q9Y5E2 793 aa24.97■■□□□ 1.59
APOE-201ENST00000252486 CEP290O15078 2479 aa24.96■■□□□ 1.59
APOE-201ENST00000252486 HOXA2O43364 376 aa24.96■■□□□ 1.59
APOE-201ENST00000252486 ATP2A2P16615 1042 aaKnown RBP24.96■■□□□ 1.59
APOE-201ENST00000252486 MATR3P43243 847 aaKnown RBP eCLIP24.96■■□□□ 1.591e-8■■□□□ 12.6
APOE-201ENST00000252486 DEFB103AP81534 67 aa24.96■■□□□ 1.59
APOE-201ENST00000252486 MCL1Q07820 350 aa24.96■■□□□ 1.59
APOE-201ENST00000252486 KCNA1Q09470 495 aa24.96■■□□□ 1.59
APOE-201ENST00000252486 KNOP1Q1ED39 458 aaKnown RBP24.96■■□□□ 1.59
APOE-201ENST00000252486 HS2ST1Q7LGA3 356 aa24.96■■□□□ 1.59
APOE-201ENST00000252486 CDR2LQ86X02 465 aaPredicted RBP24.96■■□□□ 1.59
APOE-201ENST00000252486 EIF2AQ9BY44 585 aaKnown RBP24.96■■□□□ 1.59
APOE-201ENST00000252486 UBN1Q9NPG3 1134 aa24.96■■□□□ 1.59
APOE-201ENST00000252486 ANKFY1Q9P2R3 1169 aa24.96■■□□□ 1.59
APOE-201ENST00000252486 STYXL1Q9Y6J8 313 aa24.96■■□□□ 1.59
APOE-201ENST00000252486 TTC3P53804 2025 aa24.95■■□□□ 1.58
APOE-201ENST00000252486 GARTP22102 1010 aa24.95■■□□□ 1.58
APOE-201ENST00000252486 STIM1Q13586 685 aa24.95■■□□□ 1.58
APOE-201ENST00000252486 MORC3Q14149 939 aa24.95■■□□□ 1.58
APOE-201ENST00000252486 HSP90AA2PQ14568 343 aaPredicted RBP24.95■■□□□ 1.58
APOE-201ENST00000252486 ZNF598Q86UK7 904 aaKnown RBP24.95■■□□□ 1.58
APOE-201ENST00000252486 CDT1Q9H211 546 aa24.95■■□□□ 1.58
APOE-201ENST00000252486 A0A0B4J269 797 aa24.94■■□□□ 1.58
APOE-201ENST00000252486 ABLIM1O14639 778 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms