RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 CDR1P51861 262 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 STAT2P52630 851 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 AK2P54819 239 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 WTAPQ15007 396 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 LRRC23Q53EV4 343 aaPredicted RBP3.98□□□□□ -1.77
UFM1-201ENST00000239878 TMEM67Q5HYA8 995 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 IFIT1BQ5T764 474 aaKnown RBP3.98□□□□□ -1.77
UFM1-201ENST00000239878 E4F1Q66K89 784 aaPredicted RBP3.98□□□□□ -1.77
UFM1-201ENST00000239878 GADL1Q6ZQY3 521 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 LHFPL2Q6ZUX7 228 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 GPR142Q7Z601 462 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 STRA8Q7Z7C7 330 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 SYNPOQ8N3V7 929 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 ZNF713Q8N859 430 aaPredicted RBP3.98□□□□□ -1.77
UFM1-201ENST00000239878 FANCBQ8NB91 859 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 CHST13Q8NET6 341 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 CHAC2Q8WUX2 184 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 CUL5Q93034 780 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 MFSD3Q96ES6 412 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 JAKMIP1Q96N16 626 aaKnown RBP3.98□□□□□ -1.77
UFM1-201ENST00000239878 SCLT1Q96NL6 688 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 ZKSCAN3Q9BRR0 538 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 TRIM8Q9BZR9 551 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 CAAP1Q9H8G2 361 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 PAPOLBQ9NRJ5 636 aaKnown RBP3.98□□□□□ -1.77
UFM1-201ENST00000239878 HOXC10Q9NYD6 342 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 UBAP1Q9NZ09 502 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 FLRT1Q9NZU1 646 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 POLG2Q9UHN1 485 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 PUF60Q9UHX1 559 aaKnown RBP3.98□□□□□ -1.77
UFM1-201ENST00000239878 MYO6Q9UM54 1294 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 CNPY2Q9Y2B0 182 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 PTPN22Q9Y2R2 807 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 DAAM1Q9Y4D1 1078 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 SAMM50Q9Y512 469 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 SYNGAP1Q96PV0 1343 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 PCNTO95613 3336 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 CCDC69A6NI79 296 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 EBAG9O00559 213 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 ZBTB5O15062 677 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 ADAMTS3O15072 1205 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 GREM1O60565 184 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 COBLO75128 1261 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 RFPL1O75677 317 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 ABLIM3O94929 683 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 PGRP06401 933 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 RBP3P10745 1247 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 MYCLP1P12525 358 aaPredicted RBP3.98□□□□□ -1.77
UFM1-201ENST00000239878 HOXD8P13378 290 aaPredicted RBP3.98□□□□□ -1.77
UFM1-201ENST00000239878 ROR2Q01974 943 aaKnown RBP3.98□□□□□ -1.77
UFM1-201ENST00000239878 PTK2Q05397 1052 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 PKN2Q16513 984 aaKnown RBP3.98□□□□□ -1.77
UFM1-201ENST00000239878 C21orf62-AS1Q17RA5 79 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 GNPTABQ3T906 1256 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 Q4G0T1 1027 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 IL31Q6EBC2 164 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 OTUD7BQ6GQQ9 843 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 OLFML1Q6UWY5 402 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 Q6ZUG5 572 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 ZNF454Q8N9F8 522 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 GPRC5AQ8NFJ5 357 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 SOCS4Q8WXH5 440 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 RHOVQ96L33 236 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 ALS2CR12Q96Q35 445 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 SARGQ9BW04 601 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 NT5C1AQ9BXI3 368 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 TEX13BQ9BXU2 312 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 UBE2OQ9C0C9 1292 aaKnown RBP3.98□□□□□ -1.77
UFM1-201ENST00000239878 BRD8Q9H0E9 1235 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 CBX8Q9HC52 389 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 PAK6Q9NQU5 681 aaPredicted RBP3.98□□□□□ -1.77
UFM1-201ENST00000239878 COL20A1Q9P218 1284 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 SRRDQ9UH36 339 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 GTF2IRD1Q9UHL9 959 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 ABCB11O95342 1321 aa3.98□□□□□ -1.77
UFM1-201ENST00000239878 MEIS2O14770 477 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 IFIT3O14879 490 aaKnown RBP3.97□□□□□ -1.77
UFM1-201ENST00000239878 FAM200BP0CF97 657 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 CYBAP13498 195 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 ZKSCAN1P17029 563 aaPredicted RBP3.97□□□□□ -1.77
UFM1-201ENST00000239878 SLC1A4P43007 532 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 CLCN2P51788 898 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 NEK3P51956 506 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 FOXK2Q01167 660 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 SP3Q02447 781 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 ADCY1Q08828 1119 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 BTG3Q14201 252 aaPredicted RBP3.97□□□□□ -1.77
UFM1-201ENST00000239878 PFKFB3Q16875 520 aaPredicted RBP3.97□□□□□ -1.77
UFM1-201ENST00000239878 QRICH1Q2TAL8 776 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 KBTBD12Q3ZCT8 623 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 ALFQ53S48 1182 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 BEND6Q5SZJ8 279 aaPredicted RBP3.97□□□□□ -1.77
UFM1-201ENST00000239878 BLOC1S2Q6QNY1 142 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 KCTD1Q719H9 257 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 SPATC1Q76KD6 591 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 CHST3Q7LGC8 479 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.97□□□□□ -1.77
UFM1-201ENST00000239878 SDCCAG8Q86SQ7 713 aaPredicted RBP3.97□□□□□ -1.77
UFM1-201ENST00000239878 PALB2Q86YC2 1186 aa3.97□□□□□ -1.77
UFM1-201ENST00000239878 GPR161Q8N6U8 529 aaKnown RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms