RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 HABP4Q5JVS0 413 aaKnown RBP19.66■□□□□ 0.74
CLIP2-201ENST00000223398 SCFD2Q8WU76 684 aa19.66■□□□□ 0.74
CLIP2-201ENST00000223398 TNIP3Q96KP6 325 aa19.66■□□□□ 0.74
CLIP2-201ENST00000223398 EDEM3Q9BZQ6 932 aa19.66■□□□□ 0.74
CLIP2-201ENST00000223398 DDNO94850 711 aaPredicted RBP19.65■□□□□ 0.74
CLIP2-201ENST00000223398 PDIA5Q14554 519 aa19.65■□□□□ 0.74
CLIP2-201ENST00000223398 VPS39Q96JC1 886 aa19.65■□□□□ 0.74
CLIP2-201ENST00000223398 RMDN2Q96LZ7 410 aa19.65■□□□□ 0.74
CLIP2-201ENST00000223398 DGKDQ16760 1214 aa19.65■□□□□ 0.74
CLIP2-201ENST00000223398 KDELC2Q7Z4H8 507 aa19.65■□□□□ 0.74
CLIP2-201ENST00000223398 CHST13Q8NET6 341 aa19.65■□□□□ 0.74
CLIP2-201ENST00000223398 LRGUKQ96M69 825 aa19.65■□□□□ 0.74
CLIP2-201ENST00000223398 FARP1Q9Y4F1 1045 aaPredicted RBP19.65■□□□□ 0.74
CLIP2-201ENST00000223398 RFX5P48382 616 aaPredicted RBP19.65■□□□□ 0.74
CLIP2-201ENST00000223398 YWHAHQ04917 246 aaPredicted RBP19.65■□□□□ 0.74
CLIP2-201ENST00000223398 SEPT5Q99719 369 aaPredicted RBP19.65■□□□□ 0.74
CLIP2-201ENST00000223398 RNF14Q9UBS8 474 aa19.65■□□□□ 0.74
CLIP2-201ENST00000223398 FBXO2Q9UK22 296 aaPredicted RBP19.65■□□□□ 0.74
CLIP2-201ENST00000223398 PGK2P07205 417 aa19.65■□□□□ 0.74
CLIP2-201ENST00000223398 PAMP19021 973 aa19.65■□□□□ 0.74
CLIP2-201ENST00000223398 SERPINB6P35237 376 aa19.65■□□□□ 0.74
CLIP2-201ENST00000223398 TMEM132DQ14C87 1099 aa19.65■□□□□ 0.74
CLIP2-201ENST00000223398 DHX38Q92620 1227 aaKnown RBP19.65■□□□□ 0.74
CLIP2-201ENST00000223398 MXRA8Q9BRK3 442 aa19.65■□□□□ 0.74
CLIP2-201ENST00000223398 RASSF4Q9H2L5 321 aa19.65■□□□□ 0.74
CLIP2-201ENST00000223398 ITGA4P13612 1032 aa19.65■□□□□ 0.74
CLIP2-201ENST00000223398 OR1G1P47890 313 aa19.65■□□□□ 0.74
CLIP2-201ENST00000223398 HP1BP3Q5SSJ5 553 aaPredicted RBP19.65■□□□□ 0.74
CLIP2-201ENST00000223398 FRA10AC1Q70Z53 315 aa19.65■□□□□ 0.74
CLIP2-201ENST00000223398 CDR2LQ86X02 465 aaPredicted RBP19.65■□□□□ 0.74
CLIP2-201ENST00000223398 FGD4Q96M96 766 aa19.65■□□□□ 0.74
CLIP2-201ENST00000223398 LMTK2Q8IWU2 1503 aa19.64■□□□□ 0.74
CLIP2-201ENST00000223398 KLC3Q6P597 504 aa19.64■□□□□ 0.74
CLIP2-201ENST00000223398 GTF3C2Q8WUA4 911 aaPredicted RBP19.64■□□□□ 0.74
CLIP2-201ENST00000223398 MOV10L1Q9BXT6 1211 aaKnown RBP19.64■□□□□ 0.74
CLIP2-201ENST00000223398 RRAGCQ9HB90 399 aa19.64■□□□□ 0.74
CLIP2-201ENST00000223398 RASGRF2O14827 1237 aa19.64■□□□□ 0.73
CLIP2-201ENST00000223398 ANTXR2P58335 489 aa19.64■□□□□ 0.73
CLIP2-201ENST00000223398 F8W8V4 182 aa19.64■□□□□ 0.73
CLIP2-201ENST00000223398 NCK2O43639 380 aa19.64■□□□□ 0.73
CLIP2-201ENST00000223398 ZC2HC1CQ53FD0 456 aaPredicted RBP19.64■□□□□ 0.73
CLIP2-201ENST00000223398 TJP2Q9UDY2 1190 aa19.64■□□□□ 0.73
CLIP2-201ENST00000223398 NFU1Q9UMS0 254 aa19.64■□□□□ 0.73
CLIP2-201ENST00000223398 PRRG1O14668 218 aa19.64■□□□□ 0.73
CLIP2-201ENST00000223398 APBA1Q02410 837 aa19.64■□□□□ 0.73
CLIP2-201ENST00000223398 KYAT1Q16773 422 aa19.64■□□□□ 0.73
CLIP2-201ENST00000223398 KCNH7Q9NS40 1196 aa19.64■□□□□ 0.73
CLIP2-201ENST00000223398 CAP2P40123 477 aa19.63■□□□□ 0.73
CLIP2-201ENST00000223398 PPP2R3CQ969Q6 453 aa19.63■□□□□ 0.73
CLIP2-201ENST00000223398 GLT1D1Q96MS3 346 aa19.63■□□□□ 0.73
CLIP2-201ENST00000223398 ZMYND12Q9H0C1 365 aa19.63■□□□□ 0.73
CLIP2-201ENST00000223398 ERAP1Q9NZ08 941 aa19.63■□□□□ 0.73
CLIP2-201ENST00000223398 NPEPPSP55786 919 aa19.63■□□□□ 0.73
CLIP2-201ENST00000223398 PACSIN2Q9UNF0 486 aaPredicted RBP19.63■□□□□ 0.73
CLIP2-201ENST00000223398 MAP3K21Q5TCX8 1036 aa19.63■□□□□ 0.73
CLIP2-201ENST00000223398 MAP1SQ66K74 1059 aaPredicted RBP19.63■□□□□ 0.73
CLIP2-201ENST00000223398 HEATR6Q6AI08 1181 aaKnown RBP19.63■□□□□ 0.73
CLIP2-201ENST00000223398 RNF180Q86T96 592 aa19.63■□□□□ 0.73
CLIP2-201ENST00000223398 MAGEB2O15479 319 aa19.63■□□□□ 0.73
CLIP2-201ENST00000223398 IRF1P10914 325 aa19.63■□□□□ 0.73
CLIP2-201ENST00000223398 TCF7P36402 384 aaPredicted RBP19.63■□□□□ 0.73
CLIP2-201ENST00000223398 TSGA10IPQ3SY00 556 aa19.63■□□□□ 0.73
CLIP2-201ENST00000223398 DDX53Q86TM3 631 aaKnown RBP19.63■□□□□ 0.73
CLIP2-201ENST00000223398 TXNRD3Q86VQ6 643 aa19.63■□□□□ 0.73
CLIP2-201ENST00000223398 IP6K2Q9UHH9 426 aa19.63■□□□□ 0.73
CLIP2-201ENST00000223398 CPA4Q9UI42 421 aa19.63■□□□□ 0.73
CLIP2-201ENST00000223398 AP3M2P53677 418 aa19.62■□□□□ 0.73
CLIP2-201ENST00000223398 BCAR1P56945 870 aa19.62■□□□□ 0.73
CLIP2-201ENST00000223398 NBPF12Q5TAG4 269 aaPredicted RBP19.62■□□□□ 0.73
CLIP2-201ENST00000223398 TRIM9Q9C026 710 aa19.62■□□□□ 0.73
CLIP2-201ENST00000223398 GBA2Q9HCG7 927 aaPredicted RBP19.62■□□□□ 0.73
CLIP2-201ENST00000223398 NOVA2Q9UNW9 492 aaKnown RBP19.62■□□□□ 0.73
CLIP2-201ENST00000223398 DLC1Q96QB1 1528 aa19.62■□□□□ 0.73
CLIP2-201ENST00000223398 C2CD2LO14523 706 aa19.62■□□□□ 0.73
CLIP2-201ENST00000223398 RBP5P82980 135 aa19.62■□□□□ 0.73
CLIP2-201ENST00000223398 CXCL9Q07325 125 aa19.62■□□□□ 0.73
CLIP2-201ENST00000223398 SRGNP10124 158 aa19.62■□□□□ 0.73
CLIP2-201ENST00000223398 TGFB2P61812 414 aa19.62■□□□□ 0.73
CLIP2-201ENST00000223398 GLB1LQ6UWU2 654 aa19.62■□□□□ 0.73
CLIP2-201ENST00000223398 ANGPTL8Q6UXH0 198 aa19.62■□□□□ 0.73
CLIP2-201ENST00000223398 N4BP2L2Q92802 583 aaPredicted RBP19.62■□□□□ 0.73
CLIP2-201ENST00000223398 CPT1AP50416 773 aa19.62■□□□□ 0.73
CLIP2-201ENST00000223398 CDH6P55285 790 aa19.62■□□□□ 0.73
CLIP2-201ENST00000223398 CDK17Q00537 523 aa19.62■□□□□ 0.73
CLIP2-201ENST00000223398 MED4Q9NPJ6 270 aa19.62■□□□□ 0.73
CLIP2-201ENST00000223398 KLHL11Q9NVR0 708 aa19.62■□□□□ 0.73
CLIP2-201ENST00000223398 TTC26A0AVF1 554 aa19.62■□□□□ 0.73
CLIP2-201ENST00000223398 PAPOLAP51003 745 aaKnown RBP19.62■□□□□ 0.73
CLIP2-201ENST00000223398 DRP2Q13474 957 aa19.62■□□□□ 0.73
CLIP2-201ENST00000223398 TTC39CQ8N584 583 aa19.62■□□□□ 0.73
CLIP2-201ENST00000223398 MIF4GDA9UHW6 222 aaKnown RBP19.61■□□□□ 0.73
CLIP2-201ENST00000223398 NCF2P19878 526 aaPredicted RBP19.61■□□□□ 0.73
CLIP2-201ENST00000223398 CA4P22748 312 aa19.61■□□□□ 0.73
CLIP2-201ENST00000223398 ARL4CP56559 192 aa19.61■□□□□ 0.73
CLIP2-201ENST00000223398 ANO4Q32M45 955 aa19.61■□□□□ 0.73
CLIP2-201ENST00000223398 SZRD1Q7Z422 152 aa19.61■□□□□ 0.73
CLIP2-201ENST00000223398 TRIM42Q8IWZ5 723 aa19.61■□□□□ 0.73
CLIP2-201ENST00000223398 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.61■□□□□ 0.73
CLIP2-201ENST00000223398 AFF4Q9UHB7 1163 aaKnown RBP19.61■□□□□ 0.73
CLIP2-201ENST00000223398 PDXKO00764 312 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms