RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 RABGGTAQ92696 567 aa24.57■■□□□ 1.52
VTI1B-201ENST00000216456 FOXP1Q9H334 677 aaPredicted RBP24.57■■□□□ 1.52
VTI1B-201ENST00000216456 POMKQ9H5K3 350 aa24.57■■□□□ 1.52
VTI1B-201ENST00000216456 TSHZ2Q9NRE2 1034 aa24.57■■□□□ 1.52
VTI1B-201ENST00000216456 CACNG4Q9UBN1 327 aa24.57■■□□□ 1.52
VTI1B-201ENST00000216456 LRRIQ4A6NIV6 560 aa24.56■■□□□ 1.52
VTI1B-201ENST00000216456 NPTXRO95502 500 aa24.56■■□□□ 1.52
VTI1B-201ENST00000216456 COLGALT2Q8IYK4 626 aa24.56■■□□□ 1.52
VTI1B-201ENST00000216456 C4orf32Q8N8J7 132 aa24.56■■□□□ 1.52
VTI1B-201ENST00000216456 SLC22A17Q8WUG5 538 aa24.56■■□□□ 1.52
VTI1B-201ENST00000216456 EDAQ92838 391 aa24.56■■□□□ 1.52
VTI1B-201ENST00000216456 FAM193BQ96PV7 902 aaPredicted RBP24.56■■□□□ 1.52
VTI1B-201ENST00000216456 TUFT1Q9NNX1 390 aa24.56■■□□□ 1.52
VTI1B-201ENST00000216456 KLK14Q9P0G3 267 aa24.56■■□□□ 1.52
VTI1B-201ENST00000216456 FAN1Q9Y2M0 1017 aa24.56■■□□□ 1.52
VTI1B-201ENST00000216456 CNTNAP2Q9UHC6 1331 aa24.56■■□□□ 1.52
VTI1B-201ENST00000216456 FSD2A1L4K1 749 aa24.55■■□□□ 1.52
VTI1B-201ENST00000216456 C2CD2LO14523 706 aa24.55■■□□□ 1.52
VTI1B-201ENST00000216456 EIF5BO60841 1220 aaKnown RBP24.55■■□□□ 1.52
VTI1B-201ENST00000216456 EDN1P05305 212 aa24.55■■□□□ 1.52
VTI1B-201ENST00000216456 MYBP10242 640 aa24.55■■□□□ 1.52
VTI1B-201ENST00000216456 OR1G1P47890 313 aa24.55■■□□□ 1.52
VTI1B-201ENST00000216456 TOB1P50616 345 aaPredicted RBP24.55■■□□□ 1.52
VTI1B-201ENST00000216456 NOSTRINQ8IVI9 506 aa24.55■■□□□ 1.52
VTI1B-201ENST00000216456 FAM184AQ8NB25 1140 aa24.55■■□□□ 1.52
VTI1B-201ENST00000216456 POLR3CQ9BUI4 534 aaPredicted RBP24.55■■□□□ 1.52
VTI1B-201ENST00000216456 CXCL16Q9H2A7 254 aa24.55■■□□□ 1.52
VTI1B-201ENST00000216456 ALDH2P05091 517 aa24.54■■□□□ 1.52
VTI1B-201ENST00000216456 CENPBP07199 599 aaPredicted RBP24.54■■□□□ 1.52
VTI1B-201ENST00000216456 HOXB8P17481 243 aaPredicted RBP24.54■■□□□ 1.52
VTI1B-201ENST00000216456 AXLP30530 894 aa24.54■■□□□ 1.52
VTI1B-201ENST00000216456 ZXDAP98168 799 aa24.54■■□□□ 1.52
VTI1B-201ENST00000216456 POU5F1BQ06416 359 aa24.54■■□□□ 1.52
VTI1B-201ENST00000216456 GSTCDQ8NEC7 633 aa24.54■■□□□ 1.52
VTI1B-201ENST00000216456 B3GALT6Q96L58 329 aa24.54■■□□□ 1.52
VTI1B-201ENST00000216456 ZSCAN31Q96LW9 406 aaPredicted RBP24.54■■□□□ 1.52
VTI1B-201ENST00000216456 ADAM7Q9H2U9 754 aa24.54■■□□□ 1.52
VTI1B-201ENST00000216456 IRAK3Q9Y616 596 aa24.54■■□□□ 1.52
VTI1B-201ENST00000216456 LILRB3O75022 631 aa24.53■■□□□ 1.52
VTI1B-201ENST00000216456 CNPP09543 421 aaKnown RBP24.53■■□□□ 1.52
VTI1B-201ENST00000216456 XRCC6P12956 609 aaKnown RBP eCLIP24.53■■□□□ 1.52
VTI1B-201ENST00000216456 RBM25P49756 843 aaKnown RBP24.53■■□□□ 1.52
VTI1B-201ENST00000216456 HMGN5P82970 282 aaKnown RBP24.53■■□□□ 1.52
VTI1B-201ENST00000216456 GNL2Q13823 731 aaKnown RBP24.53■■□□□ 1.52
VTI1B-201ENST00000216456 PADI6Q6TGC4 694 aa24.53■■□□□ 1.52
VTI1B-201ENST00000216456 TMEM87AQ8NBN3 555 aa24.53■■□□□ 1.52
VTI1B-201ENST00000216456 RSPH1Q8WYR4 309 aa24.53■■□□□ 1.52
VTI1B-201ENST00000216456 KLHL5Q96PQ7 755 aa24.53■■□□□ 1.52
VTI1B-201ENST00000216456 NACC1Q96RE7 527 aa24.53■■□□□ 1.52
VTI1B-201ENST00000216456 TMEM175Q9BSA9 504 aa24.53■■□□□ 1.52
VTI1B-201ENST00000216456 KIFC3Q9BVG8 833 aa24.53■■□□□ 1.52
VTI1B-201ENST00000216456 KANSL3Q9P2N6 904 aa24.53■■□□□ 1.52
VTI1B-201ENST00000216456 DBR1Q9UK59 544 aaKnown RBP24.53■■□□□ 1.52
VTI1B-201ENST00000216456 PCDHB6Q9Y5E3 794 aa24.53■■□□□ 1.52
VTI1B-201ENST00000216456 PP2D1A8MPX8 630 aa24.52■■□□□ 1.52
VTI1B-201ENST00000216456 C2CD4DB7Z1M9 353 aa24.52■■□□□ 1.52
VTI1B-201ENST00000216456 CD2BP2O95400 341 aaKnown RBP24.52■■□□□ 1.52
VTI1B-201ENST00000216456 LIG1P18858 919 aa24.52■■□□□ 1.52
VTI1B-201ENST00000216456 RPA1P27694 616 aa24.52■■□□□ 1.52
VTI1B-201ENST00000216456 DSC1Q08554 894 aa24.52■■□□□ 1.52
VTI1B-201ENST00000216456 TPRNQ4KMQ1 711 aa24.52■■□□□ 1.52
VTI1B-201ENST00000216456 TMC5Q6UXY8 1006 aa24.52■■□□□ 1.52
VTI1B-201ENST00000216456 TRIM67Q6ZTA4 783 aa24.52■■□□□ 1.52
VTI1B-201ENST00000216456 CNNM3Q8NE01 707 aa24.52■■□□□ 1.52
VTI1B-201ENST00000216456 CCDC51Q96ER9 411 aa24.52■■□□□ 1.52
VTI1B-201ENST00000216456 NFKBIZQ9BYH8 718 aa24.52■■□□□ 1.52
VTI1B-201ENST00000216456 TRIM6Q9C030 488 aaPredicted RBP24.52■■□□□ 1.52
VTI1B-201ENST00000216456 SMOC2Q9H3U7 446 aa24.52■■□□□ 1.52
VTI1B-201ENST00000216456 SH2B1Q9NRF2 756 aaPredicted RBP24.52■■□□□ 1.52
VTI1B-201ENST00000216456 A0A1B0GUA9 196 aa24.51■■□□□ 1.51
VTI1B-201ENST00000216456 TMEM221A6NGB7 291 aa24.51■■□□□ 1.51
VTI1B-201ENST00000216456 M0R296 226 aa24.51■■□□□ 1.51
VTI1B-201ENST00000216456 INPPL1O15357 1258 aa24.51■■□□□ 1.51
VTI1B-201ENST00000216456 BMS1Q14692 1282 aaKnown RBP24.51■■□□□ 1.51
VTI1B-201ENST00000216456 IL17AQ16552 155 aa24.51■■□□□ 1.51
VTI1B-201ENST00000216456 PARP2Q9UGN5 583 aa24.51■■□□□ 1.51
VTI1B-201ENST00000216456 ARHGEF35A5YM69 484 aa24.5■■□□□ 1.51
VTI1B-201ENST00000216456 KLRC2P26717 231 aa24.5■■□□□ 1.51
VTI1B-201ENST00000216456 CCT6AP40227 531 aaKnown RBP24.5■■□□□ 1.51
VTI1B-201ENST00000216456 NCBP1Q09161 790 aaKnown RBP24.5■■□□□ 1.51
VTI1B-201ENST00000216456 PCBP1Q15365 356 aaKnown RBP eCLIP24.5■■□□□ 1.51
VTI1B-201ENST00000216456 CDCA2Q69YH5 1023 aaPredicted RBP24.5■■□□□ 1.51
VTI1B-201ENST00000216456 CES5AQ6NT32 575 aa24.5■■□□□ 1.51
VTI1B-201ENST00000216456 SLC27A1Q6PCB7 646 aa24.5■■□□□ 1.51
VTI1B-201ENST00000216456 MCPH1Q8NEM0 835 aa24.5■■□□□ 1.51
VTI1B-201ENST00000216456 PAAF1Q9BRP4 392 aa24.5■■□□□ 1.51
VTI1B-201ENST00000216456 FZD8Q9H461 694 aa24.5■■□□□ 1.51
VTI1B-201ENST00000216456 PDZD7Q9H5P4 517 aa24.5■■□□□ 1.51
VTI1B-201ENST00000216456 UBN1Q9NPG3 1134 aa24.5■■□□□ 1.51
VTI1B-201ENST00000216456 MUC6Q6W4X9 2439 aa24.5■■□□□ 1.51
VTI1B-201ENST00000216456 EFEMP2O95967 443 aa24.49■■□□□ 1.51
VTI1B-201ENST00000216456 SOD2P04179 222 aa24.49■■□□□ 1.51
VTI1B-201ENST00000216456 CYP11B2P19099 503 aa24.49■■□□□ 1.51
VTI1B-201ENST00000216456 U2AF2P26368 475 aaKnown RBP eCLIP24.49■■□□□ 1.51
VTI1B-201ENST00000216456 CDC25AP30304 524 aa24.49■■□□□ 1.51
VTI1B-201ENST00000216456 CLCN4P51793 760 aa24.49■■□□□ 1.51
VTI1B-201ENST00000216456 ITIH3Q06033 890 aa24.49■■□□□ 1.51
VTI1B-201ENST00000216456 PTGDRQ13258 359 aa24.49■■□□□ 1.51
VTI1B-201ENST00000216456 EEF1DP3Q658K8 133 aa24.49■■□□□ 1.51
VTI1B-201ENST00000216456 ERMNQ8TAM6 284 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms