RNA–Protein interactions for RNA: ENSMUST00000108364.7

Sptbn4-204, Transcript of Spectrin beta chain, mousemouse

TSL 1 (best) BASIC

Gene Sptbn4, Length 4,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-204ENSMUST00000108364 NptxrQ99J85 493 aa16.87■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Cdc26Q99JP4 85 aa16.87■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Tlr3Q99MB1 905 aa16.87■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Plagl1Q9JLQ4 704 aa16.87■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Speer3W4VSP1 261 aa16.87■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Foxo6Q70KY4 559 aa16.87■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Dars2Q8BIP0 653 aa16.87■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Scfd1Q8BRF7 639 aaKnown RBP16.87■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 CntrobQ8CB62 887 aa16.87■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Tmco4Q91WU4 631 aa16.87■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Rnf112Q96DY5 654 aa16.87■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Nup153E9Q3G8 1462 aaKnown RBP16.86■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Ets2P15037 468 aa16.86■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Ddx39aQ8VDW0 427 aaKnown RBP16.86■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Nuf2Q99P69 463 aa16.86■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Ddx24Q9ESV0 857 aaKnown RBP16.86■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Slc26a4Q9R155 780 aa16.86■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Gm4841E9QAA8 417 aa16.86■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Rgs9bpQ148R9 237 aa16.86■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Ndufaf2Q59J78 168 aa16.86■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Q80ZQ3 298 aa16.86■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 CenpuQ8C4M7 410 aa16.86■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Tph2Q8CGV2 488 aa16.86■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Gbp6A0A0G2JDV3 611 aa16.86■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Gm43302L7N1X8 611 aa16.86■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 CatspereP0DP43 985 aa16.86■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Scp2P32020 547 aaKnown RBP16.86■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Ece1Q4PZA2 769 aa16.86■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Fbxw10Q5SUS0 1030 aa16.86■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Ptk6Q64434 451 aa16.86■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Pcdhb2Q91Y00 799 aa16.86■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Ttc1Q91Z38 292 aa16.86■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Tspan17Q9D7W4 270 aa16.86■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Gadd45gQ9Z111 159 aa16.86■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Zfyve9A2A8R0 1397 aa16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Speer4f2E9Q366 295 aa16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 E2f8Q58FA4 860 aa16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Atp4aQ64436 1033 aa16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Ppp2r5aQ6PD03 486 aa16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Actr5Q80US4 605 aaKnown RBP16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Acat1Q8QZT1 424 aa16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Defb15Q8R2I5 79 aa16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Scrn2Q8VCA8 425 aa16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Nsmce3Q9CPR8 279 aa16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Mms19Q9D071 1031 aa16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Ap2b1Q9DBG3 937 aa16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Prkab1Q9R078 270 aa16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Hao1Q9WU19 370 aa16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Ppef2O35385 757 aa16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Timm44O35857 452 aa16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Kcna3P16390 528 aa16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Mark3Q03141 753 aa16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Plekhf1Q3TB82 279 aa16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Akap4Q60662 849 aa16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 IqceQ6PCQ0 778 aa16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Psip1Q99JF8 528 aaKnown RBP16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Chd4Q6PDQ2 1915 aaKnown RBP16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Gm20721E9Q2U8 318 aa16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Sgsm1Q8BPQ7 1093 aa16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Ube2q2Q8K2Z8 378 aa16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Sf3b3Q921M3 1217 aaKnown RBP16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Taf11Q99JX1 211 aa16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 4930519G04RikQ9CPT7 205 aa16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Nsmce1Q9D720 266 aa16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Stk4Q9JI11 487 aa16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Capn15Q9JLG8 1095 aa16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Krt27Q9Z320 448 aa16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Kcnh4A2A5F7 1018 aa16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Klhl38Q8BSF5 581 aa16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Ccdc65Q8VHI7 493 aa16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Afg3l1Q920A7 789 aaKnown RBP16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Mrpl11Q9CQF0 192 aaKnown RBP16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 PpihQ9D868 188 aa16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Slc5a4aQ9ET37 656 aa16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Edf1Q9JMG1 148 aaKnown RBP16.85■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Scgb2b7D3YYY1 112 aa16.84■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 AarsQ8BGQ7 968 aa16.84■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Scfd2Q8BTY8 684 aa16.84■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 YarsQ91WQ3 528 aaKnown RBP16.84■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Rev1Q920Q2 1249 aa16.84■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Tpd52l2Q9CYZ2 220 aaKnown RBP16.84■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Guca2bO09051 106 aa16.84■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Lrrc23O35125 340 aa16.84■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Lmntd2Q0VET5 664 aa16.84■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Rnf10Q3UIW5 804 aa16.84■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Fam92bQ3V2J0 292 aa16.84■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Scnn1aQ61180 699 aa16.84■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Atl2Q6PA06 583 aa16.84■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Tmem117Q8BH18 514 aa16.84■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Rapgef5Q8C0Q9 814 aa16.84■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Ccdc22Q9JIG7 627 aa16.84■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Ssc5dQ8BV57 1371 aa16.84■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Usp31E9Q6Y8 1344 aa16.84■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Lrrc63A6H694 637 aa16.84■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Gm379J3QQ19 296 aa16.84■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 EsrraO08580 422 aa16.84■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 PtenO08586 403 aa16.84■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 KitP05532 979 aa16.84■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Spag6Q3V0U9 509 aa16.84■□□□□ 0.29
Sptbn4-204ENSMUST00000108364 Reep2Q8VCD6 254 aa16.84■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 37.8 ms