RNA–Protein interactions for RNA: ENSMUST00000100497.10

Actb-201, Transcript of Actin, cytoplasmic 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Actb, Length 1,920 nt, Biotype protein coding, Subcellular localisation Axon, Cell leading edge, Cytoplasm, Cytosol, Dendrite, Endoplasmic reticulum, Exosome, Growth cone, Lamellipodium, Perinuclear, Ribosome, Somatodendritic compartment .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Actb-201ENSMUST00000100497 Astn1Q61137 1302 aa13.21□□□□□ -0.3
Actb-201ENSMUST00000100497 PhipQ8VDD9 1821 aaKnown RBP13.2□□□□□ -0.3
Actb-201ENSMUST00000100497 Rasal2E9PW37 1286 aa13.2□□□□□ -0.3
Actb-201ENSMUST00000100497 Gm3127E9Q9P5 263 aa13.2□□□□□ -0.3
Actb-201ENSMUST00000100497 Gm3453K7N724 263 aa13.2□□□□□ -0.3
Actb-201ENSMUST00000100497 Cd44P15379 778 aa13.2□□□□□ -0.3
Actb-201ENSMUST00000100497 Map2k1P31938 393 aa13.2□□□□□ -0.3
Actb-201ENSMUST00000100497 Wfs1P56695 890 aa13.2□□□□□ -0.3
Actb-201ENSMUST00000100497 Surf6P70279 355 aaKnown RBP13.2□□□□□ -0.3
Actb-201ENSMUST00000100497 Grm1P97772 1199 aa13.2□□□□□ -0.3
Actb-201ENSMUST00000100497 KhsrpQ3U0V1 748 aaKnown RBP13.2□□□□□ -0.3
Actb-201ENSMUST00000100497 Clul1Q3ZRW6 464 aa13.2□□□□□ -0.3
Actb-201ENSMUST00000100497 Krt74Q6IFZ9 495 aa13.2□□□□□ -0.3
Actb-201ENSMUST00000100497 Frmd5Q6P5H6 517 aa13.2□□□□□ -0.3
Actb-201ENSMUST00000100497 Q8BGC1 442 aa13.2□□□□□ -0.3
Actb-201ENSMUST00000100497 Apol9bQ8C7I4 310 aa13.2□□□□□ -0.3
Actb-201ENSMUST00000100497 Myef2Q8C854 591 aaKnown RBP13.2□□□□□ -0.3
Actb-201ENSMUST00000100497 Fbxo43Q8CDI2 640 aa13.2□□□□□ -0.3
Actb-201ENSMUST00000100497 Matr3Q8K310 846 aaKnown RBP13.2□□□□□ -0.3
Actb-201ENSMUST00000100497 Scrn2Q8VCA8 425 aa13.2□□□□□ -0.3
Actb-201ENSMUST00000100497 Apol9aQ8VDU3 310 aa13.2□□□□□ -0.3
Actb-201ENSMUST00000100497 Prc1Q99K43 603 aaKnown RBP13.2□□□□□ -0.3
Actb-201ENSMUST00000100497 Tcirg1Q9JHF5 834 aa13.2□□□□□ -0.3
Actb-201ENSMUST00000100497 Stk4Q9JI11 487 aa13.2□□□□□ -0.3
Actb-201ENSMUST00000100497 Golga5Q9QYE6 729 aa13.2□□□□□ -0.3
Actb-201ENSMUST00000100497 EcsitQ9QZH6 435 aa13.2□□□□□ -0.3
Actb-201ENSMUST00000100497 Arhgef10Q8C033 1345 aa13.2□□□□□ -0.3
Actb-201ENSMUST00000100497 Pappa2E9PZ87 1789 aa13.2□□□□□ -0.3
Actb-201ENSMUST00000100497 Fbf1A2A870 1173 aa13.19□□□□□ -0.3
Actb-201ENSMUST00000100497 Slc35g2D3YVE8 412 aa13.19□□□□□ -0.3
Actb-201ENSMUST00000100497 Heatr4E9Q357 955 aa13.19□□□□□ -0.3
Actb-201ENSMUST00000100497 CaluO35887 315 aa13.19□□□□□ -0.3
Actb-201ENSMUST00000100497 TyrobpO54885 114 aa13.19□□□□□ -0.3
Actb-201ENSMUST00000100497 Eps15P42567 897 aa13.19□□□□□ -0.3
Actb-201ENSMUST00000100497 PltpP55065 493 aa13.19□□□□□ -0.3
Actb-201ENSMUST00000100497 Znf367Q0VDT2 340 aa13.19□□□□□ -0.3
Actb-201ENSMUST00000100497 Rnf40Q3U319 1001 aa13.19□□□□□ -0.3
Actb-201ENSMUST00000100497 Ublcp1Q8BGR9 318 aa13.19□□□□□ -0.3
Actb-201ENSMUST00000100497 Gpt2Q8BGT5 522 aa13.19□□□□□ -0.3
Actb-201ENSMUST00000100497 Rassf2Q8BMS9 326 aa13.19□□□□□ -0.3
Actb-201ENSMUST00000100497 Efl1Q8C0D5 1127 aa13.19□□□□□ -0.3
Actb-201ENSMUST00000100497 Sulf1Q8K007 870 aa13.19□□□□□ -0.3
Actb-201ENSMUST00000100497 Atp2a1Q8R429 994 aa13.19□□□□□ -0.3
Actb-201ENSMUST00000100497 Eif2ak3Q9Z2B5 1114 aa13.19□□□□□ -0.3
Actb-201ENSMUST00000100497 4933406M09RikG3XA12 479 aa13.19□□□□□ -0.3
Actb-201ENSMUST00000100497 Usp4P35123 962 aa13.19□□□□□ -0.3
Actb-201ENSMUST00000100497 Lpar1P61793 364 aa13.19□□□□□ -0.3
Actb-201ENSMUST00000100497 NfiaQ02780 532 aa13.19□□□□□ -0.3
Actb-201ENSMUST00000100497 Eepd1Q3TGW2 569 aa13.19□□□□□ -0.3
Actb-201ENSMUST00000100497 R3hdm4Q4VBF2 262 aa13.19□□□□□ -0.3
Actb-201ENSMUST00000100497 Zcchc2Q69ZB8 1166 aa13.19□□□□□ -0.3
Actb-201ENSMUST00000100497 Anks6Q6GQX6 883 aa13.19□□□□□ -0.3
Actb-201ENSMUST00000100497 AdalQ80SY6 360 aa13.19□□□□□ -0.3
Actb-201ENSMUST00000100497 Bcas3Q8CCN5 928 aa13.19□□□□□ -0.3
Actb-201ENSMUST00000100497 Ago2Q8CJG0 860 aaKnown RBP13.19□□□□□ -0.3
Actb-201ENSMUST00000100497 D630039A03RikQ8K0M7 236 aa13.19□□□□□ -0.3
Actb-201ENSMUST00000100497 IvdQ9JHI5 424 aa13.19□□□□□ -0.3
Actb-201ENSMUST00000100497 Sv2aQ9JIS5 742 aa13.19□□□□□ -0.3
Actb-201ENSMUST00000100497 Zgrf1Q0VGT4 1863 aa13.18□□□□□ -0.3
Actb-201ENSMUST00000100497 1700017N19RikA0A087WPJ1 469 aa13.18□□□□□ -0.3
Actb-201ENSMUST00000100497 AunipE9Q6Z5 340 aa13.18□□□□□ -0.3
Actb-201ENSMUST00000100497 Vmn2r77L7N2B7 854 aa13.18□□□□□ -0.3
Actb-201ENSMUST00000100497 Cetn1P41209 172 aa13.18□□□□□ -0.3
Actb-201ENSMUST00000100497 Evi5P97366 809 aa13.18□□□□□ -0.3
Actb-201ENSMUST00000100497 Atp11aP98197 1187 aa13.18□□□□□ -0.3
Actb-201ENSMUST00000100497 Tspyl3Q3UYP3 334 aa13.18□□□□□ -0.3
Actb-201ENSMUST00000100497 Gm10392Q3V3I3 114 aa13.18□□□□□ -0.3
Actb-201ENSMUST00000100497 Git1Q68FF6 770 aa13.18□□□□□ -0.3
Actb-201ENSMUST00000100497 Snx19Q6P4T1 997 aa13.18□□□□□ -0.3
Actb-201ENSMUST00000100497 Cyfip1Q7TMB8 1253 aa13.18□□□□□ -0.3
Actb-201ENSMUST00000100497 Ece2Q80Z60 881 aa13.18□□□□□ -0.3
Actb-201ENSMUST00000100497 Trim6Q8BGE7 488 aa13.18□□□□□ -0.3
Actb-201ENSMUST00000100497 Rint1Q8BZ36 792 aa13.18□□□□□ -0.3
Actb-201ENSMUST00000100497 Commd10Q8JZY2 202 aa13.18□□□□□ -0.3
Actb-201ENSMUST00000100497 Tbx22Q8K402 517 aa13.18□□□□□ -0.3
Actb-201ENSMUST00000100497 Upb1Q8VC97 393 aa13.18□□□□□ -0.3
Actb-201ENSMUST00000100497 Cst12Q9DAN8 128 aa13.18□□□□□ -0.3
Actb-201ENSMUST00000100497 PtenO08586 403 aa13.17□□□□□ -0.3
Actb-201ENSMUST00000100497 Mdm4O35618 489 aa13.17□□□□□ -0.3
Actb-201ENSMUST00000100497 Tnni3P48787 211 aa13.17□□□□□ -0.3
Actb-201ENSMUST00000100497 Casp7P97864 303 aa13.17□□□□□ -0.3
Actb-201ENSMUST00000100497 Gprin1Q3UNH4 932 aa13.17□□□□□ -0.3
Actb-201ENSMUST00000100497 EsrrbQ61539 433 aa13.17□□□□□ -0.3
Actb-201ENSMUST00000100497 Sh3gl2Q62420 352 aa13.17□□□□□ -0.3
Actb-201ENSMUST00000100497 Rnf139Q7TMV1 668 aa13.17□□□□□ -0.3
Actb-201ENSMUST00000100497 Cct8l1Q80YT3 562 aa13.17□□□□□ -0.3
Actb-201ENSMUST00000100497 Fbxo44Q8BK26 255 aa13.17□□□□□ -0.3
Actb-201ENSMUST00000100497 Ccdc134Q8C7V8 229 aa13.17□□□□□ -0.3
Actb-201ENSMUST00000100497 Rhobtb2Q91V93 728 aa13.17□□□□□ -0.3
Actb-201ENSMUST00000100497 Nmrk1Q91W63 195 aa13.17□□□□□ -0.3
Actb-201ENSMUST00000100497 Vwa5aQ99KC8 793 aaKnown RBP13.17□□□□□ -0.3
Actb-201ENSMUST00000100497 Stx17Q9D0I4 301 aa13.17□□□□□ -0.3
Actb-201ENSMUST00000100497 Tmem206Q9D771 350 aa13.17□□□□□ -0.3
Actb-201ENSMUST00000100497 Xab2Q9DCD2 855 aaKnown RBP13.17□□□□□ -0.3
Actb-201ENSMUST00000100497 Tacc3Q9JJ11 631 aa13.17□□□□□ -0.3
Actb-201ENSMUST00000100497 Slc26a3Q9WVC8 757 aa13.17□□□□□ -0.3
Actb-201ENSMUST00000100497 Grk1Q9WVL4 564 aa13.17□□□□□ -0.3
Actb-201ENSMUST00000100497 Kcnd2Q9Z0V2 630 aa13.17□□□□□ -0.3
Actb-201ENSMUST00000100497 Cog1Q9Z160 980 aa13.17□□□□□ -0.3
Actb-201ENSMUST00000100497 Pds5aQ6A026 1332 aa13.17□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 49.8 ms