RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Ddah1Q9CWS0 285 aa13.36□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Mrps25Q9D125 171 aaKnown RBP13.36□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Drap1Q9D6N5 205 aa13.36□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Extl1Q9JKV7 669 aa13.36□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Gde1Q9JL56 331 aa13.36□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Acot9Q9R0X4 439 aaKnown RBP13.36□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Hebp1Q9R257 190 aa13.36□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Cntnap4Q99P47 1310 aa13.36□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Gm4985A2ALC6 410 aa13.35□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Heatr4E9Q357 955 aa13.35□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Plekha5E9Q6H8 1269 aa13.35□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Gm10134F6ZQC6 126 aa13.35□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 TertO70372 1122 aa13.35□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 NrlP54846 237 aa13.35□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Mcm6P97311 821 aa13.35□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Tatdn3Q3U1C6 294 aa13.35□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 MaeaQ4VC33 396 aa13.35□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Cd37Q61470 281 aa13.35□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Znf653Q6YND2 615 aa13.35□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Dusp9Q7TNL7 452 aa13.35□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Mapk15Q80Y86 549 aa13.35□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Pan2Q8BGF7 1200 aaKnown RBP13.35□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Abi1Q8CBW3 481 aa13.35□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Znf467Q8JZL0 594 aa13.35□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Dnajc28Q8VCE1 385 aa13.35□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Washc1Q8VDD8 475 aa13.35□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Olfr1352Q8VGX5 309 aa13.35□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Q91WD4 421 aa13.35□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Fuca1Q99LJ1 452 aa13.35□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Spg21Q9CQC8 308 aa13.35□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 PpihQ9D868 188 aa13.35□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Trhr2Q9ERT2 382 aa13.35□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Cntnap5aQ0V8T9 1304 aa13.35□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Col12a1Q60847 3120 aa13.35□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Vps13aQ5H8C4 3166 aa13.34□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Igkv17-121A0A0G2JFA8 117 aa13.34□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Lrrc38A2VDH3 298 aa13.34□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Zfp472B0V2W5 534 aa13.34□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Grik3B1AS29 919 aa13.34□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 BC049352E9Q2Z6 85 aa13.34□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Exoc4O35382 975 aa13.34□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Orc4O88708 433 aa13.34□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 mt-Co3P00416 261 aa13.34□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 P01734 135 aa13.34□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Cyp21P03940 487 aa13.34□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Ccnd2P30280 289 aa13.34□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Paxbp1P58501 919 aa13.34□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Rsad1Q5SUV1 442 aa13.34□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 AlcamQ61490 583 aa13.34□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Rint1Q8BZ36 792 aa13.34□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Gpc5Q8CAL5 572 aa13.34□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Ftsj1Q8CBC7 324 aa13.34□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Apol10aQ8CCA5 318 aa13.34□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Pak2Q8CIN4 524 aa13.34□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 DarsQ922B2 501 aaKnown RBP13.34□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Pstpip2Q99M15 334 aa13.34□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Clec1bQ9JL99 229 aa13.34□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Git2Q9JLQ2 708 aa13.34□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 GsdmeQ9Z2D3 512 aa13.34□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Umodl1Q5DID3 1319 aa13.34□□□□□ -0.27
Ccdc28a-202ENSMUST00000080860 Gm43638A0A0J9YU36 694 aa13.33□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 Gm4756A0A140LIS8 335 aa13.33□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 Zfp984A2A7A2 547 aa13.33□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 Gm21973F6WEZ7 68 aa13.33□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 Gm17535J3KMR8 224 aa13.33□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 Gm16427J3QN52 483 aa13.33□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 Mdm4O35618 489 aa13.33□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 Entpd2O55026 495 aa13.33□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 Dpep1P31428 410 aa13.33□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 Defa-rs12P50716 91 aa13.33□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 EnahQ03173 802 aa13.33□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 March5Q3KNM2 278 aa13.33□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 Rexo1Q7TT28 1213 aa13.33□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 Nol12Q8BG17 217 aa13.33□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 Tmem260Q8BMD6 703 aa13.33□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 Kif2bQ8C0N1 668 aa13.33□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 Tmem161bQ8C2L6 487 aa13.33□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 Rbm12Q8R4X3 992 aaKnown RBP13.33□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 Rpap2Q8VC34 614 aa13.33□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 Uhrf1Q8VDF2 782 aaKnown RBP13.33□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 Stk38Q91VJ4 465 aa13.33□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 Krt82Q99M74 516 aa13.33□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 Dnajb4Q9D832 337 aa13.33□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 Rab13Q9DD03 202 aa13.33□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 Olig1Q9JKN5 260 aa13.33□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 Gm28036V9GXJ1 658 aa13.33□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 Pds5aQ6A026 1332 aa13.33□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 TectaO08523 2155 aa13.32□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 Chd7A2AJK6 2986 aaKnown RBP13.32□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 Mki67E9PVX6 3177 aaKnown RBP13.32□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 P01878 344 aa13.32□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 P4hbP09103 509 aaKnown RBP13.32□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 Nudt1P53368 156 aa13.32□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 Trim43cP86449 446 aa13.32□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 Bmp1P98063 991 aa13.32□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 Adcy6Q01341 1165 aa13.32□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 Myadml2Q08AU7 307 aa13.32□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 Edem3Q2HXL6 931 aa13.32□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 Znf354cQ571J5 560 aa13.32□□□□□ -0.28
Ccdc28a-202ENSMUST00000080860 Asap3Q5U464 904 aa13.32□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 49 ms