RNA–Protein interactions for RNA: snR190

snR190, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR190, Length 190 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR190snR190 YIL012WP40551 113 aa0.47□□□□□ -2.33
snR190snR190 SYS1P41544 203 aa0.47□□□□□ -2.33
snR190snR190 TAF6P53040 516 aa0.47□□□□□ -2.33
snR190snR190 LIF1P53150 421 aa0.47□□□□□ -2.33
snR190snR190 RPL26BP53221 127 aaKnown RBP0.47□□□□□ -2.33
snR190snR190 YGR266WP53326 701 aa0.47□□□□□ -2.33
snR190snR190 ALG9P53868 555 aaKnown RBP0.47□□□□□ -2.33
snR190snR190 YNL143CP53908 130 aa0.47□□□□□ -2.33
snR190snR190 YMR166CQ03829 368 aa0.47□□□□□ -2.33
snR190snR190 RVB1Q03940 463 aaKnown RBP0.47□□□□□ -2.33
snR190snR190 RDS3Q06835 107 aaPredicted RBP0.47□□□□□ -2.33
snR190snR190 TY3A-GQ12173 290 aa0.47□□□□□ -2.33
snR190snR190 SKS1Q12505 502 aa0.47□□□□□ -2.33
snR190snR190 LAG2Q92325 660 aa0.47□□□□□ -2.33
snR190snR190 TY3A-IQ99219 290 aa0.47□□□□□ -2.33
snR190snR190 YCR025CP25352 136 aa0.46□□□□□ -2.34
snR190snR190 ACB1P31787 87 aa0.46□□□□□ -2.34
snR190snR190 MRPL3P36516 390 aa0.46□□□□□ -2.34
snR190snR190 TRM7P38238 310 aaKnown RBP0.46□□□□□ -2.34
snR190snR190 YBR062CP38239 180 aa0.46□□□□□ -2.34
snR190snR190 RXT2P38255 430 aa0.46□□□□□ -2.34
snR190snR190 JEM1P40358 645 aa0.46□□□□□ -2.34
snR190snR190 YFL064CP43540 174 aa0.46□□□□□ -2.34
snR190snR190 YFL040WP43562 540 aa0.46□□□□□ -2.34
snR190snR190 YJR141WP47172 347 aaPredicted RBP0.46□□□□□ -2.34
snR190snR190 YJR146WP47174 117 aa0.46□□□□□ -2.34
snR190snR190 RSM27P53305 110 aa0.46□□□□□ -2.34
snR190snR190 BIO4P53630 237 aa0.46□□□□□ -2.34
snR190snR190 YNL146WP53906 100 aa0.46□□□□□ -2.34
snR190snR190 EOS1P53938 366 aa0.46□□□□□ -2.34
snR190snR190 MYO5Q04439 1219 aaKnown RBP0.46□□□□□ -2.34
snR190snR190 NNT1Q05874 261 aa0.46□□□□□ -2.34
snR190snR190 SUE1Q06524 206 aa0.46□□□□□ -2.34
snR190snR190 YPL278CQ08990 100 aa0.46□□□□□ -2.34
snR190snR190 YHR086W-AQ3E746 53 aa0.46□□□□□ -2.34
snR190snR190 NBL1Q3E7Y6 73 aa0.46□□□□□ -2.34
snR190snR190 DPM1P14020 267 aaKnown RBP0.45□□□□□ -2.34
snR190snR190 IFM1P25038 676 aa0.45□□□□□ -2.34
snR190snR190 IMP1P28627 190 aa0.45□□□□□ -2.34
snR190snR190 VMA5P31412 392 aaKnown RBP0.45□□□□□ -2.34
snR190snR190 GCG1P32656 232 aaKnown RBP0.45□□□□□ -2.34
snR190snR190 CDC13P32797 924 aaKnown RBP0.45□□□□□ -2.34
snR190snR190 AVT6P40074 448 aa0.45□□□□□ -2.34
snR190snR190 PRP24P49960 444 aaKnown RBP0.45□□□□□ -2.34
snR190snR190 MND1P53102 219 aa0.45□□□□□ -2.34
snR190snR190 YGL114WP53134 725 aa0.45□□□□□ -2.34
snR190snR190 YGR016WP53209 190 aa0.45□□□□□ -2.34
snR190snR190 IRC4Q03036 179 aa0.45□□□□□ -2.34
snR190snR190 TVP15Q03860 143 aa0.45□□□□□ -2.34
snR190snR190 SNX41Q04053 625 aa0.45□□□□□ -2.34
snR190snR190 FCF1Q05498 189 aaPredicted RBP0.45□□□□□ -2.34
snR190snR190 DCR2Q05924 578 aa0.45□□□□□ -2.34
snR190snR190 BUR2Q05949 395 aa0.45□□□□□ -2.34
snR190snR190 SPO77Q06134 477 aa0.45□□□□□ -2.34
snR190snR190 YLR446WQ06204 433 aa0.45□□□□□ -2.34
snR190snR190 DBP9Q06218 594 aaKnown RBP0.45□□□□□ -2.34
snR190snR190 CTS2Q06350 511 aa0.45□□□□□ -2.34
snR190snR190 YDL144CQ07589 356 aa0.45□□□□□ -2.34
snR190snR190 RTC5Q12108 567 aaKnown RBP0.45□□□□□ -2.34
snR190snR190 YDR262WQ12331 272 aa0.45□□□□□ -2.34
snR190snR190 UTP23Q12339 254 aaKnown RBP0.45□□□□□ -2.34
snR190snR190 FRE6Q12473 712 aa0.45□□□□□ -2.34
snR190snR190 AGC1Q12482 902 aa0.45□□□□□ -2.34
snR190snR190 DCP1Q12517 231 aaPredicted RBP0.45□□□□□ -2.34
snR190snR190 PAN1P32521 1480 aa0.45□□□□□ -2.34
snR190snR190 GAL7P08431 366 aa0.44□□□□□ -2.34
snR190snR190 TFS1P14306 219 aa0.44□□□□□ -2.34
snR190snR190 COY1P34237 679 aa0.44□□□□□ -2.34
snR190snR190 TPO5P36029 618 aa0.44□□□□□ -2.34
snR190snR190 MCH2P36032 473 aa0.44□□□□□ -2.34
snR190snR190 MBA1P38300 278 aa0.44□□□□□ -2.34
snR190snR190 GRE3P38715 327 aaKnown RBP RIP-Chip data0.44□□□□□ -2.34not detected
snR190snR190 YHR035WP38769 630 aa0.44□□□□□ -2.34
snR190snR190 YHR045WP38775 560 aa0.44□□□□□ -2.34
snR190snR190 SUR2P38992 349 aa0.44□□□□□ -2.34
snR190snR190 VAB2P40003 282 aa0.44□□□□□ -2.34
snR190snR190 KRE29P40026 464 aa0.44□□□□□ -2.34
snR190snR190 FCY21P40039 528 aa0.44□□□□□ -2.34
snR190snR190 INA22P40576 216 aa0.44□□□□□ -2.34
snR190snR190 YFR054CP43622 192 aa0.44□□□□□ -2.34
snR190snR190 YJL027CP47063 138 aaPredicted RBP0.44□□□□□ -2.34
snR190snR190 OST3P48439 350 aa0.44□□□□□ -2.34
snR190snR190 TPN1P53099 579 aa0.44□□□□□ -2.34
snR190snR190 CUE3P53137 624 aaKnown RBP0.44□□□□□ -2.34
snR190snR190 YGR168CP53293 376 aa0.44□□□□□ -2.34
snR190snR190 GRH1Q04410 372 aaKnown RBP0.44□□□□□ -2.34
snR190snR190 YLL007CQ07799 665 aa0.44□□□□□ -2.34
snR190snR190 ATG5Q12380 294 aa0.44□□□□□ -2.34
snR190snR190 NUP157P40064 1391 aaKnown RBP0.44□□□□□ -2.34
snR190snR190 TDH1P00360 332 aaKnown RBP0.43□□□□□ -2.34
snR190snR190 TAL1P15019 335 aaKnown RBP0.43□□□□□ -2.34
snR190snR190 OSM1P21375 501 aaKnown RBP0.43□□□□□ -2.34
snR190snR190 RPL16BP26785 198 aaKnown RBP0.43□□□□□ -2.34
snR190snR190 ZRT1P32804 376 aa0.43□□□□□ -2.34
snR190snR190 IMP3P32899 183 aaPredicted RBP0.43□□□□□ -2.34
snR190snR190 LAS1P36146 502 aaPredicted RBP0.43□□□□□ -2.34
snR190snR190 YPC1P38298 316 aa0.43□□□□□ -2.34
snR190snR190 SPL2P38839 148 aa0.43□□□□□ -2.34
snR190snR190 CAJ1P39101 391 aa0.43□□□□□ -2.34
snR190snR190 MRPL49P40858 161 aaPredicted RBP0.43□□□□□ -2.34
Retrieved 100 of 5,963 RNA–protein pairs in 39.5 ms