RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeastyeast

Gene SHR5, Length 714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR5YOL110W NFS1P25374 497 aa12.93□□□□□ -0.34
SHR5YOL110W ATS1P31386 333 aa12.93□□□□□ -0.34
SHR5YOL110W PUB1P32588 453 aaKnown RBP RIP-Chip data12.93□□□□□ -0.34 RIP-Chip
SHR5YOL110W MTC2P34246 357 aa12.93□□□□□ -0.34
SHR5YOL110W UTP11P34247 250 aaPredicted RBP12.93□□□□□ -0.34
SHR5YOL110W AMN1P38285 549 aaPredicted RBP12.93□□□□□ -0.34
SHR5YOL110W RFC4P40339 323 aaKnown RBP12.93□□□□□ -0.34
SHR5YOL110W APM1Q00776 475 aaPredicted RBP12.93□□□□□ -0.34
SHR5YOL110W VBA4Q04602 768 aaKnown RBP12.93□□□□□ -0.34
SHR5YOL110W AIM6Q07716 390 aa12.93□□□□□ -0.34
SHR5YOL110W NIP7Q08962 181 aaKnown RBP12.93□□□□□ -0.34
SHR5YOL110W YDL176WQ12027 708 aa12.93□□□□□ -0.34
SHR5YOL110W Q0144Q9ZZW2 109 aa12.93□□□□□ -0.34
SHR5YOL110W STE50P25344 346 aa12.92□□□□□ -0.34
SHR5YOL110W JLP2P40206 208 aa12.92□□□□□ -0.34
SHR5YOL110W MNN5P46982 586 aa12.92□□□□□ -0.34
SHR5YOL110W GRE1Q08969 168 aa12.92□□□□□ -0.34
SHR5YOL110W IES3Q12345 250 aa12.92□□□□□ -0.34
SHR5YOL110W MDH2P22133 377 aa12.91□□□□□ -0.34
SHR5YOL110W CPR2P23285 205 aa12.91□□□□□ -0.34
SHR5YOL110W CLB2P24869 491 aa12.91□□□□□ -0.34
SHR5YOL110W PPA2P28239 310 aa12.91□□□□□ -0.34
SHR5YOL110W COS9P36034 407 aa12.91□□□□□ -0.34
SHR5YOL110W PCL6P40038 420 aa12.91□□□□□ -0.34
SHR5YOL110W BPL1P48445 690 aaPredicted RBP12.91□□□□□ -0.34
SHR5YOL110W PPT1P53043 513 aa12.91□□□□□ -0.34
SHR5YOL110W BNA7Q04066 261 aa12.91□□□□□ -0.34
SHR5YOL110W YOR378WQ08902 515 aa12.91□□□□□ -0.34
SHR5YOL110W FLO9P39712 1322 aa12.9□□□□□ -0.34
SHR5YOL110W ADH7P25377 361 aa12.9□□□□□ -0.34
SHR5YOL110W THI4P32318 326 aa12.9□□□□□ -0.34
SHR5YOL110W YBR063CP38083 404 aa12.9□□□□□ -0.34
SHR5YOL110W YEL057CP39983 233 aa12.9□□□□□ -0.34
SHR5YOL110W YIL169CP40442 995 aa12.9□□□□□ -0.34
SHR5YOL110W YAE1P47118 141 aaPredicted RBP12.9□□□□□ -0.34
SHR5YOL110W TY1A-NL1Q12391 440 aaKnown RBP12.9□□□□□ -0.34
SHR5YOL110W HMS1Q12398 434 aa12.9□□□□□ -0.34
SHR5YOL110W PBS2P08018 668 aa12.89□□□□□ -0.35
SHR5YOL110W STE12P13574 688 aa12.89□□□□□ -0.35
SHR5YOL110W PUT3P25502 979 aaPredicted RBP12.89□□□□□ -0.35
SHR5YOL110W MCM10P32354 571 aa12.89□□□□□ -0.35
SHR5YOL110W THI2P38141 450 aa12.89□□□□□ -0.35
SHR5YOL110W PRY1P47032 299 aa12.89□□□□□ -0.35
SHR5YOL110W SAY1P53324 424 aa12.89□□□□□ -0.35
SHR5YOL110W PAU12P53343 120 aa12.89□□□□□ -0.35
SHR5YOL110W BSC5P53755 489 aa12.89□□□□□ -0.35
SHR5YOL110W RCF1Q03713 159 aa12.89□□□□□ -0.35
SHR5YOL110W MIM1Q08176 113 aa12.89□□□□□ -0.35
SHR5YOL110W YEL009C-AA0A023PZF2 135 aa12.88□□□□□ -0.35
SHR5YOL110W AHC2P25649 128 aa12.88□□□□□ -0.35
SHR5YOL110W CAM1P29547 415 aaKnown RBP12.88□□□□□ -0.35
SHR5YOL110W FUN26P31381 517 aa12.88□□□□□ -0.35
SHR5YOL110W SCW11P53189 542 aa12.88□□□□□ -0.35
SHR5YOL110W CTS2Q06350 511 aa12.88□□□□□ -0.35
SHR5YOL110W ACF2Q12168 779 aa12.88□□□□□ -0.35
SHR5YOL110W YPR1Q12458 312 aa12.88□□□□□ -0.35
SHR5YOL110W FRE6Q12473 712 aa12.88□□□□□ -0.35
SHR5YOL110W MSW1P04803 379 aa12.87□□□□□ -0.35
SHR5YOL110W CBP6P07253 162 aaPredicted RBP12.87□□□□□ -0.35
SHR5YOL110W SPO7P18410 259 aa12.87□□□□□ -0.35
SHR5YOL110W GIT1P25346 518 aa12.87□□□□□ -0.35
SHR5YOL110W SBA1P28707 216 aaKnown RBP12.87□□□□□ -0.35
SHR5YOL110W ERG9P29704 444 aa12.87□□□□□ -0.35
SHR5YOL110W RSM22P36056 628 aa12.87□□□□□ -0.35
SHR5YOL110W SRP102P36057 244 aaPredicted RBP12.87□□□□□ -0.35
SHR5YOL110W GPX2P38143 162 aa12.87□□□□□ -0.35
SHR5YOL110W MSY1P48527 492 aa12.87□□□□□ -0.35
SHR5YOL110W YGR054WP53235 642 aaKnown RBP12.87□□□□□ -0.35
SHR5YOL110W MKC7P53379 596 aa12.87□□□□□ -0.35
SHR5YOL110W YDR514CQ04408 483 aa12.87□□□□□ -0.35
SHR5YOL110W AGE1Q04412 482 aa12.87□□□□□ -0.35
SHR5YOL110W RBS1Q05672 457 aaKnown RBP12.87□□□□□ -0.35
SHR5YOL110W BAG7Q12128 409 aa12.87□□□□□ -0.35
SHR5YOL110W OPI3P05375 206 aa12.86□□□□□ -0.35
SHR5YOL110W RPS13P05756 151 aaKnown RBP12.86□□□□□ -0.35
SHR5YOL110W RPA135P22138 1203 aaKnown RBP12.86□□□□□ -0.35
SHR5YOL110W PRE7P23724 241 aaKnown RBP12.86□□□□□ -0.35
SHR5YOL110W EXG1P23776 448 aaKnown RBP12.86□□□□□ -0.35
SHR5YOL110W PAU24P38155 120 aa12.86□□□□□ -0.35
SHR5YOL110W PTI1P39927 425 aaPredicted RBP12.86□□□□□ -0.35
SHR5YOL110W YJL218WP40892 196 aaKnown RBP12.86□□□□□ -0.35
SHR5YOL110W RSM24Q03976 319 aa12.86□□□□□ -0.35
SHR5YOL110W YHR214C-EQ8TGK0 99 aa12.86□□□□□ -0.35
SHR5YOL110W HMG1P12683 1054 aa12.85□□□□□ -0.35
SHR5YOL110W BOS1P25385 244 aa12.85□□□□□ -0.35
SHR5YOL110W KRR1P25586 316 aaPredicted RBP12.85□□□□□ -0.35
SHR5YOL110W GDS1P41913 522 aa12.85□□□□□ -0.35
SHR5YOL110W CPR8P53728 308 aa12.85□□□□□ -0.35
SHR5YOL110W SRP1Q02821 542 aaKnown RBP12.85□□□□□ -0.35
SHR5YOL110W KAP120Q02932 1032 aa12.85□□□□□ -0.35
SHR5YOL110W MRX8Q05473 314 aa12.85□□□□□ -0.35
SHR5YOL110W HRI1Q05905 244 aaKnown RBP12.85□□□□□ -0.35
SHR5YOL110W SYC1Q08553 188 aaPredicted RBP12.85□□□□□ -0.35
SHR5YOL110W SIR2P06700 562 aa12.84□□□□□ -0.35
SHR5YOL110W CDC31P06704 161 aaKnown RBP12.84□□□□□ -0.35
SHR5YOL110W STE18P18852 110 aa12.84□□□□□ -0.35
SHR5YOL110W RPC34P32910 317 aa12.84□□□□□ -0.35
SHR5YOL110W VPS17P32913 551 aa12.84□□□□□ -0.35
SHR5YOL110W MGE1P38523 228 aa12.84□□□□□ -0.35
SHR5YOL110W PMT6P42934 759 aa12.84□□□□□ -0.35
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms