RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W FAS2P19097 1887 aaKnown RBP2.8□□□□□ -1.96
MSH2YOL090W TUS1Q06412 1307 aa2.8□□□□□ -1.96
MSH2YOL090W AMD1P15274 810 aaKnown RBP2.8□□□□□ -1.96
MSH2YOL090W GIT1P25346 518 aa2.8□□□□□ -1.96
MSH2YOL090W YCR007CP25354 239 aa2.8□□□□□ -1.96
MSH2YOL090W PRX1P34227 261 aaKnown RBP2.8□□□□□ -1.96
MSH2YOL090W YBR056WP38081 501 aa2.8□□□□□ -1.96
MSH2YOL090W YBR096WP38256 230 aa2.8□□□□□ -1.96
MSH2YOL090W HAT2P39984 401 aa2.8□□□□□ -1.96
MSH2YOL090W IDP2P41939 412 aa2.8□□□□□ -1.96
MSH2YOL090W ORC5P50874 479 aa2.8□□□□□ -1.96
MSH2YOL090W MGA1P53050 456 aa2.8□□□□□ -1.96
MSH2YOL090W YNL140CP53910 189 aa2.8□□□□□ -1.96
MSH2YOL090W YMR114CQ04471 368 aaKnown RBP2.8□□□□□ -1.96
MSH2YOL090W SSK1Q07084 712 aa2.8□□□□□ -1.96
MSH2YOL090W POM33Q12164 279 aa2.8□□□□□ -1.96
MSH2YOL090W NCA2Q12374 616 aa2.8□□□□□ -1.96
MSH2YOL090W GSC2P40989 1895 aa2.8□□□□□ -1.96
MSH2YOL090W RPS24AP0CX31 135 aaKnown RBP2.8□□□□□ -1.96
MSH2YOL090W RPS24BP0CX32 135 aaKnown RBP2.8□□□□□ -1.96
MSH2YOL090W IDH1P28834 360 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
MSH2YOL090W BMH1P29311 267 aaKnown RBP2.8□□□□□ -1.96
MSH2YOL090W SNC1P31109 117 aa2.8□□□□□ -1.96
MSH2YOL090W ZRT1P32804 376 aa2.8□□□□□ -1.96
MSH2YOL090W YKL063CP35725 167 aa2.8□□□□□ -1.96
MSH2YOL090W MET30P39014 640 aa2.8□□□□□ -1.96
MSH2YOL090W RBG1P39729 369 aa2.8□□□□□ -1.96
MSH2YOL090W RPH1P39956 796 aa2.8□□□□□ -1.96
MSH2YOL090W YAT2P40017 923 aa2.8□□□□□ -1.96
MSH2YOL090W CTK3P46963 296 aaPredicted RBP2.8□□□□□ -1.96
MSH2YOL090W ECL1P48235 211 aa2.8□□□□□ -1.96
MSH2YOL090W MST27P53176 234 aa2.8□□□□□ -1.96
MSH2YOL090W YNR048WP53740 393 aa2.8□□□□□ -1.96
MSH2YOL090W CAF40P53829 373 aa2.8□□□□□ -1.96
MSH2YOL090W PFA4Q12006 378 aa2.8□□□□□ -1.96
MSH2YOL090W TMS1Q12116 473 aa2.8□□□□□ -1.96
MSH2YOL090W YDL009CQ12210 107 aa2.8□□□□□ -1.96
MSH2YOL090W MEX67Q99257 599 aaKnown RBP2.8□□□□□ -1.96
MSH2YOL090W MRPL8P22353 238 aa2.79□□□□□ -1.96
MSH2YOL090W DEP1P31385 405 aa2.79□□□□□ -1.96
MSH2YOL090W RAD5P32849 1169 aaPredicted RBP2.79□□□□□ -1.96
MSH2YOL090W CSE1P33307 960 aa2.79□□□□□ -1.96
MSH2YOL090W NTF2P33331 125 aaKnown RBP2.79□□□□□ -1.96
MSH2YOL090W RIM2P38127 377 aa2.79□□□□□ -1.96
MSH2YOL090W YPC1P38298 316 aa2.79□□□□□ -1.96
MSH2YOL090W ATG12P38316 186 aa2.79□□□□□ -1.96
MSH2YOL090W OSH3P38713 996 aaKnown RBP2.79□□□□□ -1.96
MSH2YOL090W IRC7P43623 340 aa2.79□□□□□ -1.96
MSH2YOL090W ADO1P47143 340 aaKnown RBP2.79□□□□□ -1.96
MSH2YOL090W ALG13P53178 202 aa2.79□□□□□ -1.96
MSH2YOL090W CPD1P53314 239 aa2.79□□□□□ -1.96
MSH2YOL090W MAL13P53338 473 aa2.79□□□□□ -1.96
MSH2YOL090W SPR6Q01684 191 aa2.79□□□□□ -1.96
MSH2YOL090W YMR166CQ03829 368 aa2.79□□□□□ -1.96
MSH2YOL090W PEX10Q05568 337 aa2.79□□□□□ -1.96
MSH2YOL090W NNT1Q05874 261 aa2.79□□□□□ -1.96
MSH2YOL090W TUB1P09733 447 aaKnown RBP2.79□□□□□ -1.96
MSH2YOL090W HOM6P31116 359 aaKnown RBP2.79□□□□□ -1.96
MSH2YOL090W YMC1P32331 307 aa2.79□□□□□ -1.96
MSH2YOL090W QRI5P32344 111 aa2.79□□□□□ -1.96
MSH2YOL090W YEF1P32622 495 aa2.79□□□□□ -1.96
MSH2YOL090W RIB5P38145 238 aa2.79□□□□□ -1.96
MSH2YOL090W BMT5P40493 336 aa2.79□□□□□ -1.96
MSH2YOL090W RPL10P41805 221 aaKnown RBP2.79□□□□□ -1.96
MSH2YOL090W WWM1P43582 211 aaKnown RBP2.79□□□□□ -1.96
MSH2YOL090W YNL095CP53932 642 aa2.79□□□□□ -1.96
MSH2YOL090W VAC7P53950 1165 aa2.79□□□□□ -1.96
MSH2YOL090W STP1Q00947 519 aa2.79□□□□□ -1.96
MSH2YOL090W MRS2Q01926 470 aa2.79□□□□□ -1.96
MSH2YOL090W SPC2Q04969 178 aa2.79□□□□□ -1.96
MSH2YOL090W ECI1Q05871 280 aa2.79□□□□□ -1.96
MSH2YOL090W TAZ1Q06510 381 aa2.79□□□□□ -1.96
MSH2YOL090W ACF2Q12168 779 aa2.79□□□□□ -1.96
MSH2YOL090W PAB1P04147 577 aaKnown RBP RIP-Chip data2.79□□□□□ -1.96not detected
MSH2YOL090W ASP3-2P0CX77 362 aa2.79□□□□□ -1.96
MSH2YOL090W ASP3-3P0CX78 362 aa2.79□□□□□ -1.96
MSH2YOL090W ASP3-4P0CX79 362 aa2.79□□□□□ -1.96
MSH2YOL090W ASP3-1P0CZ17 362 aa2.79□□□□□ -1.96
MSH2YOL090W MTF1P14908 341 aaKnown RBP2.79□□□□□ -1.96
MSH2YOL090W FRE2P36033 711 aa2.79□□□□□ -1.96
MSH2YOL090W FIG1P38224 298 aa2.79□□□□□ -1.96
MSH2YOL090W YHR035WP38769 630 aa2.79□□□□□ -1.96
MSH2YOL090W SOP4P39543 234 aaPredicted RBP2.79□□□□□ -1.96
MSH2YOL090W MNN10P50108 393 aaKnown RBP2.79□□□□□ -1.96
MSH2YOL090W YPT32P51996 222 aaKnown RBP2.79□□□□□ -1.96
MSH2YOL090W GND2P53319 492 aa2.79□□□□□ -1.96
MSH2YOL090W MRPL51Q06090 140 aaPredicted RBP2.79□□□□□ -1.96
MSH2YOL090W SEC10Q06245 871 aa2.79□□□□□ -1.96
MSH2YOL090W RPN6Q12377 434 aa2.79□□□□□ -1.96
MSH2YOL090W PNS1Q12412 539 aa2.79□□□□□ -1.96
MSH2YOL090W YLR111WQ12528 110 aa2.79□□□□□ -1.96
MSH2YOL090W TEF1P02994 458 aaKnown RBP2.78□□□□□ -1.96
MSH2YOL090W CAP2P13517 287 aa2.78□□□□□ -1.96
MSH2YOL090W EXG1P23776 448 aaKnown RBP2.78□□□□□ -1.96
MSH2YOL090W RNA15P25299 296 aaPredicted RBP2.78□□□□□ -1.96
MSH2YOL090W CTS1P29029 562 aa2.78□□□□□ -1.96
MSH2YOL090W YPT35P38815 214 aaKnown RBP2.78□□□□□ -1.96
MSH2YOL090W SHC1P39000 512 aa2.78□□□□□ -1.96
MSH2YOL090W PAC2P39937 518 aa2.78□□□□□ -1.96
MSH2YOL090W GAT1P43574 510 aa2.78□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms