RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W YBR096WP38256 230 aa3.37□□□□□ -1.87
VPS27YNR006W SDS24P38314 527 aa3.37□□□□□ -1.87
VPS27YNR006W DFG10P40526 253 aa3.37□□□□□ -1.87
VPS27YNR006W YIA6P40556 373 aa3.37□□□□□ -1.87
VPS27YNR006W YIL001WP40560 513 aa3.37□□□□□ -1.87
VPS27YNR006W ERG13P54839 491 aaKnown RBP3.37□□□□□ -1.87
VPS27YNR006W SFH1Q06168 426 aa3.37□□□□□ -1.87
VPS27YNR006W CTR3Q06686 241 aa3.37□□□□□ -1.87
VPS27YNR006W PLB3Q08108 686 aa3.37□□□□□ -1.87
VPS27YNR006W TLG2Q08144 397 aa3.37□□□□□ -1.87
VPS27YNR006W SME1Q12330 94 aaPredicted RBP3.37□□□□□ -1.87
VPS27YNR006W REV3P14284 1504 aa3.37□□□□□ -1.87
VPS27YNR006W DNA2P38859 1522 aa3.37□□□□□ -1.87
VPS27YNR006W MDM10P18409 493 aa3.36□□□□□ -1.87
VPS27YNR006W AIM17P23180 465 aaKnown RBP3.36□□□□□ -1.87
VPS27YNR006W SPO23P33757 523 aa3.36□□□□□ -1.87
VPS27YNR006W PRX1P34227 261 aaKnown RBP3.36□□□□□ -1.87
VPS27YNR006W MTC6P38849 526 aa3.36□□□□□ -1.87
VPS27YNR006W SEC72P39742 193 aaKnown RBP3.36□□□□□ -1.87
VPS27YNR006W ALG8P40351 577 aa3.36□□□□□ -1.87
VPS27YNR006W YJR012CP47087 207 aa3.36□□□□□ -1.87
VPS27YNR006W MGA1P53050 456 aa3.36□□□□□ -1.87
VPS27YNR006W MRM2P53123 320 aa3.36□□□□□ -1.87
VPS27YNR006W GET1P53192 235 aa3.36□□□□□ -1.87
VPS27YNR006W PEX31P53203 462 aa3.36□□□□□ -1.87
VPS27YNR006W YNL095CP53932 642 aa3.36□□□□□ -1.87
VPS27YNR006W CTF19Q02732 369 aa3.36□□□□□ -1.87
VPS27YNR006W EBS1Q03466 884 aaKnown RBP3.36□□□□□ -1.87
VPS27YNR006W TDA1Q03533 586 aa3.36□□□□□ -1.87
VPS27YNR006W TAF10Q12030 206 aa3.36□□□□□ -1.87
VPS27YNR006W TPI1P00942 248 aaKnown RBP3.35□□□□□ -1.87
VPS27YNR006W YFL068WP0CX99 160 aa3.35□□□□□ -1.87
VPS27YNR006W YLL066W-AP0CY00 160 aa3.35□□□□□ -1.87
VPS27YNR006W YLL067W-AP0CY01 160 aa3.35□□□□□ -1.87
VPS27YNR006W MRS3P10566 314 aa3.35□□□□□ -1.87
VPS27YNR006W ATS1P31386 333 aa3.35□□□□□ -1.87
VPS27YNR006W SCO2P38072 301 aa3.35□□□□□ -1.87
VPS27YNR006W RRP3P38712 501 aaKnown RBP3.35□□□□□ -1.87
VPS27YNR006W YNL320WP42840 284 aa3.35□□□□□ -1.87
VPS27YNR006W IBA57P47158 497 aa3.35□□□□□ -1.87
VPS27YNR006W YPT32P51996 222 aaKnown RBP3.35□□□□□ -1.87
VPS27YNR006W SUR7P54003 302 aa3.35□□□□□ -1.87
VPS27YNR006W TRM44Q02648 567 aaKnown RBP3.35□□□□□ -1.87
VPS27YNR006W RNY1Q02933 434 aaKnown RBP3.35□□□□□ -1.87
VPS27YNR006W YMR166CQ03829 368 aa3.35□□□□□ -1.87
VPS27YNR006W HCR1Q05775 265 aaKnown RBP3.35□□□□□ -1.87
VPS27YNR006W YPR064WQ12492 139 aa3.35□□□□□ -1.87
VPS27YNR006W CKA2P19454 339 aa3.35□□□□□ -1.87
VPS27YNR006W RPL16AP26784 199 aaKnown RBP3.35□□□□□ -1.87
VPS27YNR006W PET8P38921 284 aa3.35□□□□□ -1.87
VPS27YNR006W MET30P39014 640 aa3.35□□□□□ -1.87
VPS27YNR006W COX14P39103 70 aa3.35□□□□□ -1.87
VPS27YNR006W MTW1P39731 289 aa3.35□□□□□ -1.87
VPS27YNR006W COX15P40086 486 aa3.35□□□□□ -1.87
VPS27YNR006W XBP1P40489 647 aa3.35□□□□□ -1.87
VPS27YNR006W LCB3P47013 409 aa3.35□□□□□ -1.87
VPS27YNR006W TPN1P53099 579 aa3.35□□□□□ -1.87
VPS27YNR006W YMR114CQ04471 368 aaKnown RBP3.35□□□□□ -1.87
VPS27YNR006W MFG1Q07684 458 aa3.35□□□□□ -1.87
VPS27YNR006W YOR114WQ12219 294 aa3.35□□□□□ -1.87
VPS27YNR006W YGK3Q12222 375 aaPredicted RBP3.35□□□□□ -1.87
VPS27YNR006W YCT1Q12235 531 aa3.35□□□□□ -1.87
VPS27YNR006W YDL199CQ12407 687 aa3.35□□□□□ -1.87
VPS27YNR006W PCL9Q12477 304 aa3.35□□□□□ -1.87
VPS27YNR006W RPS3P05750 240 aaKnown RBP3.34□□□□□ -1.87
VPS27YNR006W CYC3P06182 269 aa3.34□□□□□ -1.87
VPS27YNR006W RPL23AP0CX41 137 aaKnown RBP3.34□□□□□ -1.87
VPS27YNR006W RPL23BP0CX42 137 aaKnown RBP3.34□□□□□ -1.87
VPS27YNR006W NAM9P27929 486 aa3.34□□□□□ -1.87
VPS27YNR006W IDH1P28834 360 aaKnown RBP RIP-Chip data3.34□□□□□ -1.87not detected
VPS27YNR006W FUN26P31381 517 aa3.34□□□□□ -1.87
VPS27YNR006W RAD5P32849 1169 aaPredicted RBP3.34□□□□□ -1.87
VPS27YNR006W SSO1P32867 290 aa3.34□□□□□ -1.87
VPS27YNR006W NTF2P33331 125 aaKnown RBP3.34□□□□□ -1.87
VPS27YNR006W MTC4P38335 694 aaKnown RBP3.34□□□□□ -1.87
VPS27YNR006W IKI1P38874 309 aa3.34□□□□□ -1.87
VPS27YNR006W USE1P53146 245 aa3.34□□□□□ -1.87
VPS27YNR006W RTC4P53850 401 aa3.34□□□□□ -1.87
VPS27YNR006W SWS2P53937 143 aa3.34□□□□□ -1.87
VPS27YNR006W YDR415CQ04033 374 aaPredicted RBP3.34□□□□□ -1.87
VPS27YNR006W LOA1Q06508 300 aa3.34□□□□□ -1.87
VPS27YNR006W MHR1Q06630 226 aa3.34□□□□□ -1.87
VPS27YNR006W GPM2Q12008 311 aa3.34□□□□□ -1.87
VPS27YNR006W THP3Q12049 470 aaKnown RBP3.34□□□□□ -1.87
VPS27YNR006W YDL109CQ12103 647 aa3.34□□□□□ -1.87
VPS27YNR006W PRM4Q12498 284 aa3.34□□□□□ -1.87
VPS27YNR006W HEM4P06174 275 aa3.33□□□□□ -1.88
VPS27YNR006W RPS14AP06367 137 aaKnown RBP3.33□□□□□ -1.88
VPS27YNR006W PMT2P31382 759 aa3.33□□□□□ -1.88
VPS27YNR006W UBC6P33296 250 aaPredicted RBP3.33□□□□□ -1.88
VPS27YNR006W AST1P35183 429 aa3.33□□□□□ -1.88
VPS27YNR006W PMU1P36069 295 aa3.33□□□□□ -1.88
VPS27YNR006W RPS14BP39516 138 aaKnown RBP3.33□□□□□ -1.88
VPS27YNR006W HEM14P40012 539 aa3.33□□□□□ -1.88
VPS27YNR006W PSA1P41940 361 aaKnown RBP3.33□□□□□ -1.88
VPS27YNR006W YFR057WP43625 151 aa3.33□□□□□ -1.88
VPS27YNR006W ADO1P47143 340 aaKnown RBP3.33□□□□□ -1.88
VPS27YNR006W MIC26P50087 233 aa3.33□□□□□ -1.88
VPS27YNR006W YPS5P53057 165 aa3.33□□□□□ -1.88
VPS27YNR006W YGR067CP53243 804 aa3.33□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 51.8 ms