RNA–Protein interactions for RNA: YNL335W

DDI3, Transcript of Protein of unknown function, yeastyeast

Gene DDI3, Length 678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDI3YNL335W YPQ1Q12010 308 aa3.34□□□□□ -1.87
DDI3YNL335W YPL150WQ12152 901 aa3.34□□□□□ -1.87
DDI3YNL335W RPN6Q12377 434 aa3.34□□□□□ -1.87
DDI3YNL335W DDP1Q99321 188 aaKnown RBP3.34□□□□□ -1.87
DDI3YNL335W CBP2P03874 630 aaPredicted RBP3.33□□□□□ -1.88
DDI3YNL335W RPL18AP0CX49 186 aaKnown RBP3.33□□□□□ -1.88
DDI3YNL335W RPL18BP0CX50 186 aaKnown RBP3.33□□□□□ -1.88
DDI3YNL335W EPT1P22140 391 aa3.33□□□□□ -1.88
DDI3YNL335W SPS19P32573 292 aaKnown RBP3.33□□□□□ -1.88
DDI3YNL335W OSW5P40219 148 aa3.33□□□□□ -1.88
DDI3YNL335W VPS60Q03390 229 aa3.33□□□□□ -1.88
DDI3YNL335W TAF10Q12030 206 aa3.33□□□□□ -1.88
DDI3YNL335W SSK22P25390 1331 aaPredicted RBP3.33□□□□□ -1.88
DDI3YNL335W VPS63O13549 108 aa3.32□□□□□ -1.88
DDI3YNL335W MATALPHA2P0CY08 210 aa3.32□□□□□ -1.88
DDI3YNL335W HMLALPHA2P0CY09 210 aa3.32□□□□□ -1.88
DDI3YNL335W CTA1P15202 515 aa3.32□□□□□ -1.88
DDI3YNL335W BGL2P15703 313 aaKnown RBP3.32□□□□□ -1.88
DDI3YNL335W YPS1P32329 569 aa3.32□□□□□ -1.88
DDI3YNL335W MEI5P32489 222 aa3.32□□□□□ -1.88
DDI3YNL335W ECM34P38728 170 aa3.32□□□□□ -1.88
DDI3YNL335W UTP25P40498 721 aaKnown RBP3.32□□□□□ -1.88
DDI3YNL335W NRM1P53718 249 aa3.32□□□□□ -1.88
DDI3YNL335W CAB5Q03941 241 aa3.32□□□□□ -1.88
DDI3YNL335W ECM11Q04110 302 aa3.32□□□□□ -1.88
DDI3YNL335W RPN8Q08723 338 aaKnown RBP3.32□□□□□ -1.88
DDI3YNL335W MMT2Q08970 484 aa3.32□□□□□ -1.88
DDI3YNL335W SLF1Q12034 447 aaKnown RBP3.32□□□□□ -1.88
DDI3YNL335W MDY2Q12285 212 aa3.32□□□□□ -1.88
DDI3YNL335W KTI12P34253 313 aaKnown RBP3.31□□□□□ -1.88
DDI3YNL335W YKT6P36015 200 aaKnown RBP3.31□□□□□ -1.88
DDI3YNL335W SWC5P38326 303 aa3.31□□□□□ -1.88
DDI3YNL335W SMF2P38778 549 aa3.31□□□□□ -1.88
DDI3YNL335W CHL4P38907 458 aa3.31□□□□□ -1.88
DDI3YNL335W PES4P39684 611 aa3.31□□□□□ -1.88
DDI3YNL335W YFL012WP43580 148 aa3.31□□□□□ -1.88
DDI3YNL335W ABZ2Q03266 374 aa3.31□□□□□ -1.88
DDI3YNL335W SCS7Q03529 384 aa3.31□□□□□ -1.88
DDI3YNL335W STE2D6VTK4 431 aa3.3□□□□□ -1.88
DDI3YNL335W GCD2P12754 651 aaPredicted RBP3.3□□□□□ -1.88
DDI3YNL335W OSM1P21375 501 aaKnown RBP3.3□□□□□ -1.88
DDI3YNL335W SMP1P38128 452 aa3.3□□□□□ -1.88
DDI3YNL335W RFT1P38206 574 aaPredicted RBP3.3□□□□□ -1.88
DDI3YNL335W EFM1P38732 585 aa3.3□□□□□ -1.88
DDI3YNL335W GGC1P38988 300 aa3.3□□□□□ -1.88
DDI3YNL335W FHL1P39521 936 aa3.3□□□□□ -1.88
DDI3YNL335W YFR018CP43599 363 aa3.3□□□□□ -1.88
DDI3YNL335W FIG2P25653 1609 aa3.3□□□□□ -1.88
DDI3YNL335W TPI1P00942 248 aaKnown RBP3.29□□□□□ -1.88
DDI3YNL335W REP1P03871 373 aa3.29□□□□□ -1.88
DDI3YNL335W PUT4P15380 627 aa3.29□□□□□ -1.88
DDI3YNL335W SKI2P35207 1287 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
DDI3YNL335W YER184CP39961 794 aa3.29□□□□□ -1.88
DDI3YNL335W INA22P40576 216 aa3.29□□□□□ -1.88
DDI3YNL335W HIT1P46973 164 aa3.29□□□□□ -1.88
DDI3YNL335W FLC3P53121 802 aa3.29□□□□□ -1.88
DDI3YNL335W MRS2Q01926 470 aa3.29□□□□□ -1.88
DDI3YNL335W API2Q04413 109 aa3.29□□□□□ -1.88
DDI3YNL335W FAR10Q06001 478 aa3.29□□□□□ -1.88
DDI3YNL335W YPR1Q12458 312 aa3.29□□□□□ -1.88
DDI3YNL335W MYO1P08964 1928 aa3.29□□□□□ -1.88
DDI3YNL335W HKR1P41809 1802 aa3.28□□□□□ -1.88
DDI3YNL335W SAC3P46674 1301 aa3.28□□□□□ -1.88
DDI3YNL335W SAL1D6W196 494 aa3.28□□□□□ -1.88
DDI3YNL335W BUD2P33314 1104 aa3.28□□□□□ -1.88
DDI3YNL335W MNN9P39107 395 aaKnown RBP3.28□□□□□ -1.88
DDI3YNL335W RRT13P40042 185 aa3.28□□□□□ -1.88
DDI3YNL335W SED5Q01590 340 aa3.28□□□□□ -1.88
DDI3YNL335W IRC4Q03036 179 aa3.28□□□□□ -1.88
DDI3YNL335W MRX9Q07349 420 aaKnown RBP3.28□□□□□ -1.88
DDI3YNL335W DTD1Q07648 150 aaKnown RBP3.28□□□□□ -1.88
DDI3YNL335W RDL2Q08742 149 aaKnown RBP3.28□□□□□ -1.88
DDI3YNL335W SAM4Q08985 325 aaKnown RBP3.28□□□□□ -1.88
DDI3YNL335W PRM4Q12498 284 aa3.28□□□□□ -1.88
DDI3YNL335W YBL111CQ3E7Y5 667 aa3.28□□□□□ -1.88
DDI3YNL335W FKS1P38631 1876 aaKnown RBP3.27□□□□□ -1.89
DDI3YNL335W RPL22AP05749 121 aaKnown RBP3.27□□□□□ -1.89
DDI3YNL335W MSS116P15424 664 aaKnown RBP3.27□□□□□ -1.89
DDI3YNL335W CBF5P33322 483 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
DDI3YNL335W VOA1P53262 265 aa3.27□□□□□ -1.89
DDI3YNL335W SML1Q04964 104 aa3.27□□□□□ -1.89
DDI3YNL335W PAA1Q12447 191 aaKnown RBP3.27□□□□□ -1.89
DDI3YNL335W YKL068W-AQ3E826 78 aa3.27□□□□□ -1.89
DDI3YNL335W PMD1P32634 1753 aa3.26□□□□□ -1.89
DDI3YNL335W SPS100P13130 326 aa3.26□□□□□ -1.89
DDI3YNL335W PHO13P19881 312 aa3.26□□□□□ -1.89
DDI3YNL335W YKL162CP36052 402 aa3.26□□□□□ -1.89
DDI3YNL335W DTR1P38125 572 aa3.26□□□□□ -1.89
DDI3YNL335W TAE1P38340 232 aa3.26□□□□□ -1.89
DDI3YNL335W FET3P38993 636 aa3.26□□□□□ -1.89
DDI3YNL335W LOH1P47055 219 aa3.26□□□□□ -1.89
DDI3YNL335W RIB4P50861 169 aaPredicted RBP3.26□□□□□ -1.89
DDI3YNL335W DBP6P53734 629 aaKnown RBP3.26□□□□□ -1.89
DDI3YNL335W YPL080CQ02826 108 aa3.26□□□□□ -1.89
DDI3YNL335W PIN3Q06449 215 aa3.26□□□□□ -1.89
DDI3YNL335W CUR1Q06469 252 aa3.26□□□□□ -1.89
DDI3YNL335W YLR012CQ07927 99 aa3.26□□□□□ -1.89
DDI3YNL335W YOL029CQ08187 201 aa3.26□□□□□ -1.89
DDI3YNL335W TIR4Q12218 487 aaPredicted RBP3.26□□□□□ -1.89
DDI3YNL335W RAX2Q12465 1220 aa3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms