RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C OSH6Q02201 448 aa1.65□□□□□ -2.15
UBX4YMR067C GPX1P36014 167 aa1.64□□□□□ -2.15
UBX4YMR067C YFL040WP43562 540 aa1.64□□□□□ -2.15
UBX4YMR067C IRC4Q03036 179 aa1.64□□□□□ -2.15
UBX4YMR067C RCF1Q03713 159 aa1.64□□□□□ -2.15
UBX4YMR067C BUR2Q05949 395 aa1.64□□□□□ -2.15
UBX4YMR067C PRR2Q12310 699 aa1.64□□□□□ -2.15
UBX4YMR067C YAL063C-AQ3E791 96 aa1.64□□□□□ -2.15
UBX4YMR067C TAL1P15019 335 aaKnown RBP1.63□□□□□ -2.15
UBX4YMR067C RRT12P25381 491 aa1.63□□□□□ -2.15
UBX4YMR067C YHR035WP38769 630 aa1.63□□□□□ -2.15
UBX4YMR067C YGR266WP53326 701 aa1.63□□□□□ -2.15
UBX4YMR067C CGI121Q03705 181 aaKnown RBP1.63□□□□□ -2.15
UBX4YMR067C SNX41Q04053 625 aa1.63□□□□□ -2.15
UBX4YMR067C YDL144CQ07589 356 aa1.63□□□□□ -2.15
UBX4YMR067C PLB3Q08108 686 aa1.63□□□□□ -2.15
UBX4YMR067C MRPL3P36516 390 aa1.62□□□□□ -2.15
UBX4YMR067C CAJ1P39101 391 aa1.62□□□□□ -2.15
UBX4YMR067C YER188WP40103 239 aa1.62□□□□□ -2.15
UBX4YMR067C INA22P40576 216 aa1.62□□□□□ -2.15
UBX4YMR067C SYS1P41544 203 aa1.62□□□□□ -2.15
UBX4YMR067C YJR141WP47172 347 aaPredicted RBP1.62□□□□□ -2.15
UBX4YMR067C MIG2P53035 382 aa1.62□□□□□ -2.15
UBX4YMR067C CUE3P53137 624 aaKnown RBP1.62□□□□□ -2.15
UBX4YMR067C YLR446WQ06204 433 aa1.62□□□□□ -2.15
UBX4YMR067C TY3A-GQ12173 290 aa1.62□□□□□ -2.15
UBX4YMR067C UTP23Q12339 254 aaKnown RBP1.62□□□□□ -2.15
UBX4YMR067C DCP1Q12517 231 aaPredicted RBP1.62□□□□□ -2.15
UBX4YMR067C TY3A-IQ99219 290 aa1.62□□□□□ -2.15
UBX4YMR067C RPL26AP05743 127 aaKnown RBP1.61□□□□□ -2.15
UBX4YMR067C HIS3P06633 220 aa1.61□□□□□ -2.15
UBX4YMR067C RNR2P09938 399 aaKnown RBP1.61□□□□□ -2.15
UBX4YMR067C PHO80P20052 293 aa1.61□□□□□ -2.15
UBX4YMR067C CDC13P32797 924 aaKnown RBP1.61□□□□□ -2.15
UBX4YMR067C MCH2P36032 473 aa1.61□□□□□ -2.15
UBX4YMR067C LAS1P36146 502 aaPredicted RBP1.61□□□□□ -2.15
UBX4YMR067C TRM7P38238 310 aaKnown RBP1.61□□□□□ -2.15
UBX4YMR067C BAT2P47176 376 aaKnown RBP1.61□□□□□ -2.15
UBX4YMR067C PRP24P49960 444 aaKnown RBP1.61□□□□□ -2.15
UBX4YMR067C RPL26BP53221 127 aaKnown RBP1.61□□□□□ -2.15
UBX4YMR067C YGR168CP53293 376 aa1.61□□□□□ -2.15
UBX4YMR067C ALG9P53868 555 aaKnown RBP1.61□□□□□ -2.15
UBX4YMR067C NNT1Q05874 261 aa1.61□□□□□ -2.15
UBX4YMR067C VPS68Q12016 184 aa1.61□□□□□ -2.15
UBX4YMR067C AVT6P40074 448 aa1.6□□□□□ -2.15
UBX4YMR067C OKP1P53298 406 aa1.6□□□□□ -2.15
UBX4YMR067C SSU72P53538 206 aaPredicted RBP1.6□□□□□ -2.15
UBX4YMR067C PDR16P53860 351 aaKnown RBP1.6□□□□□ -2.15
UBX4YMR067C TVP15Q03860 143 aa1.6□□□□□ -2.15
UBX4YMR067C YPL278CQ08990 100 aa1.6□□□□□ -2.15
UBX4YMR067C POT1P27796 417 aaKnown RBP RIP-Chip data1.59□□□□□ -2.15not detected
UBX4YMR067C YEL043WP32618 956 aa1.59□□□□□ -2.15
UBX4YMR067C SIF2P38262 535 aa1.59□□□□□ -2.15
UBX4YMR067C MBA1P38300 278 aa1.59□□□□□ -2.15
UBX4YMR067C YIL012WP40551 113 aa1.59□□□□□ -2.15
UBX4YMR067C BIO4P53630 237 aa1.59□□□□□ -2.15
UBX4YMR067C ADH3P07246 375 aaKnown RBP1.58□□□□□ -2.16
UBX4YMR067C OSM1P21375 501 aaKnown RBP1.58□□□□□ -2.16
UBX4YMR067C SCO1P23833 295 aa1.58□□□□□ -2.16
UBX4YMR067C IMP1P28627 190 aa1.58□□□□□ -2.16
UBX4YMR067C ZRT1P32804 376 aa1.58□□□□□ -2.16
UBX4YMR067C TPO5P36029 618 aa1.58□□□□□ -2.16
UBX4YMR067C LIN1P38852 340 aaPredicted RBP1.58□□□□□ -2.16
UBX4YMR067C KRE29P40026 464 aa1.58□□□□□ -2.16
UBX4YMR067C DSK2P48510 373 aa1.58□□□□□ -2.16
UBX4YMR067C GAL7P08431 366 aa1.57□□□□□ -2.16
UBX4YMR067C RPL16BP26785 198 aaKnown RBP1.57□□□□□ -2.16
UBX4YMR067C VAB2P40003 282 aa1.57□□□□□ -2.16
UBX4YMR067C UTP25P40498 721 aaKnown RBP1.57□□□□□ -2.16
UBX4YMR067C PIR5P46999 287 aa1.57□□□□□ -2.16
UBX4YMR067C UBC13P52490 153 aa1.57□□□□□ -2.16
UBX4YMR067C SWC4P53201 476 aa1.57□□□□□ -2.16
UBX4YMR067C MYO5Q04439 1219 aaKnown RBP1.57□□□□□ -2.16
UBX4YMR067C YLL007CQ07799 665 aa1.57□□□□□ -2.16
UBX4YMR067C RTC5Q12108 567 aaKnown RBP1.57□□□□□ -2.16
UBX4YMR067C YCR025CP25352 136 aa1.56□□□□□ -2.16
UBX4YMR067C NRG2P38082 220 aa1.56□□□□□ -2.16
UBX4YMR067C YBR062CP38239 180 aa1.56□□□□□ -2.16
UBX4YMR067C OST3P48439 350 aa1.56□□□□□ -2.16
UBX4YMR067C SPO77Q06134 477 aa1.56□□□□□ -2.16
UBX4YMR067C PML1Q07930 204 aaPredicted RBP1.56□□□□□ -2.16
UBX4YMR067C NFI1Q12216 726 aa1.56□□□□□ -2.16
UBX4YMR067C AGC1Q12482 902 aa1.56□□□□□ -2.16
UBX4YMR067C RPL18AP0CX49 186 aaKnown RBP1.55□□□□□ -2.16
UBX4YMR067C RPL18BP0CX50 186 aaKnown RBP1.55□□□□□ -2.16
UBX4YMR067C GAL3P13045 520 aa1.55□□□□□ -2.16
UBX4YMR067C VPH1P32563 840 aaKnown RBP1.55□□□□□ -2.16
UBX4YMR067C IMP3P32899 183 aaPredicted RBP1.55□□□□□ -2.16
UBX4YMR067C YHR045WP38775 560 aa1.55□□□□□ -2.16
UBX4YMR067C SPL2P38839 148 aa1.55□□□□□ -2.16
UBX4YMR067C POP2P39008 433 aa1.55□□□□□ -2.16
UBX4YMR067C MND1P53102 219 aa1.55□□□□□ -2.16
UBX4YMR067C IZH4Q99393 312 aa1.55□□□□□ -2.16
UBX4YMR067C NUP157P40064 1391 aaKnown RBP1.55□□□□□ -2.16
UBX4YMR067C DPM1P14020 267 aaKnown RBP1.54□□□□□ -2.16
UBX4YMR067C MSS116P15424 664 aaKnown RBP1.54□□□□□ -2.16
UBX4YMR067C YKL162CP36052 402 aa1.54□□□□□ -2.16
UBX4YMR067C YPC1P38298 316 aa1.54□□□□□ -2.16
UBX4YMR067C SUR2P38992 349 aa1.54□□□□□ -2.16
UBX4YMR067C MPP10P47083 593 aaKnown RBP1.54□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms