RNA–Protein interactions for RNA: YMR047C

NUP116, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP116, Length 3,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP116YMR047C YPL068CQ02749 293 aa4.49□□□□□ -1.69
NUP116YMR047C YGL194C-AQ2V2P6 80 aa4.49□□□□□ -1.69
NUP116YMR047C FSH3Q99369 266 aa4.49□□□□□ -1.69
NUP116YMR047C SAN1P22470 610 aa4.48□□□□□ -1.69
NUP116YMR047C PRE7P23724 241 aaKnown RBP4.48□□□□□ -1.69
NUP116YMR047C ELO2P25358 347 aa4.48□□□□□ -1.69
NUP116YMR047C RHB1P25378 209 aa4.48□□□□□ -1.69
NUP116YMR047C DCG1P32460 244 aa4.48□□□□□ -1.69
NUP116YMR047C SIP1P32578 815 aa4.48□□□□□ -1.69
NUP116YMR047C NSE4P43124 402 aa4.48□□□□□ -1.69
NUP116YMR047C IBA57P47158 497 aa4.48□□□□□ -1.69
NUP116YMR047C CCC1P47818 322 aa4.48□□□□□ -1.69
NUP116YMR047C YMR155WQ03795 547 aa4.48□□□□□ -1.69
NUP116YMR047C YAP6Q03935 383 aa4.48□□□□□ -1.69
NUP116YMR047C AGE1Q04412 482 aa4.48□□□□□ -1.69
NUP116YMR047C PML1Q07930 204 aaPredicted RBP4.48□□□□□ -1.69
NUP116YMR047C FRE6Q12473 712 aa4.48□□□□□ -1.69
NUP116YMR047C YKL033W-AQ86ZR7 236 aa4.48□□□□□ -1.69
NUP116YMR047C ADH2P00331 348 aaKnown RBP4.48□□□□□ -1.69
NUP116YMR047C GRR1P24814 1151 aa4.48□□□□□ -1.69
NUP116YMR047C PTP2P29461 750 aa4.48□□□□□ -1.69
NUP116YMR047C APE2P32454 952 aaKnown RBP4.48□□□□□ -1.69
NUP116YMR047C YKL162CP36052 402 aa4.48□□□□□ -1.69
NUP116YMR047C YBR032WP38223 100 aa4.48□□□□□ -1.69
NUP116YMR047C YCL001W-AP87012 153 aa4.48□□□□□ -1.69
NUP116YMR047C SMA2Q04658 369 aa4.48□□□□□ -1.69
NUP116YMR047C TMA10Q06177 86 aa4.48□□□□□ -1.69
NUP116YMR047C YNG1Q08465 219 aa4.48□□□□□ -1.69
NUP116YMR047C SEN1Q00416 2231 aaKnown RBP4.48□□□□□ -1.69
NUP116YMR047C RPL43AP0CX25 92 aaKnown RBP4.47□□□□□ -1.69
NUP116YMR047C RPL43BP0CX26 92 aa4.47□□□□□ -1.69
NUP116YMR047C HYM1P32464 399 aa4.47□□□□□ -1.69
NUP116YMR047C ECT1P33412 323 aa4.47□□□□□ -1.69
NUP116YMR047C EHT1P38295 451 aa4.47□□□□□ -1.69
NUP116YMR047C AYR1P40471 297 aa4.47□□□□□ -1.69
NUP116YMR047C IKS1P47042 667 aa4.47□□□□□ -1.69
NUP116YMR047C SPR28Q04921 423 aa4.47□□□□□ -1.69
NUP116YMR047C YPL245WQ12179 454 aaKnown RBP4.47□□□□□ -1.69
NUP116YMR047C AME1P38313 324 aa4.47□□□□□ -1.69
NUP116YMR047C ALK1P43633 760 aaKnown RBP4.47□□□□□ -1.69
NUP116YMR047C YNR066CP53752 436 aa4.47□□□□□ -1.69
NUP116YMR047C YPL077CQ02831 240 aa4.47□□□□□ -1.69
NUP116YMR047C VBA4Q04602 768 aaKnown RBP4.47□□□□□ -1.69
NUP116YMR047C SYC1Q08553 188 aaPredicted RBP4.47□□□□□ -1.69
NUP116YMR047C CSM4Q08955 156 aa4.47□□□□□ -1.69
NUP116YMR047C YPR011CQ12251 326 aa4.47□□□□□ -1.69
NUP116YMR047C SFM1Q12314 213 aa4.47□□□□□ -1.69
NUP116YMR047C AIM45Q12480 344 aaKnown RBP4.47□□□□□ -1.69
NUP116YMR047C RPL7AP05737 244 aaKnown RBP4.47□□□□□ -1.69
NUP116YMR047C SEC12P11655 471 aa4.47□□□□□ -1.69
NUP116YMR047C AHC2P25649 128 aa4.47□□□□□ -1.69
NUP116YMR047C NDC1P32500 655 aa4.47□□□□□ -1.69
NUP116YMR047C PRP21P32524 280 aaPredicted RBP4.47□□□□□ -1.69
NUP116YMR047C APT2P36973 181 aa4.47□□□□□ -1.69
NUP116YMR047C ARN1P38731 627 aa4.47□□□□□ -1.69
NUP116YMR047C ECM10P39987 644 aa4.47□□□□□ -1.69
NUP116YMR047C YKE4P40544 346 aa4.47□□□□□ -1.69
NUP116YMR047C EMC2P47133 292 aaKnown RBP4.47□□□□□ -1.69
NUP116YMR047C NOP19P53317 196 aaPredicted RBP4.47□□□□□ -1.69
NUP116YMR047C RSC9Q03124 581 aa4.47□□□□□ -1.69
NUP116YMR047C YPR127WQ06494 345 aa4.47□□□□□ -1.69
NUP116YMR047C RRP40Q08285 240 aaKnown RBP4.47□□□□□ -1.69
NUP116YMR047C YLR053CQ12026 108 aa4.47□□□□□ -1.69
NUP116YMR047C ATX2Q12067 313 aa4.47□□□□□ -1.69
NUP116YMR047C RPL7BQ12213 244 aaKnown RBP4.47□□□□□ -1.69
NUP116YMR047C SKS1Q12505 502 aa4.47□□□□□ -1.69
NUP116YMR047C CYR1P08678 2026 aaKnown RBP4.46□□□□□ -1.69
NUP116YMR047C RPP1BP10622 106 aaKnown RBP4.46□□□□□ -1.69
NUP116YMR047C PET54P10834 293 aa4.46□□□□□ -1.69
NUP116YMR047C DEG1P31115 442 aaKnown RBP4.46□□□□□ -1.69
NUP116YMR047C BCK2P33306 851 aa4.46□□□□□ -1.69
NUP116YMR047C LOT5P34234 306 aa4.46□□□□□ -1.69
NUP116YMR047C SPC34P36131 295 aa4.46□□□□□ -1.69
NUP116YMR047C PHO89P38361 574 aa4.46□□□□□ -1.69
NUP116YMR047C BIG1P38813 335 aa4.46□□□□□ -1.69
NUP116YMR047C OTU1P43558 301 aa4.46□□□□□ -1.69
NUP116YMR047C ERV14P53173 138 aa4.46□□□□□ -1.69
NUP116YMR047C NUP116Q02630 1113 aa4.46□□□□□ -1.69
NUP116YMR047C YPL071CQ02864 156 aa4.46□□□□□ -1.69
NUP116YMR047C YOR214CQ12282 236 aa4.46□□□□□ -1.69
NUP116YMR047C BAR1P12630 587 aa4.46□□□□□ -1.7
NUP116YMR047C PUP1P25043 261 aa4.46□□□□□ -1.7
NUP116YMR047C AAR2P32357 355 aaPredicted RBP4.46□□□□□ -1.7
NUP116YMR047C UGX2P32772 223 aa4.46□□□□□ -1.7
NUP116YMR047C MRPL3P36516 390 aa4.46□□□□□ -1.7
NUP116YMR047C YPK3P38070 525 aa4.46□□□□□ -1.7
NUP116YMR047C MOH1P38191 138 aa4.46□□□□□ -1.7
NUP116YMR047C TIF11P38912 153 aaKnown RBP4.46□□□□□ -1.7
NUP116YMR047C VPS52P39904 641 aa4.46□□□□□ -1.7
NUP116YMR047C GPP2P40106 250 aaKnown RBP4.46□□□□□ -1.7
NUP116YMR047C PRM2P40534 656 aa4.46□□□□□ -1.7
NUP116YMR047C ERG26P53199 349 aaKnown RBP4.46□□□□□ -1.7
NUP116YMR047C BIO4P53630 237 aa4.46□□□□□ -1.7
NUP116YMR047C PRM15Q03262 622 aa4.46□□□□□ -1.7
NUP116YMR047C YDR391CQ04170 232 aa4.46□□□□□ -1.7
NUP116YMR047C VPS74Q06385 345 aa4.46□□□□□ -1.7
NUP116YMR047C MDM32Q12171 622 aa4.46□□□□□ -1.7
NUP116YMR047C RGT2Q12300 763 aa4.46□□□□□ -1.7
NUP116YMR047C PHO2P07269 559 aa4.46□□□□□ -1.7
NUP116YMR047C ADH5P38113 351 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 24 ms