RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C YKL070WP36087 169 aa1.54□□□□□ -2.16
SGD1YLR336C FRT2P39734 528 aa1.54□□□□□ -2.16
SGD1YLR336C GPI8P49018 411 aa1.54□□□□□ -2.16
SGD1YLR336C ACT1P60010 375 aaKnown RBP1.54□□□□□ -2.16
SGD1YLR336C GMC1Q04399 608 aa1.54□□□□□ -2.16
SGD1YLR336C LAG2Q92325 660 aa1.54□□□□□ -2.16
SGD1YLR336C SKG6P32900 734 aaPredicted RBP1.54□□□□□ -2.16
SGD1YLR336C TRR2P38816 342 aa1.54□□□□□ -2.16
SGD1YLR336C VAB2P40003 282 aa1.54□□□□□ -2.16
SGD1YLR336C SHQ1P40486 507 aaPredicted RBP1.54□□□□□ -2.16
SGD1YLR336C SMD1Q02260 146 aaPredicted RBP1.54□□□□□ -2.16
SGD1YLR336C DIB1Q06819 143 aaPredicted RBP1.54□□□□□ -2.16
SGD1YLR336C TRM10Q12400 293 aa1.54□□□□□ -2.16
SGD1YLR336C IZH4Q99393 312 aa1.54□□□□□ -2.16
SGD1YLR336C ATP6P00854 259 aa1.53□□□□□ -2.16
SGD1YLR336C HPR1P17629 752 aaKnown RBP1.53□□□□□ -2.16
SGD1YLR336C CPT1P17898 393 aa1.53□□□□□ -2.16
SGD1YLR336C ZIP1P31111 875 aa1.53□□□□□ -2.16
SGD1YLR336C YKL063CP35725 167 aa1.53□□□□□ -2.16
SGD1YLR336C HIS2P38635 335 aa1.53□□□□□ -2.16
SGD1YLR336C MEP1P40260 492 aa1.53□□□□□ -2.16
SGD1YLR336C AGP3P43548 558 aa1.53□□□□□ -2.16
SGD1YLR336C GTO1P48239 356 aa1.53□□□□□ -2.16
SGD1YLR336C YGL118CP53132 145 aa1.53□□□□□ -2.16
SGD1YLR336C SWC4P53201 476 aa1.53□□□□□ -2.16
SGD1YLR336C ASR1Q06834 288 aa1.53□□□□□ -2.16
SGD1YLR336C TFC7Q12415 435 aa1.53□□□□□ -2.16
SGD1YLR336C RPC40P07703 335 aaKnown RBP1.53□□□□□ -2.16
SGD1YLR336C FRS2P15625 503 aaKnown RBP1.53□□□□□ -2.16
SGD1YLR336C SLX1P38324 304 aa1.53□□□□□ -2.16
SGD1YLR336C MND1P53102 219 aa1.53□□□□□ -2.16
SGD1YLR336C YNL260CP53846 198 aa1.53□□□□□ -2.16
SGD1YLR336C YNL050CP53952 270 aa1.53□□□□□ -2.16
SGD1YLR336C PEX30Q06169 523 aa1.53□□□□□ -2.16
SGD1YLR336C ERP3Q12403 225 aa1.53□□□□□ -2.16
SGD1YLR336C YAL063C-AQ3E791 96 aa1.53□□□□□ -2.16
SGD1YLR336C SPA2P23201 1466 aaKnown RBP1.53□□□□□ -2.16
SGD1YLR336C CKA2P19454 339 aa1.53□□□□□ -2.17
SGD1YLR336C TPS2P31688 896 aaKnown RBP1.53□□□□□ -2.17
SGD1YLR336C TPO5P36029 618 aa1.53□□□□□ -2.17
SGD1YLR336C RPC37P36121 282 aa1.53□□□□□ -2.17
SGD1YLR336C FMP33P46998 180 aa1.53□□□□□ -2.17
SGD1YLR336C CAX4P53223 239 aa1.53□□□□□ -2.17
SGD1YLR336C YNL040WP53960 456 aaPredicted RBP1.53□□□□□ -2.17
SGD1YLR336C EGD1Q02642 157 aaKnown RBP1.53□□□□□ -2.17
SGD1YLR336C YPL077CQ02831 240 aa1.53□□□□□ -2.17
SGD1YLR336C YPL278CQ08990 100 aa1.53□□□□□ -2.17
SGD1YLR336C PRP46Q12417 451 aaPredicted RBP1.53□□□□□ -2.17
SGD1YLR336C FMP16Q12497 93 aa1.53□□□□□ -2.17
SGD1YLR336C CDC42P19073 191 aa1.52□□□□□ -2.17
SGD1YLR336C AGA2P32781 87 aa1.52□□□□□ -2.17
SGD1YLR336C CDC13P32797 924 aaKnown RBP1.52□□□□□ -2.17
SGD1YLR336C YIL054WP40524 105 aa1.52□□□□□ -2.17
SGD1YLR336C PFS2P42841 465 aaKnown RBP1.52□□□□□ -2.17
SGD1YLR336C MIC19P43594 170 aa1.52□□□□□ -2.17
SGD1YLR336C VIK1Q12045 647 aa1.52□□□□□ -2.17
SGD1YLR336C POM33Q12164 279 aa1.52□□□□□ -2.17
SGD1YLR336C YPR064WQ12492 139 aa1.52□□□□□ -2.17
SGD1YLR336C TFS1P14306 219 aa1.52□□□□□ -2.17
SGD1YLR336C DAL5P15365 543 aa1.52□□□□□ -2.17
SGD1YLR336C FMT1P32785 401 aa1.52□□□□□ -2.17
SGD1YLR336C SPT4P32914 102 aaPredicted RBP1.52□□□□□ -2.17
SGD1YLR336C MBA1P38300 278 aa1.52□□□□□ -2.17
SGD1YLR336C MPP10P47083 593 aaKnown RBP1.52□□□□□ -2.17
SGD1YLR336C YPT32P51996 222 aaKnown RBP1.52□□□□□ -2.17
SGD1YLR336C ZRG17P53735 605 aa1.52□□□□□ -2.17
SGD1YLR336C BCP1Q06338 283 aa1.52□□□□□ -2.17
SGD1YLR336C YOR114WQ12219 294 aa1.52□□□□□ -2.17
SGD1YLR336C YIL002W-AQ3E7Z5 69 aa1.52□□□□□ -2.17
SGD1YLR336C OM45P16547 393 aa1.51□□□□□ -2.17
SGD1YLR336C RPS0AP32905 252 aaKnown RBP1.51□□□□□ -2.17
SGD1YLR336C ASP1P38986 381 aaPredicted RBP1.51□□□□□ -2.17
SGD1YLR336C TPN1P53099 579 aa1.51□□□□□ -2.17
SGD1YLR336C APJ1P53940 528 aa1.51□□□□□ -2.17
SGD1YLR336C CDC14Q00684 551 aa1.51□□□□□ -2.17
SGD1YLR336C LOA1Q06508 300 aa1.51□□□□□ -2.17
SGD1YLR336C BER1Q06688 274 aaKnown RBP1.51□□□□□ -2.17
SGD1YLR336C RRP42Q12277 265 aaPredicted RBP1.51□□□□□ -2.17
SGD1YLR336C RRP36Q12481 300 aaPredicted RBP1.51□□□□□ -2.17
SGD1YLR336C CUP2P15315 225 aa1.51□□□□□ -2.17
SGD1YLR336C DAL81P21657 970 aa1.51□□□□□ -2.17
SGD1YLR336C IFM1P25038 676 aa1.51□□□□□ -2.17
SGD1YLR336C RTT105P40063 208 aa1.51□□□□□ -2.17
SGD1YLR336C YIL012WP40551 113 aa1.51□□□□□ -2.17
SGD1YLR336C COS4P43542 379 aa1.51□□□□□ -2.17
SGD1YLR336C ASG7P46993 209 aa1.51□□□□□ -2.17
SGD1YLR336C KEL2P50090 882 aa1.51□□□□□ -2.17
SGD1YLR336C YPL113CQ02961 396 aa1.51□□□□□ -2.17
SGD1YLR336C GTO3Q04806 366 aa1.51□□□□□ -2.17
SGD1YLR336C DPP1Q05521 289 aa1.51□□□□□ -2.17
SGD1YLR336C YPL264CQ08980 353 aa1.51□□□□□ -2.17
SGD1YLR336C AEP1P32493 518 aa1.5□□□□□ -2.17
SGD1YLR336C MRPL6P32904 214 aa1.5□□□□□ -2.17
SGD1YLR336C EDC2P40023 145 aaPredicted RBP1.5□□□□□ -2.17
SGD1YLR336C VBA1Q04301 562 aa1.5□□□□□ -2.17
SGD1YLR336C VTI1Q04338 217 aa1.5□□□□□ -2.17
SGD1YLR336C YDR222WQ04925 415 aa1.5□□□□□ -2.17
SGD1YLR336C GPN3Q06543 272 aa1.5□□□□□ -2.17
SGD1YLR336C YPR195CQ06594 109 aa1.5□□□□□ -2.17
SGD1YLR336C SSA3P09435 649 aaKnown RBP1.5□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms