RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeastyeast

Gene SHB17, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHB17YKR043C NQM1P53228 333 aaPredicted RBP8.99□□□□□ -0.97
SHB17YKR043C GRX5Q02784 150 aa8.99□□□□□ -0.97
SHB17YKR043C SNZ1Q03148 297 aa8.99□□□□□ -0.97
SHB17YKR043C RRP9Q06506 573 aaKnown RBP8.99□□□□□ -0.97
SHB17YKR043C PST2Q12335 198 aaKnown RBP8.99□□□□□ -0.97
SHB17YKR043C PRB1P09232 635 aa8.98□□□□□ -0.97
SHB17YKR043C PRP21P32524 280 aaPredicted RBP8.98□□□□□ -0.97
SHB17YKR043C SSE2P32590 693 aaKnown RBP8.98□□□□□ -0.97
SHB17YKR043C PPG1P32838 368 aa8.98□□□□□ -0.97
SHB17YKR043C YBR063CP38083 404 aa8.98□□□□□ -0.97
SHB17YKR043C MAL32P38158 584 aa8.98□□□□□ -0.97
SHB17YKR043C AMN1P38285 549 aaPredicted RBP8.98□□□□□ -0.97
SHB17YKR043C VBA2P38358 474 aaKnown RBP8.98□□□□□ -0.97
SHB17YKR043C YGP1P38616 354 aaKnown RBP8.98□□□□□ -0.97
SHB17YKR043C SOP4P39543 234 aaPredicted RBP8.98□□□□□ -0.97
SHB17YKR043C MAL12P53341 584 aa8.98□□□□□ -0.97
SHB17YKR043C RVB1Q03940 463 aaKnown RBP8.98□□□□□ -0.97
SHB17YKR043C MRPL51Q06090 140 aaPredicted RBP8.98□□□□□ -0.97
SHB17YKR043C YDL114WQ07530 308 aa8.98□□□□□ -0.97
SHB17YKR043C YLR040CQ07988 224 aa8.98□□□□□ -0.97
SHB17YKR043C OPI3P05375 206 aa8.97□□□□□ -0.97
SHB17YKR043C SPS100P13130 326 aa8.97□□□□□ -0.97
SHB17YKR043C CPR2P23285 205 aa8.97□□□□□ -0.97
SHB17YKR043C STE50P25344 346 aa8.97□□□□□ -0.97
SHB17YKR043C EGD2P38879 174 aaKnown RBP8.97□□□□□ -0.97
SHB17YKR043C HIS6P40545 261 aa8.97□□□□□ -0.97
SHB17YKR043C RET2P43621 546 aa8.97□□□□□ -0.97
SHB17YKR043C DPB11P47027 764 aaPredicted RBP8.97□□□□□ -0.97
SHB17YKR043C YAP6Q03935 383 aa8.97□□□□□ -0.97
SHB17YKR043C MRL1Q06815 381 aa8.97□□□□□ -0.97
SHB17YKR043C YGR161W-CQ3E744 92 aa8.97□□□□□ -0.97
SHB17YKR043C URE2P23202 354 aaKnown RBP8.96□□□□□ -0.98
SHB17YKR043C MTR2P34232 184 aaKnown RBP8.96□□□□□ -0.98
SHB17YKR043C YMR144WP40214 342 aaKnown RBP8.96□□□□□ -0.98
SHB17YKR043C YIL165CP40446 119 aa8.96□□□□□ -0.98
SHB17YKR043C AVT7P40501 490 aa8.96□□□□□ -0.98
SHB17YKR043C SFH5P47008 294 aa8.96□□□□□ -0.98
SHB17YKR043C ACS2P52910 683 aaKnown RBP8.96□□□□□ -0.98
SHB17YKR043C BUD17P53727 317 aa8.96□□□□□ -0.98
SHB17YKR043C NUP49Q02199 472 aa8.96□□□□□ -0.98
SHB17YKR043C RCE1Q03530 315 aa8.96□□□□□ -0.98
SHB17YKR043C SSY1Q03770 852 aa8.96□□□□□ -0.98
SHB17YKR043C PCL9Q12477 304 aa8.96□□□□□ -0.98
SHB17YKR043C RPS16AP0CX51 143 aaKnown RBP8.95□□□□□ -0.98
SHB17YKR043C RPS16BP0CX52 143 aaKnown RBP8.95□□□□□ -0.98
SHB17YKR043C IDP1P21954 428 aaKnown RBP8.95□□□□□ -0.98
SHB17YKR043C CNA1P23287 553 aa8.95□□□□□ -0.98
SHB17YKR043C BCK2P33306 851 aa8.95□□□□□ -0.98
SHB17YKR043C MRPS5P33759 307 aa8.95□□□□□ -0.98
SHB17YKR043C PHO90P39535 881 aa8.95□□□□□ -0.98
SHB17YKR043C MOB2P43563 287 aa8.95□□□□□ -0.98
SHB17YKR043C IRC5P43610 853 aa8.95□□□□□ -0.98
SHB17YKR043C NIT3P49954 291 aa8.95□□□□□ -0.98
SHB17YKR043C SCY1P53009 804 aa8.95□□□□□ -0.98
SHB17YKR043C SLD3P53135 668 aa8.95□□□□□ -0.98
SHB17YKR043C HAS1Q03532 505 aaKnown RBP8.95□□□□□ -0.98
SHB17YKR043C ATG17Q06410 417 aa8.95□□□□□ -0.98
SHB17YKR043C RAS1P01119 309 aa8.94□□□□□ -0.98
SHB17YKR043C MSW1P04803 379 aa8.94□□□□□ -0.98
SHB17YKR043C SED4P25365 1065 aa8.94□□□□□ -0.98
SHB17YKR043C NDC1P32500 655 aa8.94□□□□□ -0.98
SHB17YKR043C YLF2P38746 405 aa8.94□□□□□ -0.98
SHB17YKR043C YNL165WP53891 406 aa8.94□□□□□ -0.98
SHB17YKR043C RPL6AQ02326 176 aaKnown RBP8.94□□□□□ -0.98
SHB17YKR043C TLG1Q03322 224 aa8.94□□□□□ -0.98
SHB17YKR043C YMR087WQ04299 284 aa8.94□□□□□ -0.98
SHB17YKR043C IPK1Q06667 281 aa8.94□□□□□ -0.98
SHB17YKR043C MCH4Q08268 501 aa8.94□□□□□ -0.98
SHB17YKR043C LSO1Q3E827 93 aa8.94□□□□□ -0.98
SHB17YKR043C KIN28P06242 306 aa8.93□□□□□ -0.98
SHB17YKR043C ITR1P30605 584 aa8.93□□□□□ -0.98
SHB17YKR043C TIF3P34167 436 aaKnown RBP8.93□□□□□ -0.98
SHB17YKR043C IPT1P38954 527 aa8.93□□□□□ -0.98
SHB17YKR043C AIM10P39965 576 aaKnown RBP8.93□□□□□ -0.98
SHB17YKR043C YER084WP40057 128 aa8.93□□□□□ -0.98
SHB17YKR043C PDS1P40316 373 aaPredicted RBP8.93□□□□□ -0.98
SHB17YKR043C MNT4P53745 580 aa8.93□□□□□ -0.98
SHB17YKR043C FIN1Q03898 291 aa8.93□□□□□ -0.98
SHB17YKR043C ACF2Q12168 779 aa8.93□□□□□ -0.98
SHB17YKR043C YGK3Q12222 375 aaPredicted RBP8.93□□□□□ -0.98
SHB17YKR043C RPS13P05756 151 aaKnown RBP8.92□□□□□ -0.98
SHB17YKR043C FPS1P23900 669 aa8.92□□□□□ -0.98
SHB17YKR043C SUR1P33300 382 aa8.92□□□□□ -0.98
SHB17YKR043C SRP102P36057 244 aaPredicted RBP8.92□□□□□ -0.98
SHB17YKR043C YHR035WP38769 630 aa8.92□□□□□ -0.98
SHB17YKR043C MDM31P38880 579 aa8.92□□□□□ -0.98
SHB17YKR043C SLZ1P40167 298 aa8.92□□□□□ -0.98
SHB17YKR043C MSS2P40990 351 aa8.92□□□□□ -0.98
SHB17YKR043C VOA1P53262 265 aa8.92□□□□□ -0.98
SHB17YKR043C ACS1Q01574 713 aa8.92□□□□□ -0.98
SHB17YKR043C RNH1Q04740 348 aa8.92□□□□□ -0.98
SHB17YKR043C YMR315WQ04869 349 aaKnown RBP8.92□□□□□ -0.98
SHB17YKR043C SYC1Q08553 188 aaPredicted RBP8.92□□□□□ -0.98
SHB17YKR043C NCE102Q12207 173 aaRIP-Chip data8.92□□□□□ -0.98not detected
SHB17YKR043C TY1A-BLQ12266 440 aa8.92□□□□□ -0.98
SHB17YKR043C RTN2Q12443 393 aa8.92□□□□□ -0.98
SHB17YKR043C STE18P18852 110 aa8.91□□□□□ -0.98
SHB17YKR043C KRR1P25586 316 aaPredicted RBP8.91□□□□□ -0.98
SHB17YKR043C ECM4P36156 370 aa8.91□□□□□ -0.98
SHB17YKR043C SSZ1P38788 538 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 67.8 ms