RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W YAR066WP0CX18 203 aa2.07□□□□□ -2.08
SNU114YKL173W YHR214WP0CX19 203 aa2.07□□□□□ -2.08
SNU114YKL173W CBS2P14905 389 aa2.07□□□□□ -2.08
SNU114YKL173W COQ1P18900 473 aa2.07□□□□□ -2.08
SNU114YKL173W SAM2P19358 384 aaKnown RBP2.07□□□□□ -2.08
SNU114YKL173W HMT1P38074 348 aa2.07□□□□□ -2.08
SNU114YKL173W URA8P38627 578 aaPredicted RBP2.07□□□□□ -2.08
SNU114YKL173W SOP4P39543 234 aaPredicted RBP2.07□□□□□ -2.08
SNU114YKL173W KEG1P43614 200 aa2.07□□□□□ -2.08
SNU114YKL173W TIS11P47977 285 aa2.07□□□□□ -2.08
SNU114YKL173W YPL080CQ02826 108 aa2.07□□□□□ -2.08
SNU114YKL173W PIR3Q03180 325 aa2.07□□□□□ -2.08
SNU114YKL173W RVB1Q03940 463 aaKnown RBP2.07□□□□□ -2.08
SNU114YKL173W VPS74Q06385 345 aa2.07□□□□□ -2.08
SNU114YKL173W GRE1Q08969 168 aa2.07□□□□□ -2.08
SNU114YKL173W AYT1Q12226 474 aa2.07□□□□□ -2.08
SNU114YKL173W YLR108CQ12259 485 aa2.07□□□□□ -2.08
SNU114YKL173W RPN6Q12377 434 aa2.07□□□□□ -2.08
SNU114YKL173W CSR2Q12734 1121 aa2.07□□□□□ -2.08
SNU114YKL173W NUP157P40064 1391 aaKnown RBP2.07□□□□□ -2.08
SNU114YKL173W CYC3P06182 269 aa2.07□□□□□ -2.08
SNU114YKL173W EXO70P19658 623 aa2.07□□□□□ -2.08
SNU114YKL173W ISY1P21374 235 aaPredicted RBP2.07□□□□□ -2.08
SNU114YKL173W VPH2P32341 215 aa2.07□□□□□ -2.08
SNU114YKL173W COX13P32799 129 aa2.07□□□□□ -2.08
SNU114YKL173W TAF14P35189 244 aa2.07□□□□□ -2.08
SNU114YKL173W MIX23P38162 196 aa2.07□□□□□ -2.08
SNU114YKL173W BMT2P38278 337 aa2.07□□□□□ -2.08
SNU114YKL173W HIS2P38635 335 aa2.07□□□□□ -2.08
SNU114YKL173W YHK8P38776 514 aa2.07□□□□□ -2.08
SNU114YKL173W THO1P40040 218 aaKnown RBP2.07□□□□□ -2.08
SNU114YKL173W DIG1Q03063 452 aaKnown RBP2.07□□□□□ -2.08
SNU114YKL173W YMR181CQ03231 154 aa2.07□□□□□ -2.08
SNU114YKL173W BNA7Q04066 261 aa2.07□□□□□ -2.08
SNU114YKL173W CSM4Q08955 156 aa2.07□□□□□ -2.08
SNU114YKL173W YOR029WQ12243 111 aa2.07□□□□□ -2.08
SNU114YKL173W NOT5Q12514 560 aaPredicted RBP2.07□□□□□ -2.08
SNU114YKL173W YRF1-3P0CX14 1859 aa2.07□□□□□ -2.08
SNU114YKL173W YRF1-7P0CX15 1859 aa2.07□□□□□ -2.08
SNU114YKL173W YRF1-6P53819 1859 aa2.07□□□□□ -2.08
SNU114YKL173W ATP6P00854 259 aa2.07□□□□□ -2.08
SNU114YKL173W VMA5P31412 392 aaKnown RBP2.07□□□□□ -2.08
SNU114YKL173W GCG1P32656 232 aaKnown RBP2.07□□□□□ -2.08
SNU114YKL173W RFT1P38206 574 aaPredicted RBP2.07□□□□□ -2.08
SNU114YKL173W AME1P38313 324 aa2.07□□□□□ -2.08
SNU114YKL173W HEM14P40012 539 aa2.07□□□□□ -2.08
SNU114YKL173W SFH5P47008 294 aa2.07□□□□□ -2.08
SNU114YKL173W IKS1P47042 667 aa2.07□□□□□ -2.08
SNU114YKL173W RTT101P47050 842 aa2.07□□□□□ -2.08
SNU114YKL173W KAP114P53067 1004 aa2.07□□□□□ -2.08
SNU114YKL173W SSU72P53538 206 aaPredicted RBP2.07□□□□□ -2.08
SNU114YKL173W RCF2P53721 224 aa2.07□□□□□ -2.08
SNU114YKL173W YMR317WQ04893 1140 aa2.07□□□□□ -2.08
SNU114YKL173W DCR2Q05924 578 aa2.07□□□□□ -2.08
SNU114YKL173W RPL24AP04449 155 aaKnown RBP2.06□□□□□ -2.08
SNU114YKL173W RPS3P05750 240 aaKnown RBP2.06□□□□□ -2.08
SNU114YKL173W RHO1P06780 209 aaKnown RBP2.06□□□□□ -2.08
SNU114YKL173W CDC33P07260 213 aaKnown RBP2.06□□□□□ -2.08
SNU114YKL173W CSM1P25651 190 aa2.06□□□□□ -2.08
SNU114YKL173W TIR2P33890 251 aa2.06□□□□□ -2.08
SNU114YKL173W RIB1P38066 345 aa2.06□□□□□ -2.08
SNU114YKL173W MAL32P38158 584 aa2.06□□□□□ -2.08
SNU114YKL173W SEC72P39742 193 aaKnown RBP2.06□□□□□ -2.08
SNU114YKL173W PHB1P40961 287 aa2.06□□□□□ -2.08
SNU114YKL173W MAL12P53341 584 aa2.06□□□□□ -2.08
SNU114YKL173W YNL140CP53910 189 aa2.06□□□□□ -2.08
SNU114YKL173W CTF19Q02732 369 aa2.06□□□□□ -2.08
SNU114YKL173W YMR209CQ03648 457 aa2.06□□□□□ -2.08
SNU114YKL173W ARO80Q04052 950 aa2.06□□□□□ -2.08
SNU114YKL173W YDL114WQ07530 308 aa2.06□□□□□ -2.08
SNU114YKL173W SHS1Q07657 551 aa2.06□□□□□ -2.08
SNU114YKL173W SIA1Q12212 622 aa2.06□□□□□ -2.08
SNU114YKL173W SET6Q12529 373 aa2.06□□□□□ -2.08
SNU114YKL173W QCR7P00128 127 aa2.06□□□□□ -2.08
SNU114YKL173W PHO2P07269 559 aa2.06□□□□□ -2.08
SNU114YKL173W DCC1P25559 380 aa2.06□□□□□ -2.08
SNU114YKL173W ERG9P29704 444 aa2.06□□□□□ -2.08
SNU114YKL173W SPS19P32573 292 aaKnown RBP2.06□□□□□ -2.08
SNU114YKL173W GEP4P38812 185 aa2.06□□□□□ -2.08
SNU114YKL173W OST1P41543 476 aaKnown RBP2.06□□□□□ -2.08
SNU114YKL173W GAB1P41733 394 aa2.06□□□□□ -2.08
SNU114YKL173W CIN2P46670 268 aa2.06□□□□□ -2.08
SNU114YKL173W RPC17P47076 161 aa2.06□□□□□ -2.08
SNU114YKL173W COX16P47081 118 aa2.06□□□□□ -2.08
SNU114YKL173W POP6P53218 158 aa2.06□□□□□ -2.08
SNU114YKL173W NOP19P53317 196 aaPredicted RBP2.06□□□□□ -2.08
SNU114YKL173W HER2Q03557 464 aa2.06□□□□□ -2.08
SNU114YKL173W KRE28Q04431 385 aa2.06□□□□□ -2.08
SNU114YKL173W PBP4Q07362 185 aaKnown RBP2.06□□□□□ -2.08
SNU114YKL173W YPD1Q07688 167 aa2.06□□□□□ -2.08
SNU114YKL173W YPR1Q12458 312 aa2.06□□□□□ -2.08
SNU114YKL173W RAD9P14737 1309 aa2.06□□□□□ -2.08
SNU114YKL173W RPP0P05317 312 aaKnown RBP2.05□□□□□ -2.08
SNU114YKL173W RPL15AP05748 204 aaKnown RBP2.05□□□□□ -2.08
SNU114YKL173W RAD3P06839 778 aa2.05□□□□□ -2.08
SNU114YKL173W RRT12P25381 491 aa2.05□□□□□ -2.08
SNU114YKL173W UBC8P28263 218 aa2.05□□□□□ -2.08
SNU114YKL173W RCK2P38623 610 aa2.05□□□□□ -2.08
SNU114YKL173W BIG1P38813 335 aa2.05□□□□□ -2.08
SNU114YKL173W PFS1P38872 237 aa2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms