RNA–Protein interactions for RNA: YKL125W

RRN3, Transcript of Protein required for transcription of rDNA by RNA polymerase I, yeast

Gene RRN3, Length 1,884 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRN3	YKL125W	RPS9A	O13516	197 aa	Known RBP	4.92	□□□□□ -1.62
RRN3	YKL125W	COX2	P00410	251 aa		4.92	□□□□□ -1.62
RRN3	YKL125W	RPS9B	P05755	195 aa	Known RBP	4.92	□□□□□ -1.62
RRN3	YKL125W	CDC33	P07260	213 aa	Known RBP	4.92	□□□□□ -1.62
RRN3	YKL125W	BUD5	P25300	642 aa	Predicted RBP	4.92	□□□□□ -1.62
RRN3	YKL125W	VBA3	P25594	458 aa		4.92	□□□□□ -1.62
RRN3	YKL125W	STP22	P25604	385 aa		4.92	□□□□□ -1.62
RRN3	YKL125W	ARE1	P25628	610 aa		4.92	□□□□□ -1.62
RRN3	YKL125W	ARP2	P32381	391 aa	Known RBP	4.92	□□□□□ -1.62
RRN3	YKL125W	SKG6	P32900	734 aa	Predicted RBP	4.92	□□□□□ -1.62
RRN3	YKL125W	TMA19	P35691	167 aa	Known RBP	4.92	□□□□□ -1.62
RRN3	YKL125W	YBL029W	P38201	376 aa		4.92	□□□□□ -1.62
RRN3	YKL125W	YHR035W	P38769	630 aa		4.92	□□□□□ -1.62
RRN3	YKL125W	YIL152W	P40455	235 aa		4.92	□□□□□ -1.62
RRN3	YKL125W	FET4	P40988	552 aa		4.92	□□□□□ -1.62
RRN3	YKL125W	YFL012W	P43580	148 aa		4.92	□□□□□ -1.62
RRN3	YKL125W	MDM34	P53083	459 aa		4.92	□□□□□ -1.62
RRN3	YKL125W	DIG2	Q03373	323 aa	Known RBP	4.92	□□□□□ -1.62
RRN3	YKL125W	GMC1	Q04399	608 aa		4.92	□□□□□ -1.62
RRN3	YKL125W	YMR034C	Q05131	434 aa	Predicted RBP	4.92	□□□□□ -1.62
RRN3	YKL125W	ANT1	Q06497	328 aa		4.92	□□□□□ -1.62
RRN3	YKL125W	AIM39	Q08223	395 aa		4.92	□□□□□ -1.62
RRN3	YKL125W	TMA17	Q12513	150 aa		4.92	□□□□□ -1.62
RRN3	YKL125W	CTF3	Q12748	733 aa		4.92	□□□□□ -1.62
RRN3	YKL125W	YMR030W-A	Q3E760	96 aa		4.92	□□□□□ -1.62
RRN3	YKL125W	YNR034W-A	Q3E841	98 aa		4.92	□□□□□ -1.62
RRN3	YKL125W	NHP6B	P11633	99 aa	Known RBP	4.92	□□□□□ -1.62
RRN3	YKL125W	ERD1	P16151	362 aa		4.92	□□□□□ -1.62
RRN3	YKL125W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
RRN3	YKL125W	AFG1	P32317	509 aa		4.92	□□□□□ -1.62
RRN3	YKL125W	BCS1	P32839	456 aa		4.92	□□□□□ -1.62
RRN3	YKL125W	CLB6	P32943	380 aa		4.92	□□□□□ -1.62
RRN3	YKL125W	DOA1	P36037	715 aa		4.92	□□□□□ -1.62
RRN3	YKL125W	FLR1	P38124	548 aa		4.92	□□□□□ -1.62
RRN3	YKL125W	FAT1	P38225	669 aa		4.92	□□□□□ -1.62
RRN3	YKL125W	AME1	P38313	324 aa		4.92	□□□□□ -1.62
RRN3	YKL125W	SMB1	P40018	196 aa	Known RBP	4.92	□□□□□ -1.62
RRN3	YKL125W	GWT1	P47026	490 aa		4.92	□□□□□ -1.62
RRN3	YKL125W	GCV1	P48015	400 aa		4.92	□□□□□ -1.62
RRN3	YKL125W	YGL114W	P53134	725 aa		4.92	□□□□□ -1.62
RRN3	YKL125W	UGO1	Q03327	502 aa		4.92	□□□□□ -1.62
RRN3	YKL125W	GAS3	Q03655	524 aa		4.92	□□□□□ -1.62
RRN3	YKL125W	PLB2	Q03674	706 aa		4.92	□□□□□ -1.62
RRN3	YKL125W	CSM3	Q04659	317 aa		4.92	□□□□□ -1.62
RRN3	YKL125W	RNH202	Q05635	350 aa		4.92	□□□□□ -1.62
RRN3	YKL125W	TPO3	Q06451	622 aa		4.92	□□□□□ -1.62
RRN3	YKL125W	TEN1	Q07921	160 aa		4.92	□□□□□ -1.62
RRN3	YKL125W	YLR036C	Q07986	203 aa		4.92	□□□□□ -1.62
RRN3	YKL125W	AHA1	Q12449	350 aa	Known RBP	4.92	□□□□□ -1.62
RRN3	YKL125W	YOR304C-A	O14468	76 aa		4.91	□□□□□ -1.62
RRN3	YKL125W	COX5B	P00425	151 aa		4.91	□□□□□ -1.62
RRN3	YKL125W	ERG20	P08524	352 aa	Known RBP	4.91	□□□□□ -1.62
RRN3	YKL125W	SRM1	P21827	482 aa		4.91	□□□□□ -1.62
RRN3	YKL125W	PPH21	P23594	369 aa		4.91	□□□□□ -1.62
RRN3	YKL125W	STE50	P25344	346 aa		4.91	□□□□□ -1.62
RRN3	YKL125W	PHO91	P27514	894 aa		4.91	□□□□□ -1.62
RRN3	YKL125W	YOX1	P34161	385 aa		4.91	□□□□□ -1.62
RRN3	YKL125W	YPT53	P36019	220 aa		4.91	□□□□□ -1.62
RRN3	YKL125W	YKL151C	P36059	337 aa		4.91	□□□□□ -1.62
RRN3	YKL125W	NTC20	P38302	140 aa	Predicted RBP	4.91	□□□□□ -1.62
RRN3	YKL125W	MUP3	P38734	546 aa		4.91	□□□□□ -1.62
RRN3	YKL125W	CRP1	P38845	465 aa	Known RBP	4.91	□□□□□ -1.62
RRN3	YKL125W	GDS1	P41913	522 aa		4.91	□□□□□ -1.62
RRN3	YKL125W	YGL101W	P53144	215 aa		4.91	□□□□□ -1.62
RRN3	YKL125W	COQ6	P53318	479 aa		4.91	□□□□□ -1.62
RRN3	YKL125W	FMP41	P53889	259 aa	Known RBP	4.91	□□□□□ -1.62
RRN3	YKL125W	UPS3	Q04006	179 aa		4.91	□□□□□ -1.62
RRN3	YKL125W	YLR346C	Q06139	101 aa		4.91	□□□□□ -1.62
RRN3	YKL125W	MRX9	Q07349	420 aa	Known RBP	4.91	□□□□□ -1.62
RRN3	YKL125W	CRT10	Q08226	957 aa		4.91	□□□□□ -1.62
RRN3	YKL125W	BSC6	Q08280	497 aa		4.91	□□□□□ -1.62
RRN3	YKL125W	GPM2	Q12008	311 aa		4.91	□□□□□ -1.62
RRN3	YKL125W	AIM45	Q12480	344 aa	Known RBP	4.91	□□□□□ -1.62
RRN3	YKL125W	COA6	Q3E846	104 aa		4.91	□□□□□ -1.62
RRN3	YKL125W	MRP10	O75012	95 aa		4.9	□□□□□ -1.62
RRN3	YKL125W	DED1	P06634	604 aa	Known RBP	4.9	□□□□□ -1.62
RRN3	YKL125W	HAP3	P13434	144 aa		4.9	□□□□□ -1.62
RRN3	YKL125W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.62	not detected
RRN3	YKL125W	EPT1	P22140	391 aa		4.9	□□□□□ -1.62
RRN3	YKL125W	RER1	P25560	188 aa		4.9	□□□□□ -1.62
RRN3	YKL125W	NTH1	P32356	751 aa		4.9	□□□□□ -1.62
RRN3	YKL125W	MRP20	P32387	263 aa		4.9	□□□□□ -1.62
RRN3	YKL125W	TRS65	P32893	560 aa		4.9	□□□□□ -1.62
RRN3	YKL125W	ADD66	P36040	267 aa		4.9	□□□□□ -1.62
RRN3	YKL125W	RPF1	P38805	295 aa	Known RBP	4.9	□□□□□ -1.62
RRN3	YKL125W	ALP1	P38971	573 aa		4.9	□□□□□ -1.62
RRN3	YKL125W	IME4	P41833	600 aa		4.9	□□□□□ -1.62
RRN3	YKL125W	YGR126W	P53274	230 aa		4.9	□□□□□ -1.62
RRN3	YKL125W	DUS1	P53759	423 aa	Known RBP	4.9	□□□□□ -1.62
RRN3	YKL125W	GPI15	P53961	229 aa		4.9	□□□□□ -1.62
RRN3	YKL125W	AAT1	Q01802	451 aa		4.9	□□□□□ -1.62
RRN3	YKL125W	VPS28	Q02767	242 aa		4.9	□□□□□ -1.62
RRN3	YKL125W	GIP3	Q03016	1276 aa		4.9	□□□□□ -1.62
RRN3	YKL125W	CGI121	Q03705	181 aa	Known RBP	4.9	□□□□□ -1.62
RRN3	YKL125W	YMR130W	Q04223	302 aa		4.9	□□□□□ -1.62
RRN3	YKL125W	ATG39	Q06159	398 aa		4.9	□□□□□ -1.62
RRN3	YKL125W	MRPL35	Q06678	367 aa		4.9	□□□□□ -1.62
RRN3	YKL125W	CSI2	Q08054	341 aa		4.9	□□□□□ -1.62
RRN3	YKL125W	YDR262W	Q12331	272 aa		4.9	□□□□□ -1.62
RRN3	YKL125W	SST2	P11972	698 aa	Known RBP	4.9	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms