RNA–Protein interactions for RNA: YKL039W

PTM1, Transcript of Protein of unknown function, yeastyeast

Gene PTM1, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTM1YKL039W VPS3P23643 1011 aa3.36□□□□□ -1.87
PTM1YKL039W DPB2P24482 689 aaPredicted RBP3.36□□□□□ -1.87
PTM1YKL039W CHA1P25379 360 aaKnown RBP3.36□□□□□ -1.87
PTM1YKL039W RIB7P33312 244 aa3.36□□□□□ -1.87
PTM1YKL039W SRL3P36167 246 aa3.36□□□□□ -1.87
PTM1YKL039W MMS21P38632 267 aa3.36□□□□□ -1.87
PTM1YKL039W HIS2P38635 335 aa3.36□□□□□ -1.87
PTM1YKL039W RBL2P48606 106 aaKnown RBP3.36□□□□□ -1.87
PTM1YKL039W YGR018CP53211 109 aa3.36□□□□□ -1.87
PTM1YKL039W YKR005CQ02203 525 aa3.36□□□□□ -1.87
PTM1YKL039W CWC21Q03375 135 aaKnown RBP3.36□□□□□ -1.87
PTM1YKL039W VHS1Q03785 461 aa3.36□□□□□ -1.87
PTM1YKL039W SXM1Q04175 944 aaKnown RBP3.36□□□□□ -1.87
PTM1YKL039W YLH47Q06493 454 aa3.36□□□□□ -1.87
PTM1YKL039W MEU1Q07938 337 aaKnown RBP RIP-Chip data3.36□□□□□ -1.87not detected
PTM1YKL039W RRP7P25368 297 aaPredicted RBP3.35□□□□□ -1.87
PTM1YKL039W RPS0AP32905 252 aaKnown RBP3.35□□□□□ -1.87
PTM1YKL039W MDL1P33310 695 aa3.35□□□□□ -1.87
PTM1YKL039W GPI18P38211 433 aa3.35□□□□□ -1.87
PTM1YKL039W IGD1P43598 195 aa3.35□□□□□ -1.87
PTM1YKL039W NUP84P52891 726 aa3.35□□□□□ -1.87
PTM1YKL039W MIG2P53035 382 aa3.35□□□□□ -1.87
PTM1YKL039W LSG1P53145 640 aaKnown RBP3.35□□□□□ -1.87
PTM1YKL039W YGR016WP53209 190 aa3.35□□□□□ -1.87
PTM1YKL039W PGA2P53903 129 aa3.35□□□□□ -1.87
PTM1YKL039W SRL4Q03085 281 aa3.35□□□□□ -1.87
PTM1YKL039W BCP1Q06338 283 aa3.35□□□□□ -1.87
PTM1YKL039W CUR1Q06469 252 aa3.35□□□□□ -1.87
PTM1YKL039W YPQ1Q12010 308 aa3.35□□□□□ -1.87
PTM1YKL039W GLE1Q12315 538 aa3.35□□□□□ -1.87
PTM1YKL039W SRN2Q99176 213 aa3.35□□□□□ -1.87
PTM1YKL039W ADH1P00330 348 aaKnown RBP3.34□□□□□ -1.87
PTM1YKL039W CBP6P07253 162 aaPredicted RBP3.34□□□□□ -1.87
PTM1YKL039W AST1P35183 429 aa3.34□□□□□ -1.87
PTM1YKL039W KDX1P36005 433 aa3.34□□□□□ -1.87
PTM1YKL039W MRPL27P36526 146 aaPredicted RBP3.34□□□□□ -1.87
PTM1YKL039W MRPS9P38120 278 aa3.34□□□□□ -1.87
PTM1YKL039W POP4P38336 279 aa3.34□□□□□ -1.87
PTM1YKL039W END3P39013 349 aa3.34□□□□□ -1.87
PTM1YKL039W FRT2P39734 528 aa3.34□□□□□ -1.87
PTM1YKL039W HEM14P40012 539 aa3.34□□□□□ -1.87
PTM1YKL039W STB1P42845 420 aa3.34□□□□□ -1.87
PTM1YKL039W TRF5P48561 642 aaKnown RBP3.34□□□□□ -1.87
PTM1YKL039W MKC7P53379 596 aa3.34□□□□□ -1.87
PTM1YKL039W REX2P54964 269 aaKnown RBP3.34□□□□□ -1.87
PTM1YKL039W YLR297WQ05899 129 aa3.34□□□□□ -1.87
PTM1YKL039W GET4Q12125 312 aa3.34□□□□□ -1.87
PTM1YKL039W RRP36Q12481 300 aaPredicted RBP3.34□□□□□ -1.87
PTM1YKL039W YAK1P14680 807 aa3.34□□□□□ -1.88
PTM1YKL039W GIT1P25346 518 aa3.34□□□□□ -1.88
PTM1YKL039W RPS5P26783 225 aaKnown RBP3.34□□□□□ -1.88
PTM1YKL039W UTP11P34247 250 aaPredicted RBP3.34□□□□□ -1.88
PTM1YKL039W YBR032WP38223 100 aa3.34□□□□□ -1.88
PTM1YKL039W SHE3P38272 425 aaKnown RBP3.34□□□□□ -1.88
PTM1YKL039W LSM12P38828 187 aaKnown RBP3.34□□□□□ -1.88
PTM1YKL039W GDI1P39958 451 aaKnown RBP3.34□□□□□ -1.88
PTM1YKL039W LIA1P47120 325 aaKnown RBP3.34□□□□□ -1.88
PTM1YKL039W GAT3Q07928 141 aa3.34□□□□□ -1.88
PTM1YKL039W NFI1Q12216 726 aa3.34□□□□□ -1.88
PTM1YKL039W CMD1P06787 147 aaKnown RBP3.33□□□□□ -1.88
PTM1YKL039W GCN3P14741 305 aa3.33□□□□□ -1.88
PTM1YKL039W YMR134WP40207 237 aa3.33□□□□□ -1.88
PTM1YKL039W OSW5P40219 148 aa3.33□□□□□ -1.88
PTM1YKL039W CIN2P46670 268 aa3.33□□□□□ -1.88
PTM1YKL039W YGL262WP53054 175 aa3.33□□□□□ -1.88
PTM1YKL039W USE1P53146 245 aa3.33□□□□□ -1.88
PTM1YKL039W ORM1P53224 222 aa3.33□□□□□ -1.88
PTM1YKL039W RCF1Q03713 159 aa3.33□□□□□ -1.88
PTM1YKL039W ENT5Q03769 411 aaKnown RBP3.33□□□□□ -1.88
PTM1YKL039W FMN1Q03778 218 aa3.33□□□□□ -1.88
PTM1YKL039W MGR3Q04472 501 aa3.33□□□□□ -1.88
PTM1YKL039W SHS1Q07657 551 aa3.33□□□□□ -1.88
PTM1YKL039W ADF1Q2V2Q1 113 aa3.33□□□□□ -1.88
PTM1YKL039W ACC1Q00955 2233 aaKnown RBP3.32□□□□□ -1.88
PTM1YKL039W CDC33P07260 213 aaKnown RBP3.32□□□□□ -1.88
PTM1YKL039W RPS18AP0CX55 146 aaKnown RBP3.32□□□□□ -1.88
PTM1YKL039W RPS18BP0CX56 146 aaPredicted RBP3.32□□□□□ -1.88
PTM1YKL039W RPL4AP10664 362 aaKnown RBP3.32□□□□□ -1.88
PTM1YKL039W CBF1P17106 351 aa3.32□□□□□ -1.88
PTM1YKL039W CMK2P22517 447 aa3.32□□□□□ -1.88
PTM1YKL039W PEX5P35056 612 aa3.32□□□□□ -1.88
PTM1YKL039W ATG12P38316 186 aa3.32□□□□□ -1.88
PTM1YKL039W TRM5P38793 499 aa3.32□□□□□ -1.88
PTM1YKL039W SEC28P40509 296 aaKnown RBP3.32□□□□□ -1.88
PTM1YKL039W RPL4BP49626 362 aaKnown RBP3.32□□□□□ -1.88
PTM1YKL039W VHT1P53241 593 aa3.32□□□□□ -1.88
PTM1YKL039W VAC7P53950 1165 aa3.32□□□□□ -1.88
PTM1YKL039W TPS1Q00764 495 aaKnown RBP3.32□□□□□ -1.88
PTM1YKL039W PLP1Q04004 230 aa3.32□□□□□ -1.88
PTM1YKL039W YMR226CQ05016 267 aaKnown RBP3.32□□□□□ -1.88
PTM1YKL039W GPM2Q12008 311 aa3.32□□□□□ -1.88
PTM1YKL039W YLR053CQ12026 108 aa3.32□□□□□ -1.88
PTM1YKL039W FOL3Q12676 427 aaPredicted RBP3.32□□□□□ -1.88
PTM1YKL039W STE7P06784 515 aa3.31□□□□□ -1.88
PTM1YKL039W ASP3-2P0CX77 362 aa3.31□□□□□ -1.88
PTM1YKL039W ASP3-3P0CX78 362 aa3.31□□□□□ -1.88
PTM1YKL039W ASP3-4P0CX79 362 aa3.31□□□□□ -1.88
PTM1YKL039W ASP3-1P0CZ17 362 aa3.31□□□□□ -1.88
PTM1YKL039W BUD23P25627 275 aaPredicted RBP3.31□□□□□ -1.88
PTM1YKL039W ZIP1P31111 875 aa3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms