RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIM1	YIL123W	RPS18A	P0CX55	146 aa	Known RBP	10.15	□□□□□ -0.79
SIM1	YIL123W	RPS18B	P0CX56	146 aa	Predicted RBP	10.15	□□□□□ -0.79
SIM1	YIL123W	CDC26	P14724	124 aa		10.15	□□□□□ -0.79
SIM1	YIL123W	GAS1	P22146	559 aa	Known RBP	10.15	□□□□□ -0.79
SIM1	YIL123W	LST4	P34239	828 aa		10.15	□□□□□ -0.79
SIM1	YIL123W	CLG1	P35190	452 aa		10.15	□□□□□ -0.79
SIM1	YIL123W	YHR180W	P38868	163 aa		10.15	□□□□□ -0.79
SIM1	YIL123W	MSS4	P38994	779 aa		10.15	□□□□□ -0.79
SIM1	YIL123W	FAA3	P39002	694 aa		10.15	□□□□□ -0.79
SIM1	YIL123W	YER184C	P39961	794 aa		10.15	□□□□□ -0.79
SIM1	YIL123W	POP1	P41812	875 aa		10.15	□□□□□ -0.79
SIM1	YIL123W	BNA6	P43619	295 aa		10.15	□□□□□ -0.79
SIM1	YIL123W	SAY1	P53324	424 aa		10.15	□□□□□ -0.79
SIM1	YIL123W	DCR2	Q05924	578 aa		10.15	□□□□□ -0.79
SIM1	YIL123W	SEI1	Q06058	285 aa		10.15	□□□□□ -0.79
SIM1	YIL123W	MRPL51	Q06090	140 aa	Predicted RBP	10.15	□□□□□ -0.79
SIM1	YIL123W	BAG7	Q12128	409 aa		10.15	□□□□□ -0.79
SIM1	YIL123W	PRP46	Q12417	451 aa	Predicted RBP	10.15	□□□□□ -0.79
SIM1	YIL123W	CDC9	P04819	755 aa		10.14	□□□□□ -0.79
SIM1	YIL123W	PET54	P10834	293 aa		10.14	□□□□□ -0.79
SIM1	YIL123W	RPB8	P20436	146 aa		10.14	□□□□□ -0.79
SIM1	YIL123W	HYM1	P32464	399 aa		10.14	□□□□□ -0.79
SIM1	YIL123W	HSP150	P32478	413 aa		10.14	□□□□□ -0.79
SIM1	YIL123W	HPA3	P39979	161 aa		10.14	□□□□□ -0.79
SIM1	YIL123W	DOC1	P53068	250 aa		10.14	□□□□□ -0.79
SIM1	YIL123W	NAM8	Q00539	523 aa	Known RBP	10.14	□□□□□ -0.79
SIM1	YIL123W	MRPL13	Q02204	264 aa		10.14	□□□□□ -0.79
SIM1	YIL123W	RBS1	Q05672	457 aa	Known RBP	10.14	□□□□□ -0.79
SIM1	YIL123W	HFA1	P32874	2273 aa		10.13	□□□□□ -0.79
SIM1	YIL123W	GPM1	P00950	247 aa	Known RBP	10.13	□□□□□ -0.79
SIM1	YIL123W	SFK1	P35735	353 aa		10.13	□□□□□ -0.79
SIM1	YIL123W	PEX32	P38292	413 aa		10.13	□□□□□ -0.79
SIM1	YIL123W	BAP3	P41815	604 aa		10.13	□□□□□ -0.79
SIM1	YIL123W	CUZ1	P53899	274 aa		10.13	□□□□□ -0.79
SIM1	YIL123W	TSR2	Q06672	205 aa	Known RBP	10.13	□□□□□ -0.79
SIM1	YIL123W	YOR378W	Q08902	515 aa		10.13	□□□□□ -0.79
SIM1	YIL123W	YOR343C	Q12484	108 aa		10.13	□□□□□ -0.79
SIM1	YIL123W	YIL046W-A	Q3E7Z4	54 aa		10.13	□□□□□ -0.79
SIM1	YIL123W	AIM17	P23180	465 aa	Known RBP	10.12	□□□□□ -0.79
SIM1	YIL123W	KRE6	P32486	720 aa		10.12	□□□□□ -0.79
SIM1	YIL123W	BOL3	P39724	118 aa		10.12	□□□□□ -0.79
SIM1	YIL123W	CCC1	P47818	322 aa		10.12	□□□□□ -0.79
SIM1	YIL123W	YGL204C	P53089	101 aa		10.12	□□□□□ -0.79
SIM1	YIL123W	SSY1	Q03770	852 aa		10.12	□□□□□ -0.79
SIM1	YIL123W	LUC7	Q07508	261 aa	Predicted RBP	10.12	□□□□□ -0.79
SIM1	YIL123W	BDS1	Q08347	646 aa		10.12	□□□□□ -0.79
SIM1	YIL123W	HNT3	Q08702	217 aa		10.12	□□□□□ -0.79
SIM1	YIL123W	TOR2	P32600	2474 aa	Known RBP	10.12	□□□□□ -0.79
SIM1	YIL123W	PPQ1	P32945	549 aa		10.11	□□□□□ -0.79
SIM1	YIL123W	YBR242W	P38331	238 aa		10.11	□□□□□ -0.79
SIM1	YIL123W	AAD14	P42884	376 aa		10.11	□□□□□ -0.79
SIM1	YIL123W	DUG1	P43616	481 aa	Known RBP	10.11	□□□□□ -0.79
SIM1	YIL123W	DPB11	P47027	764 aa	Predicted RBP	10.11	□□□□□ -0.79
SIM1	YIL123W	DIE2	P50076	525 aa		10.11	□□□□□ -0.79
SIM1	YIL123W	MRPS16	Q02608	121 aa		10.11	□□□□□ -0.79
SIM1	YIL123W	SNX41	Q04053	625 aa		10.11	□□□□□ -0.79
SIM1	YIL123W	SOD2	P00447	233 aa		10.1	□□□□□ -0.79
SIM1	YIL123W	RPL6B	P05739	176 aa	Known RBP	10.1	□□□□□ -0.79
SIM1	YIL123W	PEP4	P07267	405 aa	Known RBP	10.1	□□□□□ -0.79
SIM1	YIL123W	YCR102C	P25608	368 aa		10.1	□□□□□ -0.79
SIM1	YIL123W	ERG9	P29704	444 aa		10.1	□□□□□ -0.79
SIM1	YIL123W	ITR1	P30605	584 aa		10.1	□□□□□ -0.79
SIM1	YIL123W	PRE4	P30657	266 aa		10.1	□□□□□ -0.79
SIM1	YIL123W	HTD2	P38790	280 aa	Known RBP	10.1	□□□□□ -0.79
SIM1	YIL123W	NAS2	P40555	220 aa		10.1	□□□□□ -0.79
SIM1	YIL123W	YMR130W	Q04223	302 aa		10.1	□□□□□ -0.79
SIM1	YIL123W	IRC19	Q07843	230 aa		10.1	□□□□□ -0.79
SIM1	YIL123W	ENV7	Q12003	364 aa		10.1	□□□□□ -0.79
SIM1	YIL123W	STF2	P16965	84 aa		10.09	□□□□□ -0.79
SIM1	YIL123W	DAL82	P21705	255 aa		10.09	□□□□□ -0.79
SIM1	YIL123W	STE50	P25344	346 aa		10.09	□□□□□ -0.79
SIM1	YIL123W	ATG22	P25568	528 aa		10.09	□□□□□ -0.79
SIM1	YIL123W	EHD3	P28817	500 aa		10.09	□□□□□ -0.79
SIM1	YIL123W	SDS24	P38314	527 aa		10.09	□□□□□ -0.79
SIM1	YIL123W	YJR120W	P47157	116 aa		10.09	□□□□□ -0.79
SIM1	YIL123W	APM1	Q00776	475 aa	Predicted RBP	10.09	□□□□□ -0.79
SIM1	YIL123W	YDR249C	Q03787	373 aa		10.09	□□□□□ -0.79
SIM1	YIL123W	AIM36	Q03798	255 aa		10.09	□□□□□ -0.79
SIM1	YIL123W	SSK1	Q07084	712 aa		10.09	□□□□□ -0.79
SIM1	YIL123W	YRA1	Q12159	226 aa	Known RBP	10.09	□□□□□ -0.79
SIM1	YIL123W	ADK1	P07170	222 aa	Known RBP	10.08	□□□□□ -0.8
SIM1	YIL123W	SPS2	P08459	502 aa		10.08	□□□□□ -0.8
SIM1	YIL123W	PDA1	P16387	420 aa	Known RBP	10.08	□□□□□ -0.8
SIM1	YIL123W	SCO1	P23833	295 aa		10.08	□□□□□ -0.8
SIM1	YIL123W	ATS1	P31386	333 aa		10.08	□□□□□ -0.8
SIM1	YIL123W	ERG24	P32462	438 aa	Known RBP	10.08	□□□□□ -0.8
SIM1	YIL123W	SEF1	P34228	1148 aa		10.08	□□□□□ -0.8
SIM1	YIL123W	UTP30	P36144	274 aa	Known RBP	10.08	□□□□□ -0.8
SIM1	YIL123W	CHS7	P38843	316 aa		10.08	□□□□□ -0.8
SIM1	YIL123W	CUP9	P41817	306 aa		10.08	□□□□□ -0.8
SIM1	YIL123W	ORM1	P53224	222 aa		10.08	□□□□□ -0.8
SIM1	YIL123W	SCS7	Q03529	384 aa		10.08	□□□□□ -0.8
SIM1	YIL123W	PEX30	Q06169	523 aa		10.08	□□□□□ -0.8
SIM1	YIL123W	NMA1	Q06178	401 aa	Known RBP	10.08	□□□□□ -0.8
SIM1	YIL123W	HAA1	Q12753	694 aa	Known RBP	10.08	□□□□□ -0.8
SIM1	YIL123W	OPI3	P05375	206 aa		10.07	□□□□□ -0.8
SIM1	YIL123W	RPL17A	P05740	184 aa	Known RBP	10.07	□□□□□ -0.8
SIM1	YIL123W	PUP1	P25043	261 aa		10.07	□□□□□ -0.8
SIM1	YIL123W	THI4	P32318	326 aa		10.07	□□□□□ -0.8
SIM1	YIL123W	PKP1	P40530	394 aa		10.07	□□□□□ -0.8

Retrieved 100 of 5,963 RNA–protein pairs in 8788.5 ms