RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C RCF1Q03713 159 aa1.6□□□□□ -2.15
SNU56YDR240C LAG2Q92325 660 aa1.6□□□□□ -2.15
SNU56YDR240C TAL1P15019 335 aaKnown RBP1.59□□□□□ -2.15
SNU56YDR240C YFL040WP43562 540 aa1.59□□□□□ -2.15
SNU56YDR240C PRR2Q12310 699 aa1.59□□□□□ -2.15
SNU56YDR240C GPX1P36014 167 aa1.58□□□□□ -2.16
SNU56YDR240C YHR035WP38769 630 aa1.58□□□□□ -2.16
SNU56YDR240C SYS1P41544 203 aa1.58□□□□□ -2.16
SNU56YDR240C IRC4Q03036 179 aa1.58□□□□□ -2.16
SNU56YDR240C BUR2Q05949 395 aa1.58□□□□□ -2.16
SNU56YDR240C DCP1Q12517 231 aaPredicted RBP1.58□□□□□ -2.16
SNU56YDR240C YAL063C-AQ3E791 96 aa1.58□□□□□ -2.16
SNU56YDR240C RNR2P09938 399 aaKnown RBP1.57□□□□□ -2.16
SNU56YDR240C RRT12P25381 491 aa1.57□□□□□ -2.16
SNU56YDR240C LAS1P36146 502 aaPredicted RBP1.57□□□□□ -2.16
SNU56YDR240C CAJ1P39101 391 aa1.57□□□□□ -2.16
SNU56YDR240C INA22P40576 216 aa1.57□□□□□ -2.16
SNU56YDR240C MIG2P53035 382 aa1.57□□□□□ -2.16
SNU56YDR240C CUE3P53137 624 aaKnown RBP1.57□□□□□ -2.16
SNU56YDR240C YGR266WP53326 701 aa1.57□□□□□ -2.16
SNU56YDR240C CGI121Q03705 181 aaKnown RBP1.57□□□□□ -2.16
SNU56YDR240C SNX41Q04053 625 aa1.57□□□□□ -2.16
SNU56YDR240C YLR446WQ06204 433 aa1.57□□□□□ -2.16
SNU56YDR240C PLB3Q08108 686 aa1.57□□□□□ -2.16
SNU56YDR240C TY3A-GQ12173 290 aa1.57□□□□□ -2.16
SNU56YDR240C TY3A-IQ99219 290 aa1.57□□□□□ -2.16
SNU56YDR240C HIS3P06633 220 aa1.56□□□□□ -2.16
SNU56YDR240C PHO80P20052 293 aa1.56□□□□□ -2.16
SNU56YDR240C MCH2P36032 473 aa1.56□□□□□ -2.16
SNU56YDR240C YER188WP40103 239 aa1.56□□□□□ -2.16
SNU56YDR240C YJR141WP47172 347 aaPredicted RBP1.56□□□□□ -2.16
SNU56YDR240C ALG9P53868 555 aaKnown RBP1.56□□□□□ -2.16
SNU56YDR240C YDL144CQ07589 356 aa1.56□□□□□ -2.16
SNU56YDR240C UTP23Q12339 254 aaKnown RBP1.56□□□□□ -2.16
SNU56YDR240C RPL26AP05743 127 aaKnown RBP1.56□□□□□ -2.16
SNU56YDR240C CDC13P32797 924 aaKnown RBP1.56□□□□□ -2.16
SNU56YDR240C MRPL3P36516 390 aa1.56□□□□□ -2.16
SNU56YDR240C TRM7P38238 310 aaKnown RBP1.56□□□□□ -2.16
SNU56YDR240C AVT6P40074 448 aa1.56□□□□□ -2.16
SNU56YDR240C PRP24P49960 444 aaKnown RBP1.56□□□□□ -2.16
SNU56YDR240C RPL26BP53221 127 aaKnown RBP1.56□□□□□ -2.16
SNU56YDR240C YGR168CP53293 376 aa1.56□□□□□ -2.16
SNU56YDR240C TVP15Q03860 143 aa1.56□□□□□ -2.16
SNU56YDR240C NNT1Q05874 261 aa1.56□□□□□ -2.16
SNU56YDR240C YPL278CQ08990 100 aa1.56□□□□□ -2.16
SNU56YDR240C POT1P27796 417 aaKnown RBP RIP-Chip data1.55□□□□□ -2.16not detected
SNU56YDR240C YEL043WP32618 956 aa1.55□□□□□ -2.16
SNU56YDR240C SIF2P38262 535 aa1.55□□□□□ -2.16
SNU56YDR240C LIN1P38852 340 aaPredicted RBP1.55□□□□□ -2.16
SNU56YDR240C BAT2P47176 376 aaKnown RBP1.55□□□□□ -2.16
SNU56YDR240C PDR16P53860 351 aaKnown RBP1.55□□□□□ -2.16
SNU56YDR240C VPS68Q12016 184 aa1.55□□□□□ -2.16
SNU56YDR240C ZRT1P32804 376 aa1.54□□□□□ -2.16
SNU56YDR240C TPO5P36029 618 aa1.54□□□□□ -2.16
SNU56YDR240C MBA1P38300 278 aa1.54□□□□□ -2.16
SNU56YDR240C YIL012WP40551 113 aa1.54□□□□□ -2.16
SNU56YDR240C OKP1P53298 406 aa1.54□□□□□ -2.16
SNU56YDR240C SSU72P53538 206 aaPredicted RBP1.54□□□□□ -2.16
SNU56YDR240C BIO4P53630 237 aa1.54□□□□□ -2.16
SNU56YDR240C GAL7P08431 366 aa1.53□□□□□ -2.16
SNU56YDR240C OSM1P21375 501 aaKnown RBP1.53□□□□□ -2.16
SNU56YDR240C IMP1P28627 190 aa1.53□□□□□ -2.16
SNU56YDR240C KRE29P40026 464 aa1.53□□□□□ -2.16
SNU56YDR240C UTP25P40498 721 aaKnown RBP1.53□□□□□ -2.16
SNU56YDR240C DSK2P48510 373 aa1.53□□□□□ -2.16
SNU56YDR240C NFI1Q12216 726 aa1.53□□□□□ -2.16
SNU56YDR240C ADH3P07246 375 aaKnown RBP1.52□□□□□ -2.17
SNU56YDR240C SCO1P23833 295 aa1.52□□□□□ -2.17
SNU56YDR240C VAB2P40003 282 aa1.52□□□□□ -2.17
SNU56YDR240C UBC13P52490 153 aa1.52□□□□□ -2.17
SNU56YDR240C SWC4P53201 476 aa1.52□□□□□ -2.17
SNU56YDR240C MYO5Q04439 1219 aaKnown RBP1.52□□□□□ -2.17
SNU56YDR240C YLL007CQ07799 665 aa1.52□□□□□ -2.17
SNU56YDR240C RPL18AP0CX49 186 aaKnown RBP1.51□□□□□ -2.17
SNU56YDR240C RPL18BP0CX50 186 aaKnown RBP1.51□□□□□ -2.17
SNU56YDR240C RPL16BP26785 198 aaKnown RBP1.51□□□□□ -2.17
SNU56YDR240C VPH1P32563 840 aaKnown RBP1.51□□□□□ -2.17
SNU56YDR240C IMP3P32899 183 aaPredicted RBP1.51□□□□□ -2.17
SNU56YDR240C YBR062CP38239 180 aa1.51□□□□□ -2.17
SNU56YDR240C PIR5P46999 287 aa1.51□□□□□ -2.17
SNU56YDR240C SPO77Q06134 477 aa1.51□□□□□ -2.17
SNU56YDR240C PML1Q07930 204 aaPredicted RBP1.51□□□□□ -2.17
SNU56YDR240C IZH4Q99393 312 aa1.51□□□□□ -2.17
SNU56YDR240C GAL3P13045 520 aa1.5□□□□□ -2.17
SNU56YDR240C YCR025CP25352 136 aa1.5□□□□□ -2.17
SNU56YDR240C NRG2P38082 220 aa1.5□□□□□ -2.17
SNU56YDR240C SPL2P38839 148 aa1.5□□□□□ -2.17
SNU56YDR240C SUR2P38992 349 aa1.5□□□□□ -2.17
SNU56YDR240C OST3P48439 350 aa1.5□□□□□ -2.17
SNU56YDR240C RTC5Q12108 567 aaKnown RBP1.5□□□□□ -2.17
SNU56YDR240C ATG5Q12380 294 aa1.5□□□□□ -2.17
SNU56YDR240C AGC1Q12482 902 aa1.5□□□□□ -2.17
SNU56YDR240C DPM1P14020 267 aaKnown RBP1.5□□□□□ -2.17
SNU56YDR240C MSS116P15424 664 aaKnown RBP1.5□□□□□ -2.17
SNU56YDR240C YKL162CP36052 402 aa1.5□□□□□ -2.17
SNU56YDR240C YHR045WP38775 560 aa1.5□□□□□ -2.17
SNU56YDR240C POP2P39008 433 aa1.5□□□□□ -2.17
SNU56YDR240C MPP10P47083 593 aaKnown RBP1.5□□□□□ -2.17
SNU56YDR240C PSY3Q12318 242 aa1.5□□□□□ -2.17
SNU56YDR240C UIP5P36137 443 aa1.49□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 142.2 ms