RNA–Protein interactions for RNA: YDR108W

TRS85, Transcript of Component of transport protein particle (TRAPP) complex III, yeastyeast

Gene TRS85, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS85YDR108W YSA1Q01976 231 aa3.9□□□□□ -1.79
TRS85YDR108W TOF2Q02208 771 aa3.9□□□□□ -1.79
TRS85YDR108W YMR155WQ03795 547 aa3.9□□□□□ -1.79
TRS85YDR108W TY1A-DR2Q03964 440 aaKnown RBP3.9□□□□□ -1.79
TRS85YDR108W GMC1Q04399 608 aa3.9□□□□□ -1.79
TRS85YDR108W YLR225CQ05948 407 aaKnown RBP3.9□□□□□ -1.79
TRS85YDR108W ANT1Q06497 328 aa3.9□□□□□ -1.79
TRS85YDR108W YOL131WQ08270 108 aa3.9□□□□□ -1.79
TRS85YDR108W YNR034W-AQ3E841 98 aa3.9□□□□□ -1.79
TRS85YDR108W COX2P00410 251 aa3.89□□□□□ -1.79
TRS85YDR108W YOL163WP0CF20 169 aa3.89□□□□□ -1.79
TRS85YDR108W MDH1P17505 334 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
TRS85YDR108W PER1P25625 357 aa3.89□□□□□ -1.79
TRS85YDR108W DOA1P36037 715 aa3.89□□□□□ -1.79
TRS85YDR108W YKL075CP36083 450 aa3.89□□□□□ -1.79
TRS85YDR108W YHL041WP38730 149 aa3.89□□□□□ -1.79
TRS85YDR108W ALP1P38971 573 aa3.89□□□□□ -1.79
TRS85YDR108W LSM5P40089 93 aaKnown RBP3.89□□□□□ -1.79
TRS85YDR108W RFC4P40339 323 aaKnown RBP3.89□□□□□ -1.79
TRS85YDR108W PRM2P40534 656 aa3.89□□□□□ -1.79
TRS85YDR108W LCB2P40970 561 aa3.89□□□□□ -1.79
TRS85YDR108W PMT6P42934 759 aa3.89□□□□□ -1.79
TRS85YDR108W YGL114WP53134 725 aa3.89□□□□□ -1.79
TRS85YDR108W PEX31P53203 462 aa3.89□□□□□ -1.79
TRS85YDR108W BUD17P53727 317 aa3.89□□□□□ -1.79
TRS85YDR108W YNL184CP53876 108 aa3.89□□□□□ -1.79
TRS85YDR108W YNL181WP53878 407 aa3.89□□□□□ -1.79
TRS85YDR108W ALG11P53954 548 aaKnown RBP3.89□□□□□ -1.79
TRS85YDR108W GPI15P53961 229 aa3.89□□□□□ -1.79
TRS85YDR108W DIA1P54005 336 aa3.89□□□□□ -1.79
TRS85YDR108W CYT2Q00873 224 aa3.89□□□□□ -1.79
TRS85YDR108W VPS28Q02767 242 aa3.89□□□□□ -1.79
TRS85YDR108W DOT1Q04089 582 aaKnown RBP3.89□□□□□ -1.79
TRS85YDR108W YDR391CQ04170 232 aa3.89□□□□□ -1.79
TRS85YDR108W ATG39Q06159 398 aa3.89□□□□□ -1.79
TRS85YDR108W CTF3Q12748 733 aa3.89□□□□□ -1.79
TRS85YDR108W HTS1P07263 546 aaKnown RBP3.88□□□□□ -1.79
TRS85YDR108W RPL35AP0CX84 120 aaKnown RBP3.88□□□□□ -1.79
TRS85YDR108W RPL35BP0CX85 120 aaKnown RBP3.88□□□□□ -1.79
TRS85YDR108W NHP6BP11633 99 aaKnown RBP3.88□□□□□ -1.79
TRS85YDR108W GCY1P14065 312 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79 RIP-Chip
TRS85YDR108W SNF5P18480 905 aa3.88□□□□□ -1.79
TRS85YDR108W CDC42P19073 191 aa3.88□□□□□ -1.79
TRS85YDR108W BUD5P25300 642 aaPredicted RBP3.88□□□□□ -1.79
TRS85YDR108W ELO2P25358 347 aa3.88□□□□□ -1.79
TRS85YDR108W RER1P25560 188 aa3.88□□□□□ -1.79
TRS85YDR108W SYN8P31377 255 aa3.88□□□□□ -1.79
TRS85YDR108W BCS1P32839 456 aa3.88□□□□□ -1.79
TRS85YDR108W SFC1P33303 322 aa3.88□□□□□ -1.79
TRS85YDR108W ADD66P36040 267 aa3.88□□□□□ -1.79
TRS85YDR108W FAT1P38225 669 aa3.88□□□□□ -1.79
TRS85YDR108W MUP3P38734 546 aa3.88□□□□□ -1.79
TRS85YDR108W RPF1P38805 295 aaKnown RBP3.88□□□□□ -1.79
TRS85YDR108W PNT1P38969 423 aa3.88□□□□□ -1.79
TRS85YDR108W GCV3P39726 170 aaPredicted RBP3.88□□□□□ -1.79
TRS85YDR108W ELO3P40319 345 aa3.88□□□□□ -1.79
TRS85YDR108W ARG2P40360 574 aa3.88□□□□□ -1.79
TRS85YDR108W YFL012WP43580 148 aa3.88□□□□□ -1.79
TRS85YDR108W IRC7P43623 340 aa3.88□□□□□ -1.79
TRS85YDR108W NET1P47035 1189 aa3.88□□□□□ -1.79
TRS85YDR108W GCV1P48015 400 aa3.88□□□□□ -1.79
TRS85YDR108W ASN2P49090 572 aaKnown RBP3.88□□□□□ -1.79
TRS85YDR108W MDM34P53083 459 aa3.88□□□□□ -1.79
TRS85YDR108W YGR126WP53274 230 aa3.88□□□□□ -1.79
TRS85YDR108W RHO4Q00246 291 aa3.88□□□□□ -1.79
TRS85YDR108W CDC55Q00362 526 aa3.88□□□□□ -1.79
TRS85YDR108W APM1Q00776 475 aaPredicted RBP3.88□□□□□ -1.79
TRS85YDR108W CSM3Q04659 317 aa3.88□□□□□ -1.79
TRS85YDR108W TPO3Q06451 622 aa3.88□□□□□ -1.79
TRS85YDR108W ATG10Q07879 167 aa3.88□□□□□ -1.79
TRS85YDR108W LEA1Q08963 238 aaPredicted RBP3.88□□□□□ -1.79
TRS85YDR108W RDL1Q12305 139 aaKnown RBP3.88□□□□□ -1.79
TRS85YDR108W ATG5Q12380 294 aa3.88□□□□□ -1.79
TRS85YDR108W ERP3Q12403 225 aa3.88□□□□□ -1.79
TRS85YDR108W AHA1Q12449 350 aaKnown RBP3.88□□□□□ -1.79
TRS85YDR108W SKS1Q12505 502 aa3.88□□□□□ -1.79
TRS85YDR108W YMR030W-AQ3E760 96 aa3.88□□□□□ -1.79
TRS85YDR108W SLO1Q3E784 85 aa3.88□□□□□ -1.79
TRS85YDR108W MHF2Q3E829 80 aa3.88□□□□□ -1.79
TRS85YDR108W RPS9AO13516 197 aaKnown RBP3.88□□□□□ -1.79
TRS85YDR108W RPS9BP05755 195 aaKnown RBP3.88□□□□□ -1.79
TRS85YDR108W ART10P18634 518 aaKnown RBP3.88□□□□□ -1.79
TRS85YDR108W NUP1P20676 1076 aa3.88□□□□□ -1.79
TRS85YDR108W VBA3P25594 458 aa3.88□□□□□ -1.79
TRS85YDR108W PHO91P27514 894 aa3.88□□□□□ -1.79
TRS85YDR108W URA10P30402 227 aa3.88□□□□□ -1.79
TRS85YDR108W HOM6P31116 359 aaKnown RBP3.88□□□□□ -1.79
TRS85YDR108W TRS65P32893 560 aa3.88□□□□□ -1.79
TRS85YDR108W YKL151CP36059 337 aa3.88□□□□□ -1.79
TRS85YDR108W MRPL11P36521 249 aaPredicted RBP3.88□□□□□ -1.79
TRS85YDR108W YBR096WP38256 230 aa3.88□□□□□ -1.79
TRS85YDR108W YPC1P38298 316 aa3.88□□□□□ -1.79
TRS85YDR108W DBP8P38719 431 aa3.88□□□□□ -1.79
TRS85YDR108W YHR122WP38829 231 aa3.88□□□□□ -1.79
TRS85YDR108W SMB1P40018 196 aaKnown RBP3.88□□□□□ -1.79
TRS85YDR108W GPP2P40106 250 aaKnown RBP3.88□□□□□ -1.79
TRS85YDR108W FMC1P40491 155 aa3.88□□□□□ -1.79
TRS85YDR108W BMT5P40493 336 aa3.88□□□□□ -1.79
TRS85YDR108W GDS1P41913 522 aa3.88□□□□□ -1.79
TRS85YDR108W QRI7P43122 407 aa3.88□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 47 ms