RNA–Protein interactions for RNA: YDL140C

RPO21, Transcript of RNA polymerase II largest subunit B220, yeast

Gene RPO21, Length 5,202 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPO21	YDL140C	AAC1	P04710	309 aa		3.48	□□□□□ -1.85
RPO21	YDL140C	RAD52	P06778	471 aa	Known RBP	3.48	□□□□□ -1.85
RPO21	YDL140C	COQ3	P27680	312 aa		3.48	□□□□□ -1.85
RPO21	YDL140C	SIP1	P32578	815 aa		3.48	□□□□□ -1.85
RPO21	YDL140C	MGM101	P32787	269 aa	Known RBP	3.48	□□□□□ -1.85
RPO21	YDL140C	ICS2	P38284	255 aa		3.48	□□□□□ -1.85
RPO21	YDL140C	BUD9	P53226	547 aa		3.48	□□□□□ -1.85
RPO21	YDL140C	YGR126W	P53274	230 aa		3.48	□□□□□ -1.85
RPO21	YDL140C	PIR3	Q03180	325 aa		3.48	□□□□□ -1.85
RPO21	YDL140C	RSM24	Q03976	319 aa		3.48	□□□□□ -1.85
RPO21	YDL140C	CTS2	Q06350	511 aa		3.48	□□□□□ -1.85
RPO21	YDL140C	FEX1	Q08913	375 aa		3.48	□□□□□ -1.85
RPO21	YDL140C	GPM1	P00950	247 aa	Known RBP	3.48	□□□□□ -1.85
RPO21	YDL140C	RHO2	P06781	192 aa		3.48	□□□□□ -1.85
RPO21	YDL140C	GCR1	P07261	785 aa		3.48	□□□□□ -1.85
RPO21	YDL140C	RPL24B	P24000	155 aa	Known RBP	3.48	□□□□□ -1.85
RPO21	YDL140C	ATG15	P25641	520 aa		3.48	□□□□□ -1.85
RPO21	YDL140C	SPO23	P33757	523 aa		3.48	□□□□□ -1.85
RPO21	YDL140C	YBR285W	P38354	144 aa		3.48	□□□□□ -1.85
RPO21	YDL140C	NSG1	P38837	291 aa		3.48	□□□□□ -1.85
RPO21	YDL140C	RFC4	P40339	323 aa	Known RBP	3.48	□□□□□ -1.85
RPO21	YDL140C	LSB3	P43603	459 aa	Known RBP	3.48	□□□□□ -1.85
RPO21	YDL140C	COX18	P53239	316 aa		3.48	□□□□□ -1.85
RPO21	YDL140C	BUD17	P53727	317 aa		3.48	□□□□□ -1.85
RPO21	YDL140C	EAF3	Q12432	401 aa		3.48	□□□□□ -1.85
RPO21	YDL140C	RPS13	P05756	151 aa	Known RBP	3.47	□□□□□ -1.85
RPO21	YDL140C	SPO11	P23179	398 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	GPI12	P23797	304 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	GIT1	P25346	518 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	ACB1	P31787	87 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	RNP1	P32385	249 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	UTP11	P34247	250 aa	Predicted RBP	3.47	□□□□□ -1.85
RPO21	YDL140C	BNA4	P38169	460 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	IPI3	P53877	555 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	FMP41	P53889	259 aa	Known RBP	3.47	□□□□□ -1.85
RPO21	YDL140C	YDC1	Q02896	317 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	GAL83	Q04739	417 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	NIP7	Q08962	181 aa	Known RBP	3.47	□□□□□ -1.85
RPO21	YDL140C	TMS1	Q12116	473 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	DBF2	P22204	572 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	PHO3	P24031	467 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	BUB2	P26448	306 aa	Predicted RBP	3.47	□□□□□ -1.85
RPO21	YDL140C	IDH2	P28241	369 aa	Known RBP	3.47	□□□□□ -1.85
RPO21	YDL140C	CTS1	P29029	562 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	APE2	P32454	952 aa	Known RBP	3.47	□□□□□ -1.85
RPO21	YDL140C	SET5	P38890	526 aa	Known RBP	3.47	□□□□□ -1.85
RPO21	YDL140C	SNL1	P40548	159 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	RPE1	P46969	238 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	HMS2	P47175	358 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	SGF73	P53165	657 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	ICT1	Q12385	394 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	ISA2	Q12425	185 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	RPS21A	P0C0V8	87 aa	Known RBP	3.47	□□□□□ -1.85
RPO21	YDL140C	YEL076C-A	P0CX16	216 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	YLR464W	P0CX17	216 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	PRE2	P30656	287 aa	Known RBP	3.47	□□□□□ -1.85
RPO21	YDL140C	SOR1	P35497	357 aa	Known RBP	3.47	□□□□□ -1.85
RPO21	YDL140C	LAS1	P36146	502 aa	Predicted RBP	3.47	□□□□□ -1.85
RPO21	YDL140C	GDI1	P39958	451 aa	Known RBP	3.47	□□□□□ -1.85
RPO21	YDL140C	YEL076C	P39971	216 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	PEP8	P40335	379 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	SOL1	P50278	321 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	HRI1	Q05905	244 aa	Known RBP	3.47	□□□□□ -1.85
RPO21	YDL140C	SOR2	Q07786	357 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	LOT6	Q07923	191 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	3.47	□□□□□ -1.85	not detected
RPO21	YDL140C	PET494	P07390	489 aa	Predicted RBP	3.47	□□□□□ -1.85
RPO21	YDL140C	MTH1	P35198	433 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	RRT1	P38192	103 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3.47	□□□□□ -1.85	not detected
RPO21	YDL140C	BAT2	P47176	376 aa	Known RBP	3.47	□□□□□ -1.85
RPO21	YDL140C	DAM1	P53267	343 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	YPL077C	Q02831	240 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	YPR196W	Q06595	470 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	RBD2	Q12270	262 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	HIS3	P06633	220 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	RAD10	P06838	210 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	BGL2	P15703	313 aa	Known RBP	3.47	□□□□□ -1.85
RPO21	YDL140C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	3.47	□□□□□ -1.85	not detected
RPO21	YDL140C	DGR2	P32330	852 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	CAT2	P32796	670 aa	Known RBP	3.47	□□□□□ -1.85
RPO21	YDL140C	YBR144C	P34215	104 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	AHP1	P38013	176 aa	Known RBP	3.47	□□□□□ -1.85
RPO21	YDL140C	SIC1	P38634	284 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	PAC2	P39937	518 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	IRC22	P40006	225 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	SIP18	P50263	79 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	MEP3	P53390	489 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	YDR222W	Q04925	415 aa		3.47	□□□□□ -1.85
RPO21	YDL140C	FLO1	P32768	1537 aa		3.46	□□□□□ -1.85
RPO21	YDL140C	YPR010C-A	A5Z2X5	72 aa		3.46	□□□□□ -1.86
RPO21	YDL140C	ADK1	P07170	222 aa	Known RBP	3.46	□□□□□ -1.86
RPO21	YDL140C	RPS16A	P0CX51	143 aa	Known RBP	3.46	□□□□□ -1.86
RPO21	YDL140C	RPS16B	P0CX52	143 aa	Known RBP	3.46	□□□□□ -1.86
RPO21	YDL140C	RPD3	P32561	433 aa		3.46	□□□□□ -1.86
RPO21	YDL140C	OST1	P41543	476 aa	Known RBP	3.46	□□□□□ -1.86
RPO21	YDL140C	MTO1	P53070	669 aa		3.46	□□□□□ -1.86
RPO21	YDL140C	MPS1	P54199	764 aa		3.46	□□□□□ -1.86
RPO21	YDL140C	PPM1	Q04081	328 aa		3.46	□□□□□ -1.86
RPO21	YDL140C	RNH1	Q04740	348 aa		3.46	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms