RNA–Protein interactions for RNA: YDL130W

RPP1B, Transcript of Ribosomal protein P1 beta, yeastyeast

Gene RPP1B, Length 321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPP1BYDL130W RET2P43621 546 aa13.7□□□□□ -0.22
RPP1BYDL130W SFH5P47008 294 aa13.7□□□□□ -0.22
RPP1BYDL130W NQM1P53228 333 aaPredicted RBP13.7□□□□□ -0.22
RPP1BYDL130W MAL12P53341 584 aa13.7□□□□□ -0.22
RPP1BYDL130W RCE1Q03530 315 aa13.7□□□□□ -0.22
RPP1BYDL130W YLR345WQ06137 509 aa13.7□□□□□ -0.22
RPP1BYDL130W YLR040CQ07988 224 aa13.7□□□□□ -0.22
RPP1BYDL130W BLM10P43583 2143 aa13.69□□□□□ -0.22
RPP1BYDL130W MSW1P04803 379 aa13.69□□□□□ -0.22
RPP1BYDL130W RPS16AP0CX51 143 aaKnown RBP13.69□□□□□ -0.22
RPP1BYDL130W RPS16BP0CX52 143 aaKnown RBP13.69□□□□□ -0.22
RPP1BYDL130W STE50P25344 346 aa13.69□□□□□ -0.22
RPP1BYDL130W YCL002CP25565 263 aa13.69□□□□□ -0.22
RPP1BYDL130W PRP21P32524 280 aaPredicted RBP13.69□□□□□ -0.22
RPP1BYDL130W PPG1P32838 368 aa13.69□□□□□ -0.22
RPP1BYDL130W YME2P32843 850 aa13.69□□□□□ -0.22
RPP1BYDL130W MTR2P34232 184 aaKnown RBP13.69□□□□□ -0.22
RPP1BYDL130W YBR285WP38354 144 aa13.69□□□□□ -0.22
RPP1BYDL130W YIL165CP40446 119 aa13.69□□□□□ -0.22
RPP1BYDL130W AVT7P40501 490 aa13.69□□□□□ -0.22
RPP1BYDL130W YFL051CP43552 160 aa13.69□□□□□ -0.22
RPP1BYDL130W MOB2P43563 287 aa13.69□□□□□ -0.22
RPP1BYDL130W HAS1Q03532 505 aaKnown RBP13.69□□□□□ -0.22
RPP1BYDL130W API2Q04413 109 aa13.69□□□□□ -0.22
RPP1BYDL130W MRPL51Q06090 140 aaPredicted RBP13.69□□□□□ -0.22
RPP1BYDL130W MRL1Q06815 381 aa13.69□□□□□ -0.22
RPP1BYDL130W CNA1P23287 553 aa13.68□□□□□ -0.22
RPP1BYDL130W CDC39P25655 2108 aaKnown RBP13.68□□□□□ -0.22
RPP1BYDL130W HIS6P40545 261 aa13.68□□□□□ -0.22
RPP1BYDL130W IRC5P43610 853 aa13.68□□□□□ -0.22
RPP1BYDL130W SCY1P53009 804 aa13.68□□□□□ -0.22
RPP1BYDL130W RPL6AQ02326 176 aaKnown RBP13.68□□□□□ -0.22
RPP1BYDL130W RRP9Q06506 573 aaKnown RBP13.68□□□□□ -0.22
RPP1BYDL130W PCL9Q12477 304 aa13.68□□□□□ -0.22
RPP1BYDL130W YBR063CP38083 404 aa13.67□□□□□ -0.22
RPP1BYDL130W BUD17P53727 317 aa13.67□□□□□ -0.22
RPP1BYDL130W ACS1Q01574 713 aa13.67□□□□□ -0.22
RPP1BYDL130W IPK1Q06667 281 aa13.67□□□□□ -0.22
RPP1BYDL130W PST2Q12335 198 aaKnown RBP13.67□□□□□ -0.22
RPP1BYDL130W OPI3P05375 206 aa13.66□□□□□ -0.22
RPP1BYDL130W RPL35AP0CX84 120 aaKnown RBP13.66□□□□□ -0.22
RPP1BYDL130W RPL35BP0CX85 120 aaKnown RBP13.66□□□□□ -0.22
RPP1BYDL130W SED4P25365 1065 aa13.66□□□□□ -0.22
RPP1BYDL130W ITR1P30605 584 aa13.66□□□□□ -0.22
RPP1BYDL130W NUP49Q02199 472 aa13.66□□□□□ -0.22
RPP1BYDL130W ACF2Q12168 779 aa13.66□□□□□ -0.22
RPP1BYDL130W RTN2Q12443 393 aa13.66□□□□□ -0.22
RPP1BYDL130W YCL042WP25572 119 aa13.65□□□□□ -0.22
RPP1BYDL130W PRS3P38689 320 aaKnown RBP13.65□□□□□ -0.22
RPP1BYDL130W SLZ1P40167 298 aa13.65□□□□□ -0.22
RPP1BYDL130W MNT4P53745 580 aa13.65□□□□□ -0.22
RPP1BYDL130W GRX5Q02784 150 aa13.65□□□□□ -0.22
RPP1BYDL130W IDP1P21954 428 aaKnown RBP13.64□□□□□ -0.23
RPP1BYDL130W KRR1P25586 316 aaPredicted RBP13.64□□□□□ -0.23
RPP1BYDL130W MRPS5P33759 307 aa13.64□□□□□ -0.23
RPP1BYDL130W EGD2P38879 174 aaKnown RBP13.64□□□□□ -0.23
RPP1BYDL130W SOP4P39543 234 aaPredicted RBP13.64□□□□□ -0.23
RPP1BYDL130W YER084WP40057 128 aa13.64□□□□□ -0.23
RPP1BYDL130W YNL165WP53891 406 aa13.64□□□□□ -0.23
RPP1BYDL130W FIN1Q03898 291 aa13.64□□□□□ -0.23
RPP1BYDL130W YMR315WQ04869 349 aaKnown RBP13.64□□□□□ -0.23
RPP1BYDL130W SYC1Q08553 188 aaPredicted RBP13.64□□□□□ -0.23
RPP1BYDL130W YGR161W-CQ3E744 92 aa13.64□□□□□ -0.23
RPP1BYDL130W RAS1P01119 309 aa13.63□□□□□ -0.23
RPP1BYDL130W YLF2P38746 405 aa13.63□□□□□ -0.23
RPP1BYDL130W YHR035WP38769 630 aa13.63□□□□□ -0.23
RPP1BYDL130W NIT3P49954 291 aa13.63□□□□□ -0.23
RPP1BYDL130W SLD3P53135 668 aa13.63□□□□□ -0.23
RPP1BYDL130W YDR387CQ04162 555 aa13.63□□□□□ -0.23
RPP1BYDL130W NNT1Q05874 261 aa13.63□□□□□ -0.23
RPP1BYDL130W NCE102Q12207 173 aaRIP-Chip data13.63□□□□□ -0.23not detected
RPP1BYDL130W RPS13P05756 151 aaKnown RBP13.62□□□□□ -0.23
RPP1BYDL130W SRP102P36057 244 aaPredicted RBP13.62□□□□□ -0.23
RPP1BYDL130W MDM31P38880 579 aa13.62□□□□□ -0.23
RPP1BYDL130W ECM1P39715 212 aa13.62□□□□□ -0.23
RPP1BYDL130W SIP18P50263 79 aa13.62□□□□□ -0.23
RPP1BYDL130W VOA1P53262 265 aa13.62□□□□□ -0.23
RPP1BYDL130W MCH4Q08268 501 aa13.62□□□□□ -0.23
RPP1BYDL130W SEC16P48415 2195 aaKnown RBP13.62□□□□□ -0.23
RPP1BYDL130W KIN28P06242 306 aa13.61□□□□□ -0.23
RPP1BYDL130W STE18P18852 110 aa13.61□□□□□ -0.23
RPP1BYDL130W YBR220CP38318 560 aa13.61□□□□□ -0.23
RPP1BYDL130W IZH2Q12442 317 aa13.61□□□□□ -0.23
RPP1BYDL130W FPS1P23900 669 aa13.6□□□□□ -0.23
RPP1BYDL130W NDC1P32500 655 aa13.6□□□□□ -0.23
RPP1BYDL130W RPC34P32910 317 aa13.6□□□□□ -0.23
RPP1BYDL130W SUR1P33300 382 aa13.6□□□□□ -0.23
RPP1BYDL130W AIM10P39965 576 aaKnown RBP13.6□□□□□ -0.23
RPP1BYDL130W PDS1P40316 373 aaPredicted RBP13.6□□□□□ -0.23
RPP1BYDL130W TLG1Q03322 224 aa13.6□□□□□ -0.23
RPP1BYDL130W YMR087WQ04299 284 aa13.6□□□□□ -0.23
RPP1BYDL130W AIM6Q07716 390 aa13.6□□□□□ -0.23
RPP1BYDL130W MCT1Q12283 360 aa13.6□□□□□ -0.23
RPP1BYDL130W YBR096WP38256 230 aa13.59□□□□□ -0.23
RPP1BYDL130W SSZ1P38788 538 aaKnown RBP13.59□□□□□ -0.23
RPP1BYDL130W IPT1P38954 527 aa13.59□□□□□ -0.23
RPP1BYDL130W PFS2P42841 465 aaKnown RBP13.59□□□□□ -0.23
RPP1BYDL130W TNA1P53322 534 aa13.59□□□□□ -0.23
RPP1BYDL130W PET191Q02772 108 aa13.59□□□□□ -0.23
RPP1BYDL130W RRI1Q12468 440 aa13.59□□□□□ -0.23
Retrieved 100 of 5,963 RNA–protein pairs in 37.9 ms